Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D02
         (1243 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    24   2.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   3.6  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   8.3  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 314 QKCDLSLVRSCYPRASLQRHPHSRHLRRQ 400
           +KCDL     C  R  LQ    S+H  R+
Sbjct: 82  EKCDLPFNIDCTSRPKLQEPQPSQHCPRK 110


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 180 TIYFVFPMGIPFSEYYFAYTHNVRMYCT 97
           TI FV  +G  +   Y   T+N   YCT
Sbjct: 222 TINFVVLLGDLYVTLYIILTNNQAKYCT 249


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 8.3
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -2

Query: 687 SVGIHLFSYKGTLGRPSPMIGSRIVAFDPP 598
           SVG++   Y  T   P P IG    AF  P
Sbjct: 6   SVGVYGAPYPSTDQNPYPSIGVESSAFYSP 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,056
Number of Sequences: 336
Number of extensions: 4671
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36377394
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)