Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D02
         (1243 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0027 - 225670-225870,225989-226126,226315-226392,226523-22...    32   1.1  
11_01_0027 - 199196-199396,199514-199651,200207-200284,200419-20...    32   1.1  
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194...    31   1.9  
07_03_1174 + 24538522-24538682,24539229-24539430,24539529-245396...    30   3.3  
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273...    30   4.3  

>12_01_0027 -
           225670-225870,225989-226126,226315-226392,226523-226708,
           226853-226945,227797-227863,228660-228964
          Length = 355

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 567 HLVAATEVVESVAGQLFRRQKRNGPL-IKGFQTFLFTTHVGHIRKEVECVV 418
           HLV AT+    V G+ +R  +++GPL +  F   L +  V H   +V  VV
Sbjct: 285 HLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDVGDVV 335


>11_01_0027 -
           199196-199396,199514-199651,200207-200284,200419-200604,
           200754-200846,201665-201731,202374-202675
          Length = 354

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 567 HLVAATEVVESVAGQLFRRQKRNGPL-IKGFQTFLFTTHVGHIRKEVECVV 418
           HLV AT+    V G+ +R  +++GPL +  F   L +  V H   +V  VV
Sbjct: 284 HLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDVGDVV 334


>04_03_1002 - 21617339-21617362,21618476-21618565,21618755-21619432,
            21619536-21619772,21619849-21619896,21619995-21620045,
            21620301-21620426,21620557-21620697,21621165-21621401,
            21622467-21622571,21622812-21622982,21623306-21623380,
            21623754-21623936,21624151-21624297,21624365-21624472,
            21624605-21624709,21625109-21625213,21625322-21625381,
            21625512-21625579,21625876-21625954,21626208-21626267,
            21626445-21626498,21626834-21626886,21627405-21627494,
            21628265-21628362,21628464-21628852
          Length = 1193

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +1

Query: 196  KMNQENESTEVNSENIASTSGVAKNGAAATLVMLKNARDAKMR 324
            ++ +E +  E++S+ +A  S  AK  AAA  V LKN  +   R
Sbjct: 943  RLAEEKDGLEIHSQKLAEESSYAKELAAAAAVELKNLAEEVTR 985


>07_03_1174 +
           24538522-24538682,24539229-24539430,24539529-24539675,
           24539832-24539944,24540580-24540791,24541194-24541258,
           24541581-24541751,24542543-24542887,24542980-24543173,
           24543292-24543448,24543946-24544010,24544166-24544331
          Length = 665

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 862 GFFYTGQGDKTKCFYXDGGLKDWESDDVPWE 954
           G FY  +GD + CF  +G  K + + +VPWE
Sbjct: 212 GSFYPAEGDASYCFIGEGDGKGY-NINVPWE 241


>08_02_0210 +
           14324539-14324609,14324735-14325740,14325838-14327390,
           14327473-14327601,14328345-14328510
          Length = 974

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 631 HRRWAPQCPFVRKQMYANAGGEAAAVGRDECGASAAT 741
           HR  +P+CP   +++  N+  +   +G   C A A+T
Sbjct: 862 HRATSPKCPLNSQKIMKNSDKQGRPLGSTSCAAGAST 898


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,033,494
Number of Sequences: 37544
Number of extensions: 589997
Number of successful extensions: 1662
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3829445508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)