Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D02
         (1243 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical pr...    38   0.015
U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of ap...    38   0.015
Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical pr...    35   0.10 
U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of ap...    35   0.10 
AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical ...    29   6.8  
AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical ...    29   6.8  
AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.    29   6.8  
AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.    29   6.8  

>Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical
           protein C50B8.2 protein.
          Length = 308

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 511 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 663
           T E+LAR GFY     +      C FC +EI  + + DDP   H+  +P C FV
Sbjct: 45  TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97



 Score = 35.1 bits (77), Expect = 0.10
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
 Frame = +1

Query: 484 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 654
           FD+      T ++LA+ G++ +  + D+    C FC VE+  + E DDP  +H++++  C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237

Query: 655 PFVR 666
            F++
Sbjct: 238 DFIK 241



 Score = 33.9 bits (74), Expect = 0.24
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
 Frame = +1

Query: 796 RLATFK----DWPRCMRQKPEELAEAGFF-YTGQGDKT--KCFYXDGGLKDWESDDVPWE 954
           RLATF+    D  R ++   ++LA+AG+F    + DKT  KC +    L   ESDD PWE
Sbjct: 170 RLATFQNFIFDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVELDFDESDD-PWE 228

Query: 955 QHAXWSTA 978
           +H  +S +
Sbjct: 229 EHQKFSAS 236


>U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 308

 Score = 37.9 bits (84), Expect = 0.015
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 511 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 663
           T E+LAR GFY     +      C FC +EI  + + DDP   H+  +P C FV
Sbjct: 45  TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97



 Score = 35.1 bits (77), Expect = 0.10
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
 Frame = +1

Query: 484 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 654
           FD+      T ++LA+ G++ +  + D+    C FC VE+  + E DDP  +H++++  C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237

Query: 655 PFVR 666
            F++
Sbjct: 238 DFIK 241



 Score = 33.9 bits (74), Expect = 0.24
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
 Frame = +1

Query: 796 RLATFK----DWPRCMRQKPEELAEAGFF-YTGQGDKT--KCFYXDGGLKDWESDDVPWE 954
           RLATF+    D  R ++   ++LA+AG+F    + DKT  KC +    L   ESDD PWE
Sbjct: 170 RLATFQNFIFDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVELDFDESDD-PWE 228

Query: 955 QHAXWSTA 978
           +H  +S +
Sbjct: 229 EHQKFSAS 236


>Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical
           protein T27F2.3 protein.
          Length = 155

 Score = 35.1 bits (77), Expect = 0.10
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +1

Query: 442 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 606
           DM      ++RL TF     D+ P    T + +A+ GFY  G     C AFC  E+    
Sbjct: 10  DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68

Query: 607 EGDDPAADHRRWAPQCPFVR 666
           E DDP  +H +    C FVR
Sbjct: 69  E-DDPWYEHTKRDEPCEFVR 87


>U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 155

 Score = 35.1 bits (77), Expect = 0.10
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +1

Query: 442 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 606
           DM      ++RL TF     D+ P    T + +A+ GFY  G     C AFC  E+    
Sbjct: 10  DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68

Query: 607 EGDDPAADHRRWAPQCPFVR 666
           E DDP  +H +    C FVR
Sbjct: 69  E-DDPWYEHTKRDEPCEFVR 87


>AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical
           protein H30A04.1b protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 439 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 537
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical
           protein H30A04.1a protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 439 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 537
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 439 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 537
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 439 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 537
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,583,456
Number of Sequences: 27780
Number of extensions: 470773
Number of successful extensions: 1063
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3443371140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)