Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_D01
(1221 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr ... 140 3e-34
SPCC330.10 |pcm1||mRNA capping methyltransferase|Schizosaccharom... 35 0.020
SPCC162.05 |coq3||hexaprenyldihydroxybenzoate methyltransferase|... 33 0.11
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 33 0.11
SPCC663.10 |||methyltransferase, DUF1613 family |Schizosaccharom... 31 0.25
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 30 0.57
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 29 0.99
SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces po... 29 1.3
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 29 1.3
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 29 1.7
SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual 29 1.7
SPAC4G8.07c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual 28 3.0
SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomy... 27 4.0
SPBC16E9.05 |erg6||delta-sterol C-methyltransferase |Schizosacch... 27 5.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 9.2
>SPBC839.14c |||methyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 238
Score = 140 bits (340), Expect = 3e-34
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 19/211 (9%)
Frame = +1
Query: 220 LDPSVLGTREYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRWICD------CGVDRN 381
L S LGT++YW Y +E+ NF EF D G+VWFGE++ R+++W+ D V
Sbjct: 4 LPESKLGTKQYWDNVYEREVSNFTEFNDEGEVWFGEEAEERIVQWLEDHISTSFREVSEA 63
Query: 382 SP--IIDLGCGNGYTLSELAKEGFT------NLLGVDYCEAAITLARKVA--KQNYPFIN 531
+P ++DLG GNG+ L L +E T L+GVDY EAAI LA+ +A +Q +
Sbjct: 64 APFRVLDLGTGNGHLLFRLLEEEDTLLPSPCQLVGVDYSEAAIVLAKNIARHRQFSDKVK 123
Query: 532 YKLFDITTDDVIALGQYAIVHDKGTYDAIGLNP--IDPKACREKYIEQIHRLLLDEGIFI 705
++ DI D + ++ DKGT+DAI L+ +D + Y++++ +L GIF+
Sbjct: 124 FQQLDIIKDSKFCSKDWDLILDKGTFDAISLSGELLDGRPLNSVYVDRVRGMLSPNGIFL 183
Query: 706 ITSCNWTEEELVKHFSEK-MKLKCVLPTPQF 795
ITSCNWT +EL + F++ + +P P F
Sbjct: 184 ITSCNWTIQELEERFTKNGFIVHSTVPVPVF 214
>SPCC330.10 |pcm1||mRNA capping
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 389
Score = 35.1 bits (77), Expect = 0.020
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 388 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARK 501
++D+GCG G L + K G +G+D E ++ A+K
Sbjct: 143 VLDMGCGKGGDLIKWDKAGIDGYIGIDIAEVSVNQAKK 180
>SPCC162.05 |coq3||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 271
Score = 32.7 bits (71), Expect = 0.11
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Frame = +1
Query: 265 YAKEIRNFDEFGDTGDVWFGEDSALRVIRWICDCGVD--------RN----SPIIDLGCG 408
++ + D F + W+ D R++ + +D RN I+D+GCG
Sbjct: 28 HSVSVNEVDHFNELAKTWWDWDGGSRLLHLMNSTRLDFMTEVFRERNCFSGKKILDIGCG 87
Query: 409 NGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKL 540
G +A+ G ++ VD AI +A+K A + P +N +L
Sbjct: 88 GGILSESMARLG-ASVTAVDASPMAIEVAKKHASLD-PVLNGRL 129
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 32.7 bits (71), Expect = 0.11
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 388 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFD 546
++DLGCG+G +EL + ++G+D I AR++ Y KL D
Sbjct: 37 LLDLGCGDGVLTNELVSQ-CRRVVGIDASPDMIKAARELGLNAYVIPGEKLLD 88
>SPCC663.10 |||methyltransferase, DUF1613 family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 502
Score = 31.5 bits (68), Expect = 0.25
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 256 KEAYAKE-IRNFDEFGDTGDVWFGEDSALRVIR---WICDCGVDRNSPIIDLGCGNGYTL 423
K+ YAK+ + N+ E D G F ED A+ W ++ +D+GCGNG +
Sbjct: 232 KDKYAKQLVDNWVEKTDPGKHVF-EDLAIAAFLIELWKQTYSSNKEFSFVDVGCGNGLLV 290
Query: 424 SELAKEGFTNLLGVD 468
L EG+ N G D
Sbjct: 291 YLLLMEGY-NGYGFD 304
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 30.3 bits (65), Expect = 0.57
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -2
Query: 338 RALSSPNQTSPVSPNSSKFRISLA*ASFQ 252
R SSP T P SP+SSKFR S +SFQ
Sbjct: 693 RNFSSPPFTRPASPSSSKFRFSS--SSFQ 719
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 29.5 bits (63), Expect = 0.99
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = -2
Query: 326 SPNQTSPVSPNSSKFRISLA*ASFQYSRVPSTDGSNSVSSIISTKV*FCNERESLLV 156
+P QTSP P++S+ + S+ P+T ++S ++++ST NE E+ V
Sbjct: 167 NPTQTSPGKPSTSESSQTDTSTRPANSQTPTTTRASSYTTLVSTSNQVSNEAEASAV 223
>SPBC8E4.05c |||fumarate lyase superfamily|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 322 GEDSALRVIRWICDCGVDRNSPIIDLGCGNGYTLSELAKEGFTNLL 459
G D A ++ +C + N P+++L + L+KE T+LL
Sbjct: 382 GRDEAHDLVYRLCHLSIQENKPLVELLLAERQVTNYLSKEEVTSLL 427
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 29.1 bits (62), Expect = 1.3
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -2
Query: 467 STPSRF-VNPSFANSDSV*PFPHPKSMMGLFLSTPQSQIHL-ITRRALSSP-NQTSPV 303
+ PS+F +NPS A S ++ P H KS +S+P S + T A P N SP+
Sbjct: 142 TVPSKFSLNPSVATSTNISPRRHAKSHSVASVSSPNSHNAVPFTPHAFVPPVNNASPL 199
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 376 RNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCE 477
R+ ++D+GCG G A+ G ++ GVD E
Sbjct: 54 RDKIVLDVGCGTGILSMFCARAGAKHVYGVDMSE 87
>SPBC2A9.10 |||Bin3 family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 268
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 388 IIDLGCGNGYTLSELAK-EGFTNLLGVDYCEAAITLARK 501
++D+GC NG +++A G + +LG+D I ARK
Sbjct: 39 VLDIGCNNGTVSAQIASIFGASFVLGLDIDHVLIQKARK 77
>SPAC4G8.07c |||tRNA |Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 27.9 bits (59), Expect = 3.0
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 391 IDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQN 516
+D CG+G S +GF +++GV+ ++ A + AK+N
Sbjct: 380 VDAYCGSGL-FSVACSKGFLSVIGVEISADSVRYAEENAKRN 420
>SPAC19A8.04 |erg5||C-22 sterol desaturase Erg5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 541
Score = 27.5 bits (58), Expect = 4.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 247 EYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRW 354
EYWK A E+ NF VW+G S V+R+
Sbjct: 216 EYWKITAAMELVNFPIVLPFTKVWYGIQSRKVVMRY 251
>SPBC16E9.05 |erg6||delta-sterol C-methyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 367 GVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVA-KQN 516
G+ S ++D+GCG G E+ + NL+G++ + I+ A K+N
Sbjct: 121 GIKPGSRVLDVGCGVGGPAREITEFTGCNLVGLNNNDYQISRCNNYAVKRN 171
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 9.2
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Frame = -2
Query: 560 SSVVMSNNL*LMKG*FCLATFRAKVMAASQ*---STPSRFVNPSFANSDSV*PFPHPKSM 390
SS ++S+++ + L+T+ + V+ +S S+ S V+ S S S P P S+
Sbjct: 646 SSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPSSSSL 705
Query: 389 MGLFLSTPQSQIHLITRRALSSPNQTSPVSPNSSKFRISLA*ASFQYSRVPSTD---GSN 219
+ + ++ + H S + P S NSS I+ + ++ S + S+ S
Sbjct: 706 VSTYSASLSNITHSSLSLTAMSSSSAIPTSVNSSTL-ITASSSNTLLSSITSSSAIVSST 764
Query: 218 SVSSIIS 198
+VS+I S
Sbjct: 765 TVSNISS 771
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,371,104
Number of Sequences: 5004
Number of extensions: 91085
Number of successful extensions: 251
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 661404424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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