Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_D01
(1221 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0130 + 1182504-1182817,1183024-1183152,1183582-1183716,118... 111 1e-24
01_06_0299 + 28305447-28305729,28305892-28306104,28306915-283070... 104 1e-22
05_04_0192 + 18936955-18937168,18937385-18937498,18937588-189376... 56 7e-08
08_02_1260 - 25680618-25680677,25680763-25680893,25681085-256811... 52 1e-06
04_03_0669 + 18531419-18531820,18532589-18532690,18532882-185329... 40 0.005
11_06_0082 + 19891184-19891332,19891349-19891445,19891584-198917... 39 0.007
06_01_0375 + 2699179-2699264,2699697-2699786,2699913-2699991,270... 39 0.007
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 35 0.15
02_01_0548 + 4035265-4035431,4035517-4035651,4035859-4036081,403... 34 0.26
07_01_0752 - 5783305-5783416,5783739-5783836,5784550-5784675,578... 32 0.80
02_02_0299 - 8726024-8726101,8726460-8726534,8726836-8726965,872... 32 1.1
10_08_0002 - 13986969-13989338 30 3.2
05_07_0008 - 27007919-27007944,27008070-27008127,27008218-270082... 30 3.2
09_02_0548 - 10467342-10468810,10470309-10471632 29 9.8
01_06_1124 - 34679205-34680926,34681438-34682811 29 9.8
>01_01_0130 +
1182504-1182817,1183024-1183152,1183582-1183716,
1184296-1184392,1184633-1184736,1184924-1184975,
1185261-1185458
Length = 342
Score = 111 bits (266), Expect = 1e-24
Identities = 62/187 (33%), Positives = 110/187 (58%), Gaps = 5/187 (2%)
Frame = +1
Query: 199 EIMDETELDPSVLGTREYWKE-AYAKEIRNFDEFGDTGDVWFGEDSALRVIRW---ICDC 366
++ D +++P +LG Y ++ +YA+ + NF E T D WFG ++ ++ W +C
Sbjct: 109 DVPDSADMEPPLLGLPNYHQDGSYAEYLANFQERSHTDD-WFGTENMDVLVSWTKNLCSN 167
Query: 367 GVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVA-KQNYPFINYKLF 543
R+ ++D+G G+G +LAK+GF++L G+D+ E AI +AR +A + + IN+ +
Sbjct: 168 KDLRSCSVLDIGTGSGRLSQQLAKQGFSDLTGIDHSEGAIEVARNLAIRDGFEHINFLVD 227
Query: 544 DITTDDVIALGQYAIVHDKGTYDAIGLNPIDPKACREKYIEQIHRLLLDEGIFIITSCNW 723
D+ + ++ +V D+GT D IGL+P D R Y + + L+ GI +ITSC+
Sbjct: 228 DVLESKLER--RFELVMDEGTLDTIGLHP-DGPVKRMMYWQSVAGLVSPGGILVITSCSR 284
Query: 724 TEEELVK 744
T++ELV+
Sbjct: 285 TKDELVQ 291
>01_06_0299 +
28305447-28305729,28305892-28306104,28306915-28307043,
28307677-28307857,28308329-28308425,28309157-28309260,
28309734-28309785,28310040-28310252
Length = 423
Score = 104 bits (250), Expect = 1e-22
Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
Frame = +1
Query: 361 DCGVDR----NSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKV-AKQNYPF 525
+C VD N P++D+G GNG L LAK+GF+NL G DY E AI LA+ + A+ +
Sbjct: 238 NCEVDEKQLSNYPVLDVGTGNGLLLQALAKQGFSNLTGTDYSEGAIELAKNLAARDGFTS 297
Query: 526 INYKLFDITTDDVIALGQYAIVHDKGTYDAIGLNPIDPKACREKYIEQIHRLLLDEGIFI 705
IN+ + DI + ++ IV DKGT DAIGL+P D + R Y E + L+ GI +
Sbjct: 298 INFLVDDILETKLDR--KFKIVTDKGTLDAIGLHP-DGRIKRVMYWESVSNLVEPGGIVV 354
Query: 706 ITSCNWTEEELVKHFSEKMKLK 771
+TSCN T++ELV+ + K K
Sbjct: 355 VTSCNHTKDELVQEVEDFSKTK 376
>05_04_0192 +
18936955-18937168,18937385-18937498,18937588-18937656,
18937807-18937826,18937932-18937984,18938082-18938139,
18938338-18938367,18938468-18938719
Length = 269
Score = 55.6 bits (128), Expect = 7e-08
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 4/171 (2%)
Frame = +1
Query: 238 GTREYWKEAYAKEIRNFDEF-GDTGDVWFGEDSALRVIRWICDCGVDRNSPIIDLGCGNG 414
G YW Y+ + G G +F A +R + + +S ++ LGCGN
Sbjct: 12 GAAAYWDARYSSPSPSSTATTGGGGGAFFDWYQAYPALRPLLRARLPASSRVLMLGCGNS 71
Query: 415 YTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVIALGQYAIVH 594
++ K+G+ ++ VD I R+ + P + Y D+ + G + V
Sbjct: 72 LLSEDMVKDGYEEVVNVDISSVVIEQMRE-KHVDIPQLTYFQMDVRDMSLFGDGTFDCVL 130
Query: 595 DKGTYDAIGLNPIDPKACREKYIEQIHRLLLDEGIFIIT---SCNWTEEEL 738
DKGT DA+ P K + ++ R+L GI+++ + N T+E L
Sbjct: 131 DKGTLDAMMCGDDAPLGA-SKMLAEVARILRPGGIYMLVHPLNLNNTKETL 180
>08_02_1260 -
25680618-25680677,25680763-25680893,25681085-25681163,
25681250-25681280,25681358-25681410,25681441-25681511,
25681610-25681678,25681776-25681889,25683101-25683293
Length = 266
Score = 51.6 bits (118), Expect = 1e-06
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 16/173 (9%)
Frame = +1
Query: 238 GTREYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRWICDCGVDRNSPIIDLGCGNGY 417
G YW E Y KE FD W+ + AL + + V R+ ++ GCGN
Sbjct: 17 GEAWYWDERYRKEAGPFD--------WYQKYPALAPLLAVY---VRRHHRLLLAGCGNSV 65
Query: 418 TLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVIALGQYAIVHD 597
+ +G+ +++ +D I +K + P + Y D+ G + V D
Sbjct: 66 FGENMVDDGYQDIVNIDISSVVIDQMKKKYRDK-PHLKYMKMDVRNMAEFESGSFDAVID 124
Query: 598 KGTYDAIGLNPIDPK---------ACRE-------KYIEQIHRLLLDEGIFII 708
KGT D+I ++P P C + + +E+++R+L D+G++I+
Sbjct: 125 KGTLDSIMVSPFLPVYNILKFSSFMCGQNSQENASQMLEEVNRILKDKGVYIL 177
>04_03_0669 +
18531419-18531820,18532589-18532690,18532882-18532948,
18533530-18533708,18533792-18534052,18535324-18535407,
18535517-18535564,18535654-18535718,18536849-18536897,
18538132-18538372,18539623-18539744,18539942-18540022,
18540094-18540168,18540408-18540550,18540662-18540812,
18540915-18541097
Length = 750
Score = 39.5 bits (88), Expect = 0.005
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +1
Query: 400 GCGNGYTLSELAKEGFTNLLGVDYCEAAIT-LARKVAKQNYPFINYKLFDITTDDVIALG 576
GCG+ L GF + VD+ + + R+ A+ P + +++ D+ TD G
Sbjct: 81 GCGSSVLSERLYDAGFRRVTNVDFSRVLVADMLRRHARAR-PEMRWRVMDM-TDMQFTDG 138
Query: 577 QYAIVHDKGTYDAIGLNPIDPKACREKYIEQIHRLLLDEGIF 702
+ ++ DKG DA+ + P KY+ + R+L G F
Sbjct: 139 SFDVILDKGGLDAL-MEPEAGTKLGMKYLNEAKRVLKSGGKF 179
>11_06_0082 +
19891184-19891332,19891349-19891445,19891584-19891725,
19891853-19891935,19892356-19892490,19892759-19892863,
19893043-19893168
Length = 278
Score = 39.1 bits (87), Expect = 0.007
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 9/115 (7%)
Frame = +1
Query: 388 IIDLGCGNGYTLSELAKEGFT-NLLGVDYCEAAITLAR-KVAKQNYPFINYKLFDITTDD 561
++++GCGN EL +EG + VD A+ R ++A+Q + + D+ D
Sbjct: 83 VLEVGCGNSRLGEELLREGVAGGITCVDLSPVAVQRMRDRLAEQGTEGVEVVVADM-LDL 141
Query: 562 VIALGQYAIVHDKGTYDAIGLNPIDPKACRE-------KYIEQIHRLLLDEGIFI 705
+ +V +KGT D + ++ DP K +E IH++L EGIF+
Sbjct: 142 PFDRESFDLVIEKGTMDVLFVDSGDPWNPNPTTVDNVMKMLEGIHKVLKPEGIFV 196
>06_01_0375 +
2699179-2699264,2699697-2699786,2699913-2699991,
2700816-2700893,2701290-2701338,2702183-2702232,
2702704-2702853,2703437-2703517,2703593-2703609,
2705804-2705893,2706033-2706111,2706234-2706311,
2707554-2707687,2707858-2707936,2708108-2708188,
2708263-2708400
Length = 452
Score = 39.1 bits (87), Expect = 0.007
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +1
Query: 388 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITTDDVI 567
+ID+GCG G LA+ G T + G+D + I +AR A + + + F T +D
Sbjct: 73 VIDVGCGGGILSEPLARMGAT-VTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAED-- 129
Query: 568 ALGQYAIVHDKGTYDA-IGLNPIDPKACREKYIEQIHRLLLDEGIFIITSCN 720
+V + +DA I L I+ A + E + L + G +I++ N
Sbjct: 130 ------LVKENKQFDAVISLEVIEHVANPSGFCESLSALTVPNGATVISTIN 175
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 388 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLAR 498
IID+GC G LA+ G T + G+D + +I +AR
Sbjct: 271 IIDVGCAAGMLSEPLARMGAT-VTGIDAADESIKIAR 306
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 34.7 bits (76), Expect = 0.15
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 388 IIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQN 516
++D+GCG G AK G + ++ VD +++A +VAK N
Sbjct: 295 VLDVGCGTGILSLFAAKAGASRVIAVDGSAKMVSVATEVAKSN 337
>02_01_0548 +
4035265-4035431,4035517-4035651,4035859-4036081,
4036282-4036468,4036627-4036811,4037435-4037572,
4037995-4038123
Length = 387
Score = 33.9 bits (74), Expect = 0.26
Identities = 26/100 (26%), Positives = 48/100 (48%)
Frame = +1
Query: 370 VDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDI 549
+ ++ ++DL C +G AK G N++G+D +A+ LA K N ++ +
Sbjct: 208 LSKDQRVLDLCCYSGGFALNAAKGGANNVIGIDSSASALDLANKNIILNK--LDTQRISF 265
Query: 550 TTDDVIALGQYAIVHDKGTYDAIGLNPIDPKACREKYIEQ 669
+D A + AI ++ +D + L+P PK K + Q
Sbjct: 266 VKEDATAFMKGAISRNE-VWDLVILDP--PKLAPRKKVLQ 302
>07_01_0752 -
5783305-5783416,5783739-5783836,5784550-5784675,
5784890-5785090,5785185-5785268,5785519-5785566,
5785709-5785763,5786130-5786185,5786281-5786365,
5786485-5786558,5787093-5787159,5788134-5788216
Length = 362
Score = 32.3 bits (70), Expect = 0.80
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +1
Query: 367 GVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKV 504
GV ++D+GCG G L E+AK ++ G++ E IT +++
Sbjct: 97 GVKPGMKVLDVGCGIGGPLREIAKFSLASVTGLNNNEYQITRGKEL 142
>02_02_0299 -
8726024-8726101,8726460-8726534,8726836-8726965,
8727406-8727601,8727894-8727965,8728087-8728159,
8728240-8728344,8728502-8728624,8728730-8728806,
8729064-8729108,8729214-8729433
Length = 397
Score = 31.9 bits (69), Expect = 1.1
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +1
Query: 364 CGVDRNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLF 543
C + ++ +G G+G L E+ + G ++ +D CE L V K +P ++
Sbjct: 148 CSIPSPKKVLVIGGGDGGVLREICRHG--SVESIDICEID-QLVIDVCKDFFPDLSVGFK 204
Query: 544 D----ITTDDVIALGQYAIVHDKGTYDAIGLNPIDPKACREKYIEQ 669
D + D + + A +GTYDAI ++ DP ++ +E+
Sbjct: 205 DPRVRLHVGDAVEFLRNA---PEGTYDAIIVDSSDPIGPAQELVEK 247
>10_08_0002 - 13986969-13989338
Length = 789
Score = 30.3 bits (65), Expect = 3.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 685 LDEGIFIITSCNWTEEELVKHFSEKM 762
+DE + ++TS NWT EE +H ++ M
Sbjct: 594 IDEFMLLLTSINWTPEETPEHVNDYM 619
>05_07_0008 -
27007919-27007944,27008070-27008127,27008218-27008292,
27008417-27008470,27008574-27008840,27008913-27009193,
27009268-27009409,27009491-27009601,27009975-27010013,
27010173-27010310,27010415-27010552,27011438-27011562,
27011702-27011723
Length = 491
Score = 30.3 bits (65), Expect = 3.2
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 376 RNSPIIDLGCGNGYTLSELAKEGFTNLLGVDYCEAAITLARKVAKQNYPFINYKLFDITT 555
+ +++LG G G ELAKE ++L +D+ E+ I + ++ I + D+T+
Sbjct: 58 KGKSVLELGAGIGRFTGELAKEA-GHVLALDFIESVIKKNENI-NGHHKNITFMCADVTS 115
Query: 556 DDV 564
D+
Sbjct: 116 PDL 118
>09_02_0548 - 10467342-10468810,10470309-10471632
Length = 930
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 202 IMDETELDPSVLGTREYWKEAYAKEIRNFDEFGDTGDVWFG--EDSALRVIRWICD 363
I+DE +DP +L T + + + I D GD +V E LRV+ W+CD
Sbjct: 314 ILDENGIDPHILRTPAGVRGSELRAI--VDGNGDRHNVRVVVLEGETLRVVTWLCD 367
>01_06_1124 - 34679205-34680926,34681438-34682811
Length = 1031
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 699 NTLIEEQSMNLFDVFLSAGFRVYGIQAYSIVCA 601
N E++S+NLF L+ GFR G+ ++ A
Sbjct: 863 NNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIA 895
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,926,889
Number of Sequences: 37544
Number of extensions: 553198
Number of successful extensions: 1219
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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