Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_D01
         (1221 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    27   0.84 

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 27.5 bits (58), Expect = 0.84
 Identities = 19/86 (22%), Positives = 36/86 (41%)
 Frame = +1

Query: 244 REYWKEAYAKEIRNFDEFGDTGDVWFGEDSALRVIRWICDCGVDRNSPIIDLGCGNGYTL 423
           R+ WK A  +EI++  E          +D      +W+    +D +  I+          
Sbjct: 441 RDLWKRAMEEEIKSLHENATWEIASLPKDRKAVGSKWVFKRKMDGDGKIVQYK------- 493

Query: 424 SELAKEGFTNLLGVDYCEAAITLARK 501
           + L  +GF+ + G DY E    +A++
Sbjct: 494 ARLVAKGFSQVYGADYDEVFAPVAKQ 519


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,091,837
Number of Sequences: 2352
Number of extensions: 24098
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138973980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)