Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C21
         (1289 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0158 - 41556455-41557300,41557402-41557583,41557705-415578...    31   2.0  

>01_07_0158 -
           41556455-41557300,41557402-41557583,41557705-41557885,
           41558352-41558370,41558477-41558737,41558777-41558946
          Length = 552

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -1

Query: 419 ENKLNVVWISVKLFYLYLILIKQRVLVKLIRSTFTKCTDL 300
           E  LNVVW+SV + ++  + +  + +       F+ C+DL
Sbjct: 392 EVPLNVVWLSVAVAFVMALTVNSKSIAAAAAVNFSSCSDL 431


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,601,010
Number of Sequences: 37544
Number of extensions: 236517
Number of successful extensions: 622
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)