Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C18
         (1302 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037...    38   0.013
03_02_0427 + 8367633-8368205,8369318-8369809,8370602-8370817,837...    33   0.65 
01_02_0059 - 10701859-10701963,10702034-10702153,10702534-107026...    29   8.0  

>04_04_0233 + 23801944-23802598,23802914-23803047,23803548-23803730,
            23804145-23804318
          Length = 381

 Score = 38.3 bits (85), Expect = 0.013
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +1

Query: 802  EDGLNLLRSAANRDHAPALYNLGLCYEMGLGVSVNXKMAMELYKSXXXXHHQGALYXWGI 981
            E+ +     AA   +A A YNLGLC + G G+  N + A + Y       +  A+Y   +
Sbjct: 225  EEAVRWFYPAAAAGNARAQYNLGLCLQNGKGIKRNQREAAKWYLRAAEGGNVRAMYNISL 284

Query: 982  NYGQGRG 1002
             Y  G G
Sbjct: 285  CYNYGEG 291



 Score = 32.3 bits (70), Expect = 0.86
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +1

Query: 829 AANRDHAPALYNLGLCYEMGLGVSVNXKMAMELYKSXXXXHHQGALYXWGI 981
           AA   +  A+YN+ LCY  G G S +   +    +      H+ ALY  GI
Sbjct: 270 AAEGGNVRAMYNISLCYNYGEGFSQDQVRSKRWLQLAADCGHKKALYECGI 320


>03_02_0427 + 8367633-8368205,8369318-8369809,8370602-8370817,
            8371914-8372237,8372991-8373233,8374056-8374250
          Length = 680

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +1

Query: 814  NLLRSAANRDHAPALYNLGLCYEMGLGVSVNXKMAMELYKSXXXXHHQGALYXWGI-NYG 990
            N    A N     A+Y +   ++ G+G+  N +MA  +YKS        +L  W + +Y 
Sbjct: 394  NFFLRAVNAGQPKAIYQVAKLFQKGVGLKRNLQMAAVMYKSVAERGPWSSLSRWALESYL 453

Query: 991  QGRGGXSKTL 1020
            +G  G +  L
Sbjct: 454  KGDIGKALLL 463


>01_02_0059 -
           10701859-10701963,10702034-10702153,10702534-10702609,
           10702897-10703276
          Length = 226

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = +1

Query: 448 WSSGLIIGWYTSQLIHIKYKYHSNQYQKKCPTLSHIVNSLRPYFICSINNG 600
           W  G   GWY+   +       S Q Q++CP  +   N+L P +      G
Sbjct: 119 WGGGGRGGWYSGVAVPRGAAARSWQEQRRCPHKTSATNTLSPRYATRCGEG 169


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,397,982
Number of Sequences: 37544
Number of extensions: 390761
Number of successful extensions: 691
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)