Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_C16
(1261 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 261 2e-68
UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-... 182 2e-44
UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=... 175 3e-42
UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium ... 175 3e-42
UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone... 174 3e-42
UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E; ... 174 3e-42
UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11; P... 173 6e-42
UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;... 169 1e-40
UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1; N... 169 2e-40
UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I, NUHM... 166 1e-39
UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;... 159 1e-37
UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=... 159 2e-37
UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1; Orie... 157 7e-37
UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 157 7e-37
UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, who... 157 7e-37
UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 157 7e-37
UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9; Alphaprote... 154 5e-36
UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase, mitocho... 152 2e-35
UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9; R... 150 9e-35
UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;... 150 9e-35
UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 148 3e-34
UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=... 148 3e-34
UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase... 146 8e-34
UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1... 143 7e-33
UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1... 136 9e-31
UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4; Alphaprote... 136 1e-30
UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3; C... 132 2e-29
UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2... 117 7e-25
UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2; Bact... 116 1e-24
UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;... 115 2e-24
UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1; Bdel... 115 3e-24
UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=... 115 3e-24
UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2; B... 113 1e-23
UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24... 110 6e-23
UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2 su... 110 8e-23
UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp... 109 1e-22
UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;... 109 1e-22
UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1; Mari... 107 8e-22
UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;... 104 4e-21
UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5; The... 103 1e-20
UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 103 1e-20
UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;... 103 1e-20
UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1; Prop... 102 2e-20
UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2; D... 102 2e-20
UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;... 102 2e-20
UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;... 101 5e-20
UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;... 100 9e-20
UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 99 1e-19
UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;... 99 1e-19
UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;... 99 1e-19
UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;... 99 1e-19
UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;... 100 2e-19
UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 100 2e-19
UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n... 98 5e-19
UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24... 97 6e-19
UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 97 6e-19
UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 97 6e-19
UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD su... 97 8e-19
UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit... 97 8e-19
UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase... 95 3e-18
UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 95 5e-18
UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;... 95 5e-18
UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E; ... 95 5e-18
UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 94 8e-18
UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 93 1e-17
UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;... 93 1e-17
UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellula... 93 1e-17
UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3; Actinomyce... 93 2e-17
UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH... 92 3e-17
UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 92 3e-17
UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit... 91 4e-17
UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the NADH:ubi... 91 4e-17
UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E; ... 91 6e-17
UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreducta... 91 7e-17
UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4; D... 90 1e-16
UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;... 89 2e-16
UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E; ... 89 2e-16
UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 89 3e-16
UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;... 88 4e-16
UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 88 5e-16
UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 87 7e-16
UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 87 9e-16
UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1; Sy... 86 2e-15
UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4; Syn... 86 2e-15
UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 85 3e-15
UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;... 85 4e-15
UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 85 4e-15
UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa s... 84 6e-15
UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 83 1e-14
UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n... 83 1e-14
UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 83 2e-14
UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6; G... 82 3e-14
UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5; Mora... 82 3e-14
UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 4e-14
UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E; ... 81 6e-14
UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 81 8e-14
UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 80 1e-13
UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5; B... 80 1e-13
UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa s... 80 1e-13
UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 80 1e-13
UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E... 79 2e-13
UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 79 3e-13
UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 79 3e-13
UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 78 4e-13
UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 78 6e-13
UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1; ... 78 6e-13
UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 77 7e-13
UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kD... 77 7e-13
UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, ga... 77 1e-12
UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 77 1e-12
UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 77 1e-12
UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1; Le... 77 1e-12
UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4; Bact... 76 2e-12
UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=... 75 3e-12
UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n... 75 4e-12
UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 74 7e-12
UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 74 9e-12
UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 73 2e-11
UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 73 2e-11
UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4... 72 3e-11
UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 72 3e-11
UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E; ... 72 4e-11
UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n... 71 5e-11
UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma j... 71 5e-11
UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gam... 69 2e-10
UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1; En... 69 2e-10
UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n... 69 3e-10
UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 69 3e-10
UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobact... 68 4e-10
UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 68 4e-10
UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n... 68 4e-10
UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1; Met... 67 1e-09
UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 67 1e-09
UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1; Buch... 63 1e-08
UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 63 1e-08
UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16; Alp... 62 2e-08
UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 62 2e-08
UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 60 9e-08
UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gam... 60 2e-07
UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa ... 59 2e-07
UniRef50_Q8NK93 Cluster: NADH-ubiquinone oxidoreductase 24kDa su... 59 2e-07
UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase, NADH-bi... 58 5e-07
UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 55 3e-06
UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreducta... 54 8e-06
UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase... 54 1e-05
UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa... 52 3e-05
UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2; Actinomycetale... 52 3e-05
UniRef50_A0Z690 Cluster: Formate dehydrogenase subunit gamma; n=... 46 0.002
UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit... 46 0.002
UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F; ... 45 0.004
UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,... 43 0.015
UniRef50_Q2AG56 Cluster: NADH dehydrogenase I chain G; n=1; Halo... 43 0.015
UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;... 43 0.019
UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=... 42 0.034
UniRef50_Q5UYB6 Cluster: Colbalt chelase thioredoxin; n=6; Halob... 42 0.034
UniRef50_Q04NF7 Cluster: Ferredoxin related-protein; n=4; Leptos... 42 0.044
UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n... 39 0.24
UniRef50_A5KR35 Cluster: Putative uncharacterized protein; n=1; ... 39 0.31
UniRef50_Q8KX55 Cluster: Ferredoxin PetF2; n=1; Synechococcus sp... 36 1.7
UniRef50_A6PNR9 Cluster: Putative uncharacterized protein precur... 36 1.7
UniRef50_Q2AG82 Cluster: Ferredoxin:4Fe-4S ferredoxin, iron-sulf... 36 2.2
UniRef50_A7HJV1 Cluster: NADH:ubiquinone oxidoreductase 24 kD su... 36 2.2
UniRef50_A2Y635 Cluster: Putative uncharacterized protein; n=2; ... 36 2.9
UniRef50_A0UUV1 Cluster: Putative uncharacterized protein; n=1; ... 35 3.9
UniRef50_A5ALP4 Cluster: Putative uncharacterized protein; n=1; ... 35 5.1
UniRef50_Q60C55 Cluster: Ferredoxin, 2Fe-2S; n=4; Proteobacteria... 34 6.7
UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep: Hydro... 34 6.7
UniRef50_P15799 Cluster: Surface antigen CRP170; n=46; Giardia|R... 34 8.9
>UniRef50_P19404 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor; n=64; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 2, mitochondrial precursor - Homo sapiens
(Human)
Length = 249
Score = 261 bits (640), Expect = 2e-68
Identities = 127/218 (58%), Positives = 154/218 (70%)
Frame = +1
Query: 205 GXMSSLFVHRATPAANPXSPLSARRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXGG 384
G +LFVHR TP NP +P GHK A+ P+L LAQRQ G
Sbjct: 33 GAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQ-NG 91
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
WLPISAM+KVAE L +P M VYEVATFYTM+ R+P+GKYH+QVCTTTPC LR SD+IL A
Sbjct: 92 WLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEA 151
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKD 744
I+++ +VG +P F++ EVECLGACVNAPM+Q+ND+YYEDL+ +D +EII +LK
Sbjct: 152 IQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTAKDIEEIIDELKAG 211
Query: 745 EKPKPGPRSGRFASEPLGGLTSLTEEXTGXGFGVQXAL 858
+ PKPGPRSGRF+ EP GGLTSLTE G GFGVQ L
Sbjct: 212 KIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGVQAGL 249
>UniRef50_Q9VVF0 Cluster: CG6485-PA; n=2; Sophophora|Rep: CG6485-PA
- Drosophila melanogaster (Fruit fly)
Length = 238
Score = 182 bits (443), Expect = 2e-44
Identities = 88/172 (51%), Positives = 114/172 (66%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
+GA+ PLL +AQRQ G WL ISA+ VAE + + M +E A FYTMF +P GKY V V
Sbjct: 57 KGALLPLLDIAQRQQG-WLSISAVQAVAETIKIDPMEAFEAAQFYTMFFMKPRGKYVVSV 115
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
CT+TPC LRG D I A K+ N E G +P +F++ E C+GACVNAP++ VNDD YE
Sbjct: 116 CTSTPCKLRGGDEIFEACKKTLNLEHGQTTPDMQFTLKEDYCMGACVNAPVLAVNDDMYE 175
Query: 694 DLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTGXGFGVQ 849
DL + I++ L+ D+ P GPR+GRFASEP GGLT+L + GF +Q
Sbjct: 176 DLDEKSLANILADLRNDKLPPAGPRNGRFASEPKGGLTTLKIQPPPPGFMMQ 227
>UniRef50_Q0BSK6 Cluster: NADH-quinone oxidoreductase chain E; n=5;
Rhodospirillales|Rep: NADH-quinone oxidoreductase chain
E - Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 227
Score = 175 bits (425), Expect = 3e-42
Identities = 83/169 (49%), Positives = 115/169 (68%), Gaps = 6/169 (3%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXG-----GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIG 495
+ A+ PLL LAQRQ G W+P +AM ++A L + + VYEVATFY M+ RP+G
Sbjct: 42 RASAVMPLLDLAQRQMGRETGSAWIPRAAMDEIARRLGMAPIRVYEVATFYFMYNTRPVG 101
Query: 496 KYHVQVCTTTPCWLRGSDAILNAIKQETNCE-VGGNSPCGKFSVSEVECLGACVNAPMIQ 672
++H+Q+CTTTPCWLRGSD ++ A + T + G S G F+++EVECLGACVNAP++Q
Sbjct: 102 RHHLQLCTTTPCWLRGSDEVVAACRSATGIQGWGETSEDGMFTMTEVECLGACVNAPILQ 161
Query: 673 VNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTE 819
V+DDYYED+ T ++ L++ E+P PG SGR S P GG T+L +
Sbjct: 162 VDDDYYEDMDGPRTLVLLEALRRGERPTPGSMSGRQNSAPEGGPTTLRD 210
>UniRef50_Q54F10 Cluster: NADH dehydrogenase; n=1; Dictyostelium
discoideum AX4|Rep: NADH dehydrogenase - Dictyostelium
discoideum AX4
Length = 247
Score = 175 bits (425), Expect = 3e-42
Identities = 83/168 (49%), Positives = 111/168 (66%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+++ A+ PLL LAQRQ GGW+ + AM KVA + M YEVA+FYTMF R IG+ V
Sbjct: 73 YRQSALIPLLDLAQRQNGGWISLRAMDKVAHICGIAPMTAYEVASFYTMFNRTKIGENFV 132
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
QVCTTTPC LRGS I+ K +VG +P KF++ EVECLGACVNAPM+ +NDD+
Sbjct: 133 QVCTTTPCMLRGSGEIIKTCKSHLGIQVGETTPDNKFTLVEVECLGACVNAPMMCINDDF 192
Query: 688 YEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTG 831
YEDL+ T ++ ++K ++ K GP++ R A+E G T+L E G
Sbjct: 193 YEDLTSASTINLLDQIKNNKPTKIGPQTHRKAAEGPQGKTTLLEPPVG 240
>UniRef50_Q9UUT9 Cluster: Subunit NUHM of protein NADH:Ubiquinone
Oxidoreductase; n=3; Fungi/Metazoa group|Rep: Subunit
NUHM of protein NADH:Ubiquinone Oxidoreductase -
Yarrowia lipolytica (Candida lipolytica)
Length = 243
Score = 174 bits (424), Expect = 3e-42
Identities = 90/194 (46%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Frame = +1
Query: 226 VHRATPAANPXSPLS-ARRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXGGWLPISA 402
VHR T NP P + +K A + + +K+ A+ PLL + QRQ G + IS
Sbjct: 32 VHRNTENNNPSIPFEFSPENMKRAEEVIAKYPP-QYKKAAVMPLLDIGQRQLG-YTSISV 89
Query: 403 MHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETN 582
M+ VA+ L +P M VYEVATFYTM+ R P+G+YH+Q+CTTTPC L GSD I+ A++ N
Sbjct: 90 MNYVAKLLEMPPMRVYEVATFYTMYNRTPMGRYHLQICTTTPCQLCGSDGIMEAVQNTLN 149
Query: 583 CEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPG 762
+ G + F++SEVECLGACVNAPM+ +NDDYYEDL+ E T +++ K + P PG
Sbjct: 150 IKPGETTKDNLFTLSEVECLGACVNAPMMAINDDYYEDLTPEGTVKLLEDCKAGKMPTPG 209
Query: 763 PRSG-RFASEPLGG 801
P + R EP G
Sbjct: 210 PENHVRRDCEPASG 223
>UniRef50_Q4UM09 Cluster: NADH-quinone oxidoreductase subunit E;
n=18; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Rickettsia felis (Rickettsia
azadi)
Length = 167
Score = 174 bits (424), Expect = 3e-42
Identities = 76/140 (54%), Positives = 102/140 (72%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
KR A+ PLL LAQRQ GGWLP+ A+ VA L +P M YEVATFY+MF + +GKYH+Q
Sbjct: 27 KRSAILPLLDLAQRQNGGWLPVPAIEYVANMLEMPYMRAYEVATFYSMFNLKRVGKYHIQ 86
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCTTTPCWL GSD I+ +++ ++ + KF++SE+ECLGACVNAP++Q+NDDYY
Sbjct: 87 VCTTTPCWLHGSDDIMKICEKKLGIKLKETTEDQKFTLSEIECLGACVNAPVVQINDDYY 146
Query: 691 EDLSVEDTKEIISKLKKDEK 750
EDL+ E +++I + D K
Sbjct: 147 EDLTEEKMEKLIDEYSNDFK 166
>UniRef50_Q2TZN8 Cluster: NADH:ubiquinone oxidoreductase; n=11;
Pezizomycotina|Rep: NADH:ubiquinone oxidoreductase -
Aspergillus oryzae
Length = 270
Score = 173 bits (422), Expect = 6e-42
Identities = 99/216 (45%), Positives = 125/216 (57%), Gaps = 12/216 (5%)
Frame = +1
Query: 202 QGXMSSLFVHRATPAANPXSPLSARRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXG 381
Q SL VHR P NP P + + +K+ A+ PLL L QRQ G
Sbjct: 33 QRCSDSLSVHRNKPTNNPSIPFTFNEQNQRLIDEILKRYPPQYKKAAVMPLLDLGQRQHG 92
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG--SDAI 555
+ IS M++VA L +P M VYEVATFYTM+ R P+GKY VQ+CTTTPC L G S I
Sbjct: 93 -FTSISVMNEVARLLEMPPMRVYEVATFYTMYNREPVGKYFVQLCTTTPCQLGGCGSTKI 151
Query: 556 LNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 735
L AI++ G + G F++ EVECLGACVNAPM+Q+NDDYYEDL+ E K +++ L
Sbjct: 152 LEAIQEHLGITPGHTTEDGLFTLLEVECLGACVNAPMVQINDDYYEDLTPESMKTLLTAL 211
Query: 736 KKD----------EKPKPGPRSGRFASEPLGGLTSL 813
K+ + P PGP SGR E GLT+L
Sbjct: 212 KESATATDAGKTVQIPAPGPMSGRNTCENSAGLTNL 247
>UniRef50_Q1GTK2 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Alphaproteobacteria|Rep: NADH-quinone
oxidoreductase, E subunit - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 222
Score = 169 bits (411), Expect = 1e-40
Identities = 85/172 (49%), Positives = 111/172 (64%), Gaps = 7/172 (4%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXG------GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRR 486
G +R A+ PLL LAQRQ G GWLP+ + VA L++P + YEVATFYTM+
Sbjct: 40 GRQRSAVMPLLDLAQRQVGAETQTQGWLPVPVIEYVAAQLDMPFIRAYEVATFYTMYNLA 99
Query: 487 PIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPM 666
P+G+YHVQVC TTPC LRGSD + A K + G +P G F++SEVEC+G C NAPM
Sbjct: 100 PVGRYHVQVCGTTPCLLRGSDDVTAACKNRGMVK-GKTTPDGLFTLSEVECMGTCANAPM 158
Query: 667 IQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRS-GRFASEPLGGLTSLTE 819
+Q+NDD YEDL + I+ +L ++PK G ++ R SEP GG T+L E
Sbjct: 159 VQINDDNYEDLDYDSMTRILDELAAGKQPKTGTQNPRRHTSEPEGGPTTLKE 210
>UniRef50_Q2GDD2 Cluster: NADH dehydrogenase I, E subunit; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: NADH
dehydrogenase I, E subunit - Neorickettsia sennetsu
(strain Miyayama)
Length = 181
Score = 169 bits (410), Expect = 2e-40
Identities = 74/136 (54%), Positives = 100/136 (73%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
KR A+ PLL L QRQ W+PI+AM VA+ L LP + VYEVA+FY+MF P+GK+ ++
Sbjct: 46 KRSAVLPLLHLVQRQHENWIPIAAMDHVAQLLGLPVIKVYEVASFYSMFNTAPVGKHTIR 105
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC TTPCWLRGSD ++ A K+E +VG + KFS+ EVECLGACV+AP++Q+NDDY+
Sbjct: 106 VCRTTPCWLRGSDCLIEAAKRELGIKVGHKTEDNKFSLDEVECLGACVSAPVVQINDDYF 165
Query: 691 EDLSVEDTKEIISKLK 738
E+L E++S+LK
Sbjct: 166 ENLDERSFLELLSRLK 181
>UniRef50_Q5ACX6 Cluster: Potential mitochondrial Complex I,
NUHM_24kd subunit; n=5; Saccharomycetales|Rep: Potential
mitochondrial Complex I, NUHM_24kd subunit - Candida
albicans (Yeast)
Length = 243
Score = 166 bits (403), Expect = 1e-39
Identities = 93/198 (46%), Positives = 120/198 (60%), Gaps = 2/198 (1%)
Frame = +1
Query: 214 SSLFVHRATPAANPXSPLSARRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXGGWLP 393
S + VHR T NP K +K+GA PLL L QRQ G +
Sbjct: 27 SIISVHRDTKEDNPNIAFEFNSENKKRAEEIIAKYPPQYKKGACMPLLDLGQRQLG-FTS 85
Query: 394 ISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQ 573
IS M+ VA+ L++P M VYEVATFYTM+ R P+GKY++QVCTTTPC L GSD+I+ AI
Sbjct: 86 ISVMNYVAKLLDMPPMRVYEVATFYTMYNRHPMGKYNLQVCTTTPCQLCGSDSIMKAITD 145
Query: 574 ETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKK-DEK 750
+ G +P F++ EVECLGACVNAPMI +NDDY+EDLS E T ++ +L++ E
Sbjct: 146 YLKIKPGQTTPDKLFTLQEVECLGACVNAPMIAINDDYHEDLSPEATINLLKQLQEGKEL 205
Query: 751 PKPGPRSG-RFASEPLGG 801
+ GP G R + EP G
Sbjct: 206 TEIGPVDGKRQSCEPFSG 223
>UniRef50_A5NY87 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium sp. 4-46|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium sp. 4-46
Length = 394
Score = 159 bits (386), Expect = 1e-37
Identities = 78/166 (46%), Positives = 102/166 (61%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G + A+ PLL AQ Q GGWLP A+ VA+ L +P + V EVATFYTMF P+G+Y
Sbjct: 36 GRQASAVIPLLWRAQEQNGGWLPQKAIEAVADELGMPHIRVLEVATFYTMFALEPVGRYW 95
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+QVC T PC + G+ + + + G SP G FS EVECLGAC NAPM+Q+N D
Sbjct: 96 IQVCGTVPCDVCGAKELKHYLHDRLG-PAGHVSPDGNFSWLEVECLGACCNAPMVQINQD 154
Query: 685 YYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEE 822
YYEDL+ E ++ L K G ++GR +SEP G T+LT+E
Sbjct: 155 YYEDLTPEILGRLMDDLAAGRPVKAGSQAGRTSSEPKGAATTLTDE 200
>UniRef50_Q5FGV2 Cluster: NADH-quinone oxidoreductase chain E; n=5;
canis group|Rep: NADH-quinone oxidoreductase chain E -
Ehrlichia ruminantium (strain Gardel)
Length = 183
Score = 159 bits (385), Expect = 2e-37
Identities = 72/139 (51%), Positives = 98/139 (70%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K A+ PLL +AQ+Q GG +PI+AM+ +A+ L++ + VYEVA FY+M+ GKY VQ
Sbjct: 40 KSSAVMPLLHIAQKQCGGLIPIAAMNYIADFLDMKPIHVYEVAKFYSMYNLSVTGKYLVQ 99
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC TTPCWL GSD +L A K+ N +VG + F++ EVECLGACVNAP++Q+NDDYY
Sbjct: 100 VCRTTPCWLCGSDNVLKACKEFLNIDVGNTTDDNLFTLKEVECLGACVNAPVVQINDDYY 159
Query: 691 EDLSVEDTKEIISKLKKDE 747
E L+ + K I+ + KK E
Sbjct: 160 EKLNADKIKNILMEYKKKE 178
>UniRef50_A5CES4 Cluster: NADH dehydrogenase I chain E; n=1;
Orientia tsutsugamushi Boryong|Rep: NADH dehydrogenase I
chain E - Orientia tsutsugamushi (strain Boryong)
(Rickettsia tsutsugamushi)
Length = 192
Score = 157 bits (380), Expect = 7e-37
Identities = 72/144 (50%), Positives = 95/144 (65%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G + A+ +L LAQ Q WL S + VA L +P + VYE+A+FYTMF +P+GKYH
Sbjct: 29 GKEASAVLAILDLAQNQNNNWLSNSCIEYVANLLKMPYIKVYEIASFYTMFNLQPVGKYH 88
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+Q+C TTPCWLRGSD I+N K+ E G S F+VSE ECLGAC NAP++Q+N D
Sbjct: 89 IQICGTTPCWLRGSDDIMNFCKKLLKIETGKTSQDKLFTVSETECLGACRNAPVVQINHD 148
Query: 685 YYEDLSVEDTKEIISKLKKDEKPK 756
YYE+L+ + KEII+ L + K
Sbjct: 149 YYENLTNDKIKEIINNLHAKDLQK 172
>UniRef50_Q6V9B3 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Chlamydomonas reinhardtii
Length = 282
Score = 157 bits (380), Expect = 7e-37
Identities = 77/169 (45%), Positives = 110/169 (65%), Gaps = 10/169 (5%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+K+ A+ P+L + Q++ GGWL ++AM++VA+ L++ + VYEVATFYTMF R IGKYHV
Sbjct: 84 YKQSAIIPVLDVTQQENGGWLSLAAMNRVAKLLDMAPIRVYEVATFYTMFNRTKIGKYHV 143
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND-- 681
Q+C TTPC L+GS I AI + +G + G F++ E+EC+GACVNAPM+ + D
Sbjct: 144 QICGTTPCRLQGSQKIEEAITKHLGIGIGQTTQDGLFTLGEMECMGACVNAPMVAIADYT 203
Query: 682 --------DYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGL 804
YYEDL+ +D I+ +KK KPKPG + R +EP G +
Sbjct: 204 KGVSGFEYIYYEDLTPKDIVNILDTIKKGGKPKPGSQY-RLKAEPAGAV 251
>UniRef50_A0E600 Cluster: Chromosome undetermined scaffold_8, whole
genome shotgun sequence; n=5; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_8, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 263
Score = 157 bits (380), Expect = 7e-37
Identities = 77/162 (47%), Positives = 112/162 (69%), Gaps = 1/162 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K+ PLL LAQ+Q +L +SAM K+A+ L +P+M VYE A+FY+MF R +GK+H+Q
Sbjct: 58 KKSGTIPLLMLAQKQNNNFLSLSAMKKIAKILEIPEMDVYETASFYSMFNRERVGKFHLQ 117
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY- 687
VC TTPC L GS I+ I+Q+ N + G + G +++ EVECLGAC NAPM+QVN+++
Sbjct: 118 VCGTTPCQLCGSKDIIKTIEQKLNIKNGETTADGLYTLQEVECLGACANAPMMQVNNEWV 177
Query: 688 YEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSL 813
YEDL+ E+T +++ L K+ K GP++GR +E G T+L
Sbjct: 178 YEDLTPENTLKLLEDL-KNGTDKKGPQNGRKNAEGPQGRTTL 218
>UniRef50_O22769 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor; n=8;
Viridiplantae|Rep: NADH-ubiquinone oxidoreductase 24 kDa
subunit, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 255
Score = 157 bits (380), Expect = 7e-37
Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 11/214 (5%)
Frame = +1
Query: 214 SSLFVHRATPAANPXSPLSARRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXGGWLP 393
++L H +P P P +S + + +K+ A+ PLL LAQ+Q GGWLP
Sbjct: 30 TALNYHLDSPDNKPDLPWEFSEANQSKVKEILSYYPSNYKQSAVIPLLDLAQQQNGGWLP 89
Query: 394 ISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQ 573
+SAM+ VA+ + + + VYEVATFY+MF R +GKYH+ VC TTPC +RGS I +A+
Sbjct: 90 VSAMNAVAKVIEVAPIRVYEVATFYSMFNRAKVGKYHLLVCGTTPCMIRGSRDIESALLD 149
Query: 574 ETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND----------DYYEDLSVEDTKEI 723
+ G + G FSV E+EC+G CVNAPMI V D +Y+ED++ E EI
Sbjct: 150 HLGVKRGEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYFEDVTPEKVVEI 209
Query: 724 ISKLKKDEKPKPGPRS-GRFASEPLGGLTSLTEE 822
+ KL+K EKP G ++ R P GG +L E
Sbjct: 210 VEKLRKGEKPPHGTQNPKRIKCGPEGGNKTLLGE 243
>UniRef50_A3U1M2 Cluster: ATP synthase subunit E; n=9;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicola batsensis HTCC2597
Length = 460
Score = 154 bits (373), Expect = 5e-36
Identities = 78/170 (45%), Positives = 107/170 (62%), Gaps = 1/170 (0%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKY- 501
G + A+ PLL AQ Q G WL A+ +A L++ + EVATFY MF P+G
Sbjct: 33 GRQASAIIPLLWRAQEQEG-WLTRPAIEHIAAMLDMAYIRALEVATFYFMFQLAPVGSVA 91
Query: 502 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
HVQ+C TT C + G++ ++ ++ + S GKFS EVECLGAC NAPM Q+
Sbjct: 92 HVQICGTTSCMICGAEDLIAVCQEMIAPKAHEVSADGKFSWEEVECLGACANAPMAQIGK 151
Query: 682 DYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTG 831
DYYEDL+ E +EI+ +L + + P PGP++GR+A+EPL GLTSLTE +G
Sbjct: 152 DYYEDLTAERLREILGELAEGKVPVPGPQNGRYAAEPLKGLTSLTEYDSG 201
>UniRef50_Q4QEG7 Cluster: NADH-ubiquinone oxidoreductase,
mitochondrial, putative; n=6; Trypanosomatidae|Rep:
NADH-ubiquinone oxidoreductase, mitochondrial, putative
- Leishmania major
Length = 273
Score = 152 bits (368), Expect = 2e-35
Identities = 76/173 (43%), Positives = 106/173 (61%), Gaps = 10/173 (5%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G + A PLL LAQ+Q GG++P++AM+K+A+ +P M V+E TFY+MF R P+GKYH
Sbjct: 73 GRRISATIPLLHLAQQQQGGYIPVTAMYKIAKICEVPPMHVFETVTFYSMFNRHPVGKYH 132
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND- 681
+Q C TTPC L G+D ++ N + G + G ++ E+ECLGACVNAPM+ V+D
Sbjct: 133 IQFCRTTPCMLCGADELMERTMHYLNVRMHGTTSDGLITIGEMECLGACVNAPMLVVSDY 192
Query: 682 --------DYYEDLSVEDTKEIISKLKKDEKPKPG-PRSGRFASEPLGGLTSL 813
DY EDL+ E K ++ L+ + K G R R +EP GG TSL
Sbjct: 193 SNPPNFSYDYMEDLTWESIKTLVENLRGGKPFKIGSQRLDRRYAEPAGGRTSL 245
>UniRef50_Q8G1B3 Cluster: NADH dehydrogenase I, E subunit; n=9;
Rhizobiales|Rep: NADH dehydrogenase I, E subunit -
Brucella suis
Length = 237
Score = 150 bits (363), Expect = 9e-35
Identities = 78/178 (43%), Positives = 110/178 (61%), Gaps = 3/178 (1%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIG-KY 501
G ++ A+ PLL AQ Q G W+ +++ VA LN+P + V EVATFYT F +P+G +
Sbjct: 36 GRQQSAVIPLLMRAQEQEG-WVTKASIEYVAAMLNMPLIRVLEVATFYTQFQLKPVGSRA 94
Query: 502 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
H+QVC TTPC LRGS+A+++ + + + + + G S EVEC GAC NAPM+ +
Sbjct: 95 HIQVCGTTPCMLRGSEALMDVCRHKIHHDPFELNADGTLSWEEVECQGACANAPMVMIFK 154
Query: 682 DYYEDLSVEDTKEIISKLK--KDEKPKPGPRSGRFASEPLGGLTSLTEEXTGXGFGVQ 849
D YEDL+ E EII + K + KPGP+ GR SEP GLT+LTE+ G++
Sbjct: 155 DAYEDLTPERLAEIIDAFEAGKGDTIKPGPQDGRVTSEPASGLTALTEDLDYKKIGLE 212
>UniRef50_A7DLV4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Methylobacterium extorquens PA1|Rep: NADH-quinone
oxidoreductase, E subunit - Methylobacterium extorquens
PA1
Length = 412
Score = 150 bits (363), Expect = 9e-35
Identities = 76/166 (45%), Positives = 99/166 (59%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G + A+ PLL AQ Q GGWLP A+ VA+ L +P + V EVATFYTMF P+G++
Sbjct: 36 GRQASAVIPLLWKAQEQNGGWLPQKAIEAVADELGMPHIRVLEVATFYTMFALEPVGRFW 95
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+QVC T PC G+ L A E G + G FS EVECLGAC NAPM+Q+N D
Sbjct: 96 IQVCGTVPCDCCGAKE-LKASLHERLGPSGKVTADGNFSWLEVECLGACCNAPMVQINQD 154
Query: 685 YYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEE 822
YYEDL+ E +++ L K G + GR +SEP + +LT+E
Sbjct: 155 YYEDLTPESLNKLMDDLAAGRPVKVGSQIGRVSSEPKDAVNTLTDE 200
>UniRef50_Q5DLW2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Nyctotherus ovalis|Rep: Hydrogenosomal
NADH dehydrogenase 24 kDa subunit - Nyctotherus ovalis
Length = 259
Score = 148 bits (359), Expect = 3e-34
Identities = 75/163 (46%), Positives = 109/163 (66%), Gaps = 3/163 (1%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+K+ A+ LL LAQ+Q G +L ++AM+KVA+ L + + VYEVA FY+MF R +GK +
Sbjct: 62 YKKSAVLYLLHLAQKQNGNFLTLAAMNKVAKILEMTNLNVYEVAAFYSMFNREKVGKIRL 121
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD- 684
Q+C TTPC L G+ I+ A + ++GG + G F++ EVECLG C NAPM+QVN++
Sbjct: 122 QICGTTPCLLCGARDIMKACEDHLGIKMGGTTKDGMFTLEEVECLGVCANAPMMQVNNEK 181
Query: 685 YYEDLSVEDTKEIISKLKKDEKPKPGPRS-GRFASE-PLGGLT 807
YEDL+ E E++ K +K E+ K GP++ GR +E PLG T
Sbjct: 182 VYEDLTPEIMPEMLEKFRKGEEIKAGPQTKGRKNAEGPLGRTT 224
>UniRef50_P29914 Cluster: NADH-quinone oxidoreductase chain 2; n=22;
Alphaproteobacteria|Rep: NADH-quinone oxidoreductase
chain 2 - Paracoccus denitrificans
Length = 239
Score = 148 bits (358), Expect = 3e-34
Identities = 74/178 (41%), Positives = 105/178 (58%), Gaps = 1/178 (0%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKY- 501
G ++ A+ P+L AQ Q G WL A+ A+ L +P + EVATFY MF +P+G
Sbjct: 33 GRQQSAIIPVLWRAQEQEG-WLSRPAIEYCADLLGMPYIRALEVATFYFMFQLQPVGSVA 91
Query: 502 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
H+Q+C TT C + G++ ++ K++ E S G+FS EVECLGAC NAPM Q+
Sbjct: 92 HIQICGTTTCMICGAEDLIRVCKEKIAPEPHALSADGRFSWEEVECLGACTNAPMAQIGK 151
Query: 682 DYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTGXGFGVQXA 855
D+YEDL+VE +I + E P PGP++GRF++E LGG T+L + G A
Sbjct: 152 DFYEDLTVEKLAALIDRFAAGEVPVPGPQNGRFSAEALGGPTALADLKGGEAHNASVA 209
>UniRef50_Q00RX3 Cluster: Putative NADH-ubiquinone oxidoreductase;
n=1; Ostreococcus tauri|Rep: Putative NADH-ubiquinone
oxidoreductase - Ostreococcus tauri
Length = 265
Score = 146 bits (355), Expect = 8e-34
Identities = 77/178 (43%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+KR AM PLL LAQ+Q G L ++ M+ +A+ L + + VYEVATFY+MF R+ +GK HV
Sbjct: 60 YKRSAMIPLLDLAQQQNKGHLTLAMMNHIADVLEVAPIRVYEVATFYSMFNRQKMGKLHV 119
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND-- 681
VC TTPC LRGS I A+++ + + CG F++ E+EC+G CVNAPMI V D
Sbjct: 120 MVCGTTPCMLRGSREIEKALEEWMGVKKFETTACGTFTLGEMECMGCCVNAPMIAVADYR 179
Query: 682 --------DYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTG 831
+YYEDL+ + ++ LK + P+ G + R +EP+ GLT+LT + +G
Sbjct: 180 NGVEGYSYNYYEDLTPQTAVKVCEALKAGKSPRVGSQI-RDKAEPIKGLTTLTGDPSG 236
>UniRef50_Q98KQ9 Cluster: NADH-ubiquinone dehydrogenase chain E 1;
n=3; Bacteria|Rep: NADH-ubiquinone dehydrogenase chain E
1 - Rhizobium loti (Mesorhizobium loti)
Length = 424
Score = 143 bits (347), Expect = 7e-33
Identities = 73/169 (43%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIG-KY 501
G ++ A+ PLL LAQ Q G W+ +A+ +++ L +P++ EVATFYT + P+G +
Sbjct: 36 GREQSAIIPLLMLAQEQEG-WVTKAAIETISDMLGMPRIRGLEVATFYTQYQLNPVGTRA 94
Query: 502 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
H+QVC TTPC LRGS+A+++ + + + + + G S EVECLGACVNAPM+ +
Sbjct: 95 HIQVCGTTPCMLRGSEALMDVCRSKIHHDQFHTNDKGTLSWEEVECLGACVNAPMVMIFK 154
Query: 682 DYYEDLSVEDTKEIIS--KLKKDEKPKPGPRSGRFASEPLGGLTSLTEE 822
D +EDL+ E EII K PGP++GR SEP GLT+L E
Sbjct: 155 DTFEDLTPERLAEIIDLYDAGKGASVAPGPQNGRTGSEPASGLTTLKSE 203
>UniRef50_P56909 Cluster: NADH-quinone oxidoreductase subunit E 1;
n=21; Rhizobiales|Rep: NADH-quinone oxidoreductase
subunit E 1 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 275
Score = 136 bits (330), Expect = 9e-31
Identities = 73/166 (43%), Positives = 103/166 (62%), Gaps = 3/166 (1%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIG-KY 501
G ++ A+ PLL AQ Q G W+ +A+ VA+ L + + V EVATFYT F +P+G +
Sbjct: 36 GREQSAVIPLLMRAQEQDG-WVTRAAIESVADMLGMAYIRVLEVATFYTQFQLQPVGTRA 94
Query: 502 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
HVQVC TTPC LRG++ ++ K++ E + G S EVEC GACVNAPM+ +
Sbjct: 95 HVQVCGTTPCMLRGAEDLIKICKKKIASEPFTLNEGGTLSWEEVECQGACVNAPMVMIFK 154
Query: 682 DYYEDLSVEDTKEIISKLK--KDEKPKPGPRSGRFASEPLGGLTSL 813
D +EDL+ E +EII + + K + PGP+ R S P+GGLT+L
Sbjct: 155 DTFEDLTPERLEEIIDRFEAGKGSEVVPGPQIDRVYSAPIGGLTTL 200
>UniRef50_A3UCV4 Cluster: ATP synthase subunit E; n=4;
Alphaproteobacteria|Rep: ATP synthase subunit E -
Oceanicaulis alexandrii HTCC2633
Length = 346
Score = 136 bits (328), Expect = 1e-30
Identities = 73/160 (45%), Positives = 100/160 (62%), Gaps = 6/160 (3%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K A+ PLL +AQ+Q W+ AM ++A +P + VYEVATFYTMF GK+ +Q
Sbjct: 36 KASAVIPLLWIAQKQDN-WVSEPAMREIAARCGMPYIRVYEVATFYTMFNLEQTGKHLIQ 94
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGN--SPCGKFSVSEVECLGACVNAPMIQVN-- 678
VC TTPCWLRG+D L A+ ++ + G S G + EVECLGAC NAPM+Q++
Sbjct: 95 VCGTTPCWLRGADD-LKAVCEKKIGKKGREHVSSDGMLAWEEVECLGACANAPMVQISNT 153
Query: 679 --DDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEP 792
D YYEDL+ E ++++ L+ ++ K GP SGR SEP
Sbjct: 154 EGDLYYEDLTAEALEQMLDDLRAGKEVKAGPISGRSCSEP 193
>UniRef50_Q83BQ9 Cluster: NADH dehydrogenase I, E subunit; n=3;
Coxiella burnetii|Rep: NADH dehydrogenase I, E subunit -
Coxiella burnetii
Length = 174
Score = 132 bits (318), Expect = 2e-29
Identities = 59/141 (41%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
KR A+ P L Q+Q GWL +AM+ +A+ L LP++ VYEVATFY M+ +P+GK+ +
Sbjct: 30 KRSAVVPALLFVQKQNNGWLSKAAMNALADYLQLPRIWVYEVATFYDMYNLKPMGKHKIS 89
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND-DY 687
+C PC+LRGSD I+ +K+ + + G F++ VEC+ AC APM Q++D +Y
Sbjct: 90 ICQNVPCFLRGSDEIVACVKERLGIDFDETTSDGLFTLKSVECMAACGGAPMCQIDDQEY 149
Query: 688 YEDLSVEDTKEIISKLKKDEK 750
+E+L+ E II KL+++ K
Sbjct: 150 HENLTPEKMIAIIDKLERESK 170
>UniRef50_P56910 Cluster: NADH-quinone oxidoreductase subunit E 2;
n=3; Rhizobiaceae|Rep: NADH-quinone oxidoreductase
subunit E 2 - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 168
Score = 117 bits (281), Expect = 7e-25
Identities = 54/140 (38%), Positives = 86/140 (61%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
+R A+ P L +AQ++ G LP + +VA+ L + ++ VYE+ATFYT+F PIG++H+Q
Sbjct: 17 RRSAIMPALMIAQKEHGH-LPGPVLEEVAQILGVERVWVYELATFYTLFHTEPIGRFHLQ 75
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
+C C L GS+A+L ++ G +P G F++S VECLGAC AP++QV DDY+
Sbjct: 76 LCDNVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLSTVECLGACEMAPVMQVGDDYH 135
Query: 691 EDLSVEDTKEIISKLKKDEK 750
+L ++ + E+
Sbjct: 136 GNLDAARLDALLESFRAAER 155
>UniRef50_Q11VB6 Cluster: NADH dehydrogenase I chain E; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I chain E -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 177
Score = 116 bits (279), Expect = 1e-24
Identities = 51/134 (38%), Positives = 82/134 (61%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G ++ A+ P+L +AQ + GGWLP M VA L++ + VYEVA+FY+M+ +P+GK
Sbjct: 28 GRQKSALLPVLHMAQDELGGWLPAPLMDYVASLLDITPIEVYEVASFYSMYNLKPVGKCM 87
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+ C T PC L G + ++ + + ++ S G+F++ VEC+G+C APM Q+
Sbjct: 88 FEFCQTGPCCLNGVEELIEYTEDKLGIKLNQTSADGRFTIKAVECMGSCGTAPMAQIGTY 147
Query: 685 YYEDLSVEDTKEII 726
YYE+L+ E +II
Sbjct: 148 YYENLTKEKIDKII 161
>UniRef50_A7HLQ9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=3; Thermotogaceae|Rep: NADH-quinone oxidoreductase, E
subunit - Fervidobacterium nodosum Rt17-B1
Length = 161
Score = 115 bits (277), Expect = 2e-24
Identities = 54/121 (44%), Positives = 73/121 (60%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
++P +AE LN+P VYEV TFYTMF +P GKY ++VCT+ PC + G I+
Sbjct: 39 YIPPEVGEMIAEELNIPSSKVYEVLTFYTMFSTKPRGKYIIRVCTSLPCHVPGGREIVQF 98
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKD 744
+KQ+ + G + G F++ E CLG C +P+I VND YY DL+VE EII LK
Sbjct: 99 LKQKLGVDFGETTKDGLFTLEETGCLGLCGVSPVIMVNDQYYGDLTVEKVNEIIENLKGG 158
Query: 745 E 747
E
Sbjct: 159 E 159
>UniRef50_Q6MIR6 Cluster: NADH dehydrogenase I chain E; n=1;
Bdellovibrio bacteriovorus|Rep: NADH dehydrogenase I
chain E - Bdellovibrio bacteriovorus
Length = 159
Score = 115 bits (276), Expect = 3e-24
Identities = 52/136 (38%), Positives = 83/136 (61%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K A+ P L +AQ++ G++ + +++ +++P+ + EV FYTMF ++P+GKYHVQ
Sbjct: 24 KESAIIPSLYIAQKENNGFITPEIIRTLSQVMDIPEARINEVFKFYTMFNQKPVGKYHVQ 83
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT C L G + I E + + G+F+VS+VECLG+C APM+QVND Y+
Sbjct: 84 VCTNISCALEGGREMAKHICHELGVKFDQVTADGRFTVSKVECLGSCGTAPMMQVNDSYH 143
Query: 691 EDLSVEDTKEIISKLK 738
E L+ E ++ +K
Sbjct: 144 EKLTPETAMNLLRGMK 159
>UniRef50_Q2LQE7 Cluster: NADH-quinone oxidoreductase chain F; n=1;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 574
Score = 115 bits (276), Expect = 3e-24
Identities = 54/143 (37%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMF-IRRPIGKYHV 507
K+ A+ P L LAQ++ L + VAE +++P Y +AT+Y+M+ + +P+G+YH+
Sbjct: 20 KQSALMPALMLAQKENANRLDQDDIRTVAELVDVPFGKAYGLATYYSMYNVEKPVGRYHL 79
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
QV T P L G+ IL+ +++ N G +P G F++SEVECL +C P+IQVND Y
Sbjct: 80 QVDTNIPATLMGAGEILDHLEKTLNIRAGETTPDGLFTLSEVECLASCGTCPVIQVNDVY 139
Query: 688 YEDLSVEDTKEIISKLKKDEKPK 756
YE+++ E ++ L+K P+
Sbjct: 140 YENMTREKVDSLLDSLRKGMMPE 162
>UniRef50_A6H1R0 Cluster: NADH dehydrogenase I, E subunit; n=2;
Bacteroidetes|Rep: NADH dehydrogenase I, E subunit -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 176
Score = 113 bits (271), Expect = 1e-23
Identities = 55/139 (39%), Positives = 82/139 (58%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
++ A+ P+L Q WL I KVAE L++ + VYEV +FYTM+ RRPIGKY +
Sbjct: 32 RKSALLPVLHEVQDAHENWLSIELQDKVAEILHIKPVEVYEVVSFYTMYNRRPIGKYMFE 91
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
C T+PC L G++ +++ + +VG + G F V VECLGAC APM+Q+ D Y
Sbjct: 92 FCQTSPCCLNGTENLMDYTCDKLGVKVGEPTADGLFEVRGVECLGACDYAPMMQLGDFYQ 151
Query: 691 EDLSVEDTKEIISKLKKDE 747
E L+ ++I+ K ++
Sbjct: 152 EHLTEAKIDQLIADCKDNK 170
>UniRef50_A2F771 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit family protein; n=2; Trichomonas vaginalis|Rep:
Respiratory-chain NADH dehydrogenase 24 Kd subunit
family protein - Trichomonas vaginalis G3
Length = 201
Score = 110 bits (265), Expect = 6e-23
Identities = 56/144 (38%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+KR A PLL L QR+ GG+L + +++ + + V+E A FY+MF +P + V
Sbjct: 44 NKRAATIPLLHLGQRENGGYLTTGVLQAISKIVGVTAGRVHETACFYSMFRFQPPNNHIV 103
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEV-GGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+VC C+L GSD + AI++ T G SP G+F++ EVECLGAC NAP++ ++
Sbjct: 104 EVCKGLSCYLTGSDNVKEAIQKATGGTFKEGKSPDGQFTLEEVECLGACANAPVMILDGV 163
Query: 685 YYEDLSVEDTKEIISKLKKDEKPK 756
YY++L+ E K II +K + K
Sbjct: 164 YYQNLTAETAKIIIECVKAGKSVK 187
>UniRef50_Q9PGJ1 Cluster: NADH-ubiquinone oxidoreductase, NQO2
subunit; n=13; Gammaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, NQO2 subunit - Xylella fastidiosa
Length = 175
Score = 110 bits (264), Expect = 8e-23
Identities = 50/137 (36%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
KR A+ L AQ Q GWL + VA+ L++P + YEVATFY+MF R +G+++V
Sbjct: 39 KRSALLQGLYAAQEQNQGWLTDELIAAVAKYLDIPSVWAYEVATFYSMFETRKVGRHNVA 98
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK-FSVSEVECLGACVNAPMIQVNDDY 687
CT CWL G++ +++ +++ C++G ++ G+ + E ECL AC APM+ +N Y
Sbjct: 99 FCTNVSCWLNGAEDLVSYAEEKLGCKLGQSTADGRVYLKCEEECLAACAGAPMMVINGHY 158
Query: 688 YEDLSVEDTKEIISKLK 738
+E L+ E +++ L+
Sbjct: 159 HERLTKEKVDQLLDGLE 175
>UniRef50_A6FCN2 Cluster: NuoE2 NADH I CHAIN E; n=1; Moritella sp.
PE36|Rep: NuoE2 NADH I CHAIN E - Moritella sp. PE36
Length = 207
Score = 109 bits (262), Expect = 1e-22
Identities = 53/142 (37%), Positives = 89/142 (62%), Gaps = 1/142 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
+R A+ P L LAQ G +L +A +AE L++P++ V+E+A+FYT++ + IGKY++Q
Sbjct: 28 QRSAIMPALYLAQDTYG-FLDETAYRAIAEILDIPEIWVFELASFYTLYKNKKIGKYNLQ 86
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
+CT PC LRG+ +L ++ G S G F+++ VEC+G+C AP + VN+ Y+
Sbjct: 87 LCTNVPCMLRGAYDLLGHLQTRLGINKGDTSTDGLFTLTTVECIGSCDLAPAMMVNETYH 146
Query: 691 EDLSVEDTKEIISKLKKDE-KP 753
+LS E +++ +L + KP
Sbjct: 147 TNLSKERVDKLLDQLSQSSIKP 168
>UniRef50_A5UZH6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Chloroflexi (class)|Rep: NADH-quinone
oxidoreductase, E subunit - Roseiflexus sp. RS-1
Length = 174
Score = 109 bits (262), Expect = 1e-22
Identities = 55/154 (35%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
HK A+ PLL +AQ + G +L +AM +VAE L++P V+EVA FY++ +P+GK+ +
Sbjct: 20 HKPSAVLPLLFIAQDEYG-YLTEAAMREVAELLDMPPTDVFEVAGFYSLLYEQPVGKWVL 78
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
QVC PC G++ ++ ++ + V +P G F++ V+CL C +AP++Q N +Y
Sbjct: 79 QVCDDVPCAFCGAEDLIATLQAKLGIGVDQTTPDGMFTLQRVKCLADCDHAPVLQANLEY 138
Query: 688 YEDLSV-EDTKEIISKLK-KDEKPKPGPRSGRFA 783
Y DL+ E +++++ L+ + E + SGR+A
Sbjct: 139 YHDLTTPEKVEQVLAMLRQRAESGEQLSISGRYA 172
>UniRef50_Q0EZQ5 Cluster: NADH dehydrogenase I chain E; n=1;
Mariprofundus ferrooxydans PV-1|Rep: NADH dehydrogenase
I chain E - Mariprofundus ferrooxydans PV-1
Length = 170
Score = 107 bits (256), Expect = 8e-22
Identities = 52/137 (37%), Positives = 82/137 (59%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
+ A+ P+L +AQ G +L + VA+ L L M V EV TFYTMF +P G Y ++V
Sbjct: 31 QSALMPVLYMAQEDFG-YLSMDVQQHVADVLGLRLMQVREVVTFYTMFREKPCGTYLLEV 89
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
CT C L G++ ++ + + +VG + G F+V+EVEC GAC AP++QVN Y+E
Sbjct: 90 CTNAGCMLNGANELVAHMCETLGIKVGETTDDGLFTVAEVECAGACGGAPVVQVNHTYHE 149
Query: 694 DLSVEDTKEIISKLKKD 744
++ E +I++++ D
Sbjct: 150 KVTPETMDALITQMRAD 166
>UniRef50_A1AVR6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; sulfur-oxidizing symbionts|Rep: NADH-quinone
oxidoreductase, E subunit - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 157
Score = 104 bits (250), Expect = 4e-21
Identities = 48/136 (35%), Positives = 78/136 (57%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K A+ L + Q + L + VA+ L++P + V EVATFY + + +GKY ++
Sbjct: 22 KSSAVMQTLKIIQAENENKLSADTIQAVADYLDMPDIAVQEVATFYENYNHKKVGKYVIR 81
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
C C L G+D ++ ++ + + +P G SV +VECLGACV APM Q+ND+Y+
Sbjct: 82 FCHNISCMLNGADDLIAYLENKLGVQTDEVTPDGLISVKKVECLGACVGAPMFQINDEYF 141
Query: 691 EDLSVEDTKEIISKLK 738
E+L+ + +I+ LK
Sbjct: 142 ENLTFDKIDKIVDNLK 157
>UniRef50_Q9S5X7 Cluster: Fe-hydrogenase, subunit gamma; n=5;
Thermotogaceae|Rep: Fe-hydrogenase, subunit gamma -
Thermotoga maritima
Length = 164
Score = 103 bits (247), Expect = 1e-20
Identities = 51/142 (35%), Positives = 83/142 (58%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G+KR + +L L ++ +LP ++ V+ + +P +Y VATFY F +P GKY
Sbjct: 19 GYKRENLIKIL-LEIQEIYRYLPEDVINYVSTAMGIPPAKIYGVATFYAQFSLKPKGKYT 77
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+ VC T C + GS +L AI++ET G + FS+ +V CLGAC AP++ +N +
Sbjct: 78 IMVCDGTACHMAGSPEVLKAIEEETGLTPGNVTEDLMFSLDQVGCLGACALAPVMVINGE 137
Query: 685 YYEDLSVEDTKEIISKLKKDEK 750
Y +L+ + KEI+ K+K+ E+
Sbjct: 138 VYGNLTADKVKEILRKIKEKER 159
>UniRef50_Q0AZ71 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein precursor; n=4; Clostridiales|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit-like
protein precursor - Syntrophomonas wolfei subsp. wolfei
(strain Goettingen)
Length = 182
Score = 103 bits (247), Expect = 1e-20
Identities = 52/140 (37%), Positives = 76/140 (54%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
H++G++ +L AQ G+LP+S + +A L + VY +ATFYT F +P GKY +
Sbjct: 34 HEKGSLIAILQQAQ-DIYGYLPLSVLKCIARELGIKPAKVYGIATFYTQFRLQPAGKYQI 92
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
C T C + GS+ I + + QE + G +P G FS+ CLG C AP++ +N
Sbjct: 93 MFCQGTACHVNGSERIESTLCQELKIKRGETTPDGLFSLESAACLGCCSLAPVMMINGQA 152
Query: 688 YEDLSVEDTKEIISKLKKDE 747
Y LS E II K+K E
Sbjct: 153 YGPLSAEKAIAIIRKIKAAE 172
>UniRef50_A0UV12 Cluster: NADH-quinone oxidoreductase, E subunit;
n=8; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Clostridium cellulolyticum H10
Length = 163
Score = 103 bits (247), Expect = 1e-20
Identities = 49/135 (36%), Positives = 78/135 (57%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
RGA+ P+L Q + G+L + +++E LN+ +Y V TFYT F P G++ + +
Sbjct: 29 RGALIPVLHEVQ-EVYGYLSEDVLKEISEKLNVSLAEIYGVVTFYTQFSLNPKGRFKINI 87
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C T C+++GS IL K++ +VG + GKFS+ C+GAC AP+I +NDD +
Sbjct: 88 CMGTACYVKGSGEILEKFKEKLGIDVGQCTEDGKFSLDACRCIGACGLAPVIMINDDVHG 147
Query: 694 DLSVEDTKEIISKLK 738
L +D + I+ K K
Sbjct: 148 RLLPDDVEAILEKYK 162
>UniRef50_Q6A6G2 Cluster: NADH dehydrogenase I chain E; n=1;
Propionibacterium acnes|Rep: NADH dehydrogenase I chain
E - Propionibacterium acnes
Length = 261
Score = 102 bits (245), Expect = 2e-20
Identities = 50/139 (35%), Positives = 81/139 (58%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
R A+ P+L L Q G P+ + AE L + V VATFYTM+ + P G++H+ V
Sbjct: 55 RSALLPILHLVQSVDGRISPVG-IETAAEVLGITTAQVSGVATFYTMYKKHPAGQHHIGV 113
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
CTT C + G + +L ++++ + G +P GKFS+ VEC AC AP++ VN +Y +
Sbjct: 114 CTTALCAVMGGEEVLARVEKKLGIKEGQTTPDGKFSLERVECNAACDFAPIMMVNWEYMD 173
Query: 694 DLSVEDTKEIISKLKKDEK 750
+++ +EI+ L +DE+
Sbjct: 174 NMTPIRAEEILDSLARDEE 192
>UniRef50_Q9RU91 Cluster: NADH dehydrogenase I, E subunit; n=2;
Deinococcus|Rep: NADH dehydrogenase I, E subunit -
Deinococcus radiodurans
Length = 207
Score = 102 bits (244), Expect = 2e-20
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
+R A+ PLL Q G++ + ++AE V V +FY+ + P G+YH+Q
Sbjct: 25 RRSALMPLLREVQ-DAEGFVAAPRLAEIAELCGTTATEVRSVMSFYSTYHTVPTGRYHLQ 83
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD-Y 687
VC+T C L GSDA+ + + + + G +P G+FSV +VECLG+C AP++Q+ND+ +
Sbjct: 84 VCSTLMCALAGSDALWDELVTRLDVQPGEVTPDGRFSVQKVECLGSCGTAPVLQLNDEGF 143
Query: 688 YEDLSVEDTKEIISKLKKDEKP 753
YE + E+++ L+ D+KP
Sbjct: 144 YERVGPARLAELLAALQADQKP 165
>UniRef50_Q8ABI7 Cluster: NADH-ubiquinone oxidoreductase subunit;
n=3; Bacteroides|Rep: NADH-ubiquinone oxidoreductase
subunit - Bacteroides thetaiotaomicron
Length = 158
Score = 102 bits (244), Expect = 2e-20
Identities = 51/138 (36%), Positives = 76/138 (55%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G+ G + +L AQ G +LP +A L +P VY V TFYT F P GK+
Sbjct: 22 GNNAGELINILHEAQHLHG-YLPEEMQRIIASKLRIPVSKVYGVVTFYTFFTMTPKGKHP 80
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+ VC T C++RGS+ +L K+ EVG +P GK+S+ + C+GAC AP++ + +
Sbjct: 81 ISVCMGTACYVRGSEKLLEEFKRVLGIEVGETTPDGKYSLDCLRCVGACGLAPVVMIGEK 140
Query: 685 YYEDLSVEDTKEIISKLK 738
Y L D K+II +L+
Sbjct: 141 VYGRLQPVDVKKIIEELE 158
>UniRef50_A7HII1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=2; Anaeromyxobacter|Rep: NADH-quinone oxidoreductase,
E subunit - Anaeromyxobacter sp. Fw109-5
Length = 188
Score = 101 bits (241), Expect = 5e-20
Identities = 52/136 (38%), Positives = 75/136 (55%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K AM P L + Q + G+L + A+ L EVATFY MF RPIG++ V+
Sbjct: 54 KAAAMLPALRIGQ-EIFGYLTPAVQRLAADRLGTSPARAEEVATFYVMFNTRPIGRHLVE 112
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT C L G D + +K + GG S G+ ++ EVECLGAC AP + V+++ Y
Sbjct: 113 VCTNVSCCLTGGDRLFEYLKHKYGVTNGGTSQDGRVTLREVECLGACGTAPAMLVDEEMY 172
Query: 691 EDLSVEDTKEIISKLK 738
E L + +EI+ +L+
Sbjct: 173 ERLDPKKVEEILGRLE 188
>UniRef50_A1WXW3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Halorhodospira halophila SL1|Rep: NADH-quinone
oxidoreductase, E subunit - Halorhodospira halophila
(strain DSM 244 / SL1) (Ectothiorhodospirahalophila
(strain DSM 244 / SL1))
Length = 170
Score = 100 bits (239), Expect = 9e-20
Identities = 49/137 (35%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMF-IRRPIGKYHV 507
+ A+ P L + Q GGWL S + A+ + +P+ +EVATFY+MF + P+G++ V
Sbjct: 33 RASAIIPALHILQDDNGGWLERSHVAAAADYIGMPRASAFEVATFYSMFHLDEPVGRHKV 92
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFS-VSEVECLGACVNAPMIQVNDD 684
CT C L G+D ++ +++ +G +P G+ + V E ECL AC APM+ V+
Sbjct: 93 NFCTNISCCLNGADELVAYAEEKLGIRLGETTPDGRITLVREEECLAACTRAPMMVVDGH 152
Query: 685 YYEDLSVEDTKEIISKL 735
YY L+ E EI+ L
Sbjct: 153 YYTHLTRERIDEILDGL 169
>UniRef50_Q8RBD2 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=3; Thermoanaerobacter|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit - Thermoanaerobacter
tengcongensis
Length = 169
Score = 99 bits (238), Expect = 1e-19
Identities = 44/134 (32%), Positives = 79/134 (58%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
G++ ++ AQ + G+LPI +++ + +P ++ ++TFY+ F +P GKY + +C
Sbjct: 37 GSLIAVMNDAQ-EIFGYLPIEVQLFISQEMKVPLTEIFGISTFYSRFTLKPSGKYKINLC 95
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
T C++RG+ +L IK++ EVG + GKFS+ CLGAC AP++ +N + +
Sbjct: 96 MGTACYVRGAAMLLEKIKEKLGIEVGETTEDGKFSLEPTRCLGACALAPVMMINGEVFGR 155
Query: 697 LSVEDTKEIISKLK 738
L+ D EI+ K +
Sbjct: 156 LTPNDVDEILKKFE 169
>UniRef50_Q1IS36 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Acidobacteria bacterium Ellin345|Rep: NADH-quinone
oxidoreductase, E subunit - Acidobacteria bacterium
(strain Ellin345)
Length = 160
Score = 99 bits (238), Expect = 1e-19
Identities = 52/140 (37%), Positives = 78/140 (55%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
KR + P L Q + G +L A+ ++A + L + V V ++Y+M +PIGKY+VQ
Sbjct: 21 KRSPLVPFLLYVQDEVG-YLSDEAIVEIANRVELTPLEVRNVISYYSMLRTKPIGKYNVQ 79
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT C RG + I K+ +P G FS+ EVEC+GAC AP +QVN D++
Sbjct: 80 VCTNICCLQRGGEDIFEHCKKTLGIGHKQTTPDGLFSLEEVECIGACSWAPAVQVNYDFH 139
Query: 691 EDLSVEDTKEIISKLKKDEK 750
E+L+ E +I +K E+
Sbjct: 140 ENLTPETMDAVIESYRKREQ 159
>UniRef50_A7CUG1 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Opitutaceae bacterium TAV2|Rep: NADH-quinone
oxidoreductase, E subunit - Opitutaceae bacterium TAV2
Length = 163
Score = 99 bits (238), Expect = 1e-19
Identities = 47/137 (34%), Positives = 82/137 (59%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
KR A PLL L Q + G++ AM +A+ L + ++ V EV TFY MF R+PIG+ H++
Sbjct: 21 KRSATLPLLHLIQ-EDAGYISDEAMEWIADKLGIERIHVLEVVTFYPMFRRKPIGRRHIK 79
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC T C L G + +++E + + SP G+ +V VECL +C AP++ +++ +
Sbjct: 80 VCRTLSCALMGGYKVCETMQKEFDTHLNEVSPDGEVTVEFVECLASCGTAPVVMIDETLH 139
Query: 691 EDLSVEDTKEIISKLKK 741
E+++ +E+ + +K+
Sbjct: 140 ENVTPARARELAALIKQ 156
>UniRef50_A4SXP9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=51; Burkholderiales|Rep: NADH-quinone oxidoreductase,
E subunit - Polynucleobacter sp. QLW-P1DMWA-1
Length = 168
Score = 99 bits (238), Expect = 1e-19
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
HK+ A+ L AQ + G W+ + VA+ L +P + V EVATFY M+ +PIGKY +
Sbjct: 26 HKQSAVMACLIAAQTEVG-WVSPEVIEAVAQILEMPTIAVDEVATFYNMYNTKPIGKYKL 84
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD- 684
+CT PC L + +K+ +PCG F++ E EC+GAC ++P++ VND
Sbjct: 85 VICTNLPCQLTHGETAATYLKETLGIGFNETTPCGTFTLKEGECMGACGDSPVMLVNDKR 144
Query: 685 YYEDLSVEDTKEIISKLKKDEK 750
+S E ++S+L+ K
Sbjct: 145 MCSFMSKEKIDALLSELRAGGK 166
>UniRef50_Q02CT9 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Solibacter usitatus Ellin6076|Rep: NADH-quinone
oxidoreductase, E subunit - Solibacter usitatus (strain
Ellin6076)
Length = 160
Score = 99.5 bits (237), Expect = 2e-19
Identities = 50/141 (35%), Positives = 80/141 (56%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G +R AM P+L AQ + G + + +VA + + + V EV T+Y+M R+P+GKYH
Sbjct: 21 GRQRSAMIPMLMYAQDELG-CVSDELIAEVARRIGVTPLQVNEVLTYYSMLHRKPLGKYH 79
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
VQVCT C L D + ++ + G+FS+ EVEC+GAC AP IQ+N D
Sbjct: 80 VQVCTNISCLLHDGDKLYEHTCKKLGITHKEVTADGQFSIEEVECMGACSWAPAIQINYD 139
Query: 685 YYEDLSVEDTKEIISKLKKDE 747
++ ++ E +++ L+K +
Sbjct: 140 FHHYVTPEKLDQLLDGLRKKQ 160
>UniRef50_A6PRE1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 176
Score = 99.5 bits (237), Expect = 2e-19
Identities = 46/132 (34%), Positives = 78/132 (59%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
+RG++ +L AQ G +L VA LN+ + VY V +FY+ FI +PIG+Y +
Sbjct: 41 RRGSLIQILHRAQHLFG-YLSEEVQSFVAARLNISRAEVYGVISFYSYFIDQPIGRYKIN 99
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT T C+++G+ +L+ K+ G ++P GKF + + C+GAC AP++ VN+ Y
Sbjct: 100 VCTGTACFVKGAPKVLDEFKRRLEIREGESTPDGKFFLGALRCVGACSLAPVVMVNEKVY 159
Query: 691 EDLSVEDTKEII 726
+++ E +I+
Sbjct: 160 GNVTAEKVADIL 171
>UniRef50_Q9WXM7 Cluster: NADP-reducing hydrogenase, subunit A; n=4;
Thermotogaceae|Rep: NADP-reducing hydrogenase, subunit A
- Thermotoga maritima
Length = 176
Score = 97.9 bits (233), Expect = 5e-19
Identities = 49/139 (35%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K+ A+ +L AQ + G+LP + +++ L++P VY V TFY F +P GK+ ++
Sbjct: 38 KKDALIQVLHKAQ-ELFGYLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIK 96
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN-DDY 687
VC T C+++G+D I +E + G FSV V CLGAC AP++ V+ DD+
Sbjct: 97 VCLGTACYVKGADRIFERFLEELKVNPDEPTSDGMFSVHGVRCLGACSMAPVVMVDEDDF 156
Query: 688 YEDLSVEDTKEIISKLKKD 744
Y ++ + +IISK K++
Sbjct: 157 YGRVTPDMVPQIISKYKRE 175
>UniRef50_Q82TU7 Cluster: Respiratory-chain NADH dehydrogenase 24 Kd
subunit; n=27; Proteobacteria|Rep: Respiratory-chain
NADH dehydrogenase 24 Kd subunit - Nitrosomonas europaea
Length = 162
Score = 97.5 bits (232), Expect = 6e-19
Identities = 47/127 (37%), Positives = 72/127 (56%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K+ A+ L +AQ + G WL M +A+ L +P + VYEVATFY M+ +P+GKY +
Sbjct: 26 KQSAVMSALAIAQDEKG-WLATETMDFIADYLEMPAIAVYEVATFYNMYNLKPVGKYKLT 84
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT PC L G + + +KQ+ + G F++ E EC+G+C +AP++ VN+
Sbjct: 85 VCTNLPCALSGGNQTADYLKQKLGIGFNETTTDGLFTLKEGECMGSCGDAPVLLVNNKRM 144
Query: 691 EDLSVED 711
ED
Sbjct: 145 CSFMTED 151
>UniRef50_Q1EVZ9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium oremlandii OhILAs|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
oremlandii OhILAs
Length = 166
Score = 97.5 bits (232), Expect = 6e-19
Identities = 47/132 (35%), Positives = 77/132 (58%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
GA+ P L Q G+LP A+ V+E L++P +Y VA+FY++F P G++ + VC
Sbjct: 33 GALIPALHKIQ-SIYGYLPEEALILVSEELDIPITQIYGVASFYSLFSLEPKGQHVISVC 91
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
T C+++GS IL + E N + G + GKF++ C+GAC AP+I +++ Y
Sbjct: 92 LGTACYVKGSQNILERLSSELNIQEGNTTEDGKFTLQATRCIGACGLAPVIMIDEKVYGR 151
Query: 697 LSVEDTKEIISK 732
L+ D +I+S+
Sbjct: 152 LTPSDVPKILSE 163
>UniRef50_A4J9N9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=11; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Desulfotomaculum reducens
MI-1
Length = 177
Score = 97.5 bits (232), Expect = 6e-19
Identities = 47/132 (35%), Positives = 74/132 (56%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
+GA+ +L AQ G +LP +A L +P VY V +FY+ F +P GK+ + V
Sbjct: 36 KGALIEILHKAQHIFG-YLPRDVQLFIARKLGIPGAEVYGVVSFYSYFTTKPSGKHTISV 94
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C T C++RG+D I+ K+ E + G F++ +V C+GAC AP++ V+D Y
Sbjct: 95 CMGTACFVRGADKIVEKFKERLGIESNETTEDGLFTIKDVRCIGACGLAPVVMVDDKVYG 154
Query: 694 DLSVEDTKEIIS 729
+ VED +II+
Sbjct: 155 RVKVEDVDDIIN 166
>UniRef50_A3ERJ3 Cluster: NADH ubiquinone oxidoreductase 24 kD
subunit; n=2; Leptospirillum|Rep: NADH ubiquinone
oxidoreductase 24 kD subunit - Leptospirillum sp. Group
II UBA
Length = 168
Score = 97.1 bits (231), Expect = 8e-19
Identities = 46/146 (31%), Positives = 82/146 (56%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
++ GA+ +L Q + G ++P A+ V E L +PK +Y V TFY+ F + P GK+ +
Sbjct: 23 NREGAVVQILQKVQEKYG-YVPADALEFVGEILEIPKSKMYGVLTFYSQFYQEPRGKFVL 81
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
++C T C +RG+ +++ +K+E + E G N+ F++ V CLG+C APM V
Sbjct: 82 KICVGTACHVRGAGLLVDKVKEELHIEPGENTEDMLFTLEPVACLGSCALAPMAMVQGTA 141
Query: 688 YEDLSVEDTKEIISKLKKDEKPKPGP 765
Y LS + +I + +++ + + P
Sbjct: 142 YGKLSADKMVSLIRQFEEEAEKEEEP 167
>UniRef50_Q5JIQ1 Cluster: NADH:ubiquinone oxidoreductase, subunit E;
n=2; cellular organisms|Rep: NADH:ubiquinone
oxidoreductase, subunit E - Pyrococcus kodakaraensis
(Thermococcus kodakaraensis)
Length = 154
Score = 97.1 bits (231), Expect = 8e-19
Identities = 47/134 (35%), Positives = 76/134 (56%)
Frame = +1
Query: 340 AMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCT 519
++ PLL Q + G +LP + ++A L +P VY VATFY F P+GKY V+VC
Sbjct: 17 SLIPLLQRTQERFG-YLPREVLEEIANYLGIPLSRVYGVATFYAQFRFEPLGKYVVKVCH 75
Query: 520 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 699
T C + G+ I A+K+E E G + G ++ V CLG C AP+I +N+ + L
Sbjct: 76 GTACHVNGAVNIAQALKEELGIEEGQTTEDGLVTLERVACLGCCSLAPVIMINEKVFGKL 135
Query: 700 SVEDTKEIISKLKK 741
+ + ++++ +LK+
Sbjct: 136 TPDKVRKLVKQLKE 149
>UniRef50_Q6MDR2 Cluster: Putative NADH-ubiquinone oxidoreductase
chain E; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative NADH-ubiquinone oxidoreductase chain
E - Protochlamydia amoebophila (strain UWE25)
Length = 159
Score = 95.1 bits (226), Expect = 3e-18
Identities = 48/138 (34%), Positives = 74/138 (53%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+KR A+ P L LAQ + G +LPI +++A +L V + TFY MF P+GK+ +
Sbjct: 7 NKRSALIPALHLAQAEKG-YLPIEVQNELAFLFDLEPSEVNSIVTFYDMFFEEPVGKHVI 65
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
VC C LRG+D L + Q+ + G + G+F+V ECL AC AP++ V+D
Sbjct: 66 HVCKNISCMLRGADGFLARLCQKMHISPGETTQDGEFTVIASECLAACDKAPVMIVDDKV 125
Query: 688 YEDLSVEDTKEIISKLKK 741
+ + + I K K+
Sbjct: 126 IGPVEITQIDDYIQKAKQ 143
>UniRef50_A4J528 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Desulfotomaculum reducens MI-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Desulfotomaculum reducens MI-1
Length = 158
Score = 94.7 bits (225), Expect = 5e-18
Identities = 45/136 (33%), Positives = 77/136 (56%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G+ G + + + + Q G+LP + + AE L +P VY VATFY F RP G++
Sbjct: 23 GNPNGLIVVMAAIQESQ--GYLPKDLLVRTAEELGVPLSDVYGVATFYAAFSLRPRGRHS 80
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
V +C T C+++G+ + + +++E + G + +FS+ V CLGAC AP++ VN +
Sbjct: 81 VNLCLGTACYVKGAPEVQSMLEKEMGIKAGNTTEDRRFSLDLVRCLGACGIAPVLTVNGE 140
Query: 685 YYEDLSVEDTKEIISK 732
Y ++ E E++SK
Sbjct: 141 VYPRMTAEKVTEVLSK 156
>UniRef50_A1HP41 Cluster: NADH-quinone oxidoreductase, E subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, E
subunit - Thermosinus carboxydivorans Nor1
Length = 166
Score = 94.7 bits (225), Expect = 5e-18
Identities = 48/133 (36%), Positives = 75/133 (56%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
+GA+ P+L AQ G +L + +AE L++P +Y V TFY F P G+ ++V
Sbjct: 33 KGALIPVLQEAQNAYG-YLSKEVIEYIAEKLDIPVSQIYGVVTFYAQFHLNPRGRNIIRV 91
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C T C +RG+ AIL A++ GG + KF++ V C+GAC AP++ +NDD +
Sbjct: 92 CQGTACHVRGAKAILKALEDNLKITAGGTTADLKFTLETVACIGACGLAPVMMINDDTHG 151
Query: 694 DLSVEDTKEIISK 732
L+ E I++K
Sbjct: 152 RLTPEVIPSILAK 164
>UniRef50_P65574 Cluster: NADH-quinone oxidoreductase subunit E;
n=23; Actinomycetales|Rep: NADH-quinone oxidoreductase
subunit E - Mycobacterium bovis
Length = 252
Score = 94.7 bits (225), Expect = 5e-18
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
+R A+ PLL L Q + +L + + A+ L L V VA+FYTM+ RRP G+Y V
Sbjct: 54 RRSALLPLLHLVQGEDS-YLTPAGLRFCADQLGLTGAEVSAVASFYTMYRRRPTGEYLVG 112
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT T C + G DAI + +K+ + G ++ +EC AC AP++ VN +++
Sbjct: 113 VCTNTLCAVMGGDAIFDRLKEHLGVGHDETTSDGVVTLQHIECNAACDYAPVVMVNWEFF 172
Query: 691 EDLSVEDTKEIISKLKKDEKPKP---GPRSG-RFASEPLGGL 804
++ + E +E++ L+ D P P G R S L GL
Sbjct: 173 DNQTPESARELVDSLRSDTPKAPTRGAPLCGFRQTSRILAGL 214
>UniRef50_Q092T1 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit; n=2; Cystobacterineae|Rep: NADH-ubiquinone
oxidoreductase 24 kDa subunit - Stigmatella aurantiaca
DW4/3-1
Length = 162
Score = 93.9 bits (223), Expect = 8e-18
Identities = 48/135 (35%), Positives = 75/135 (55%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K M P L L Q GW P + VA+ L + YEVA+FY M+ + GKY +
Sbjct: 30 KSAGMLPALRLLQ-DLKGWCPPEGIRLVAKNLEVTPERAYEVASFYVMYHLKKPGKYTID 88
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT C LRG++ +L ++ + + G + F++ E ECL +C AP +QVN+D++
Sbjct: 89 VCTNLSCSLRGAEKMLAYLENKLGLKAGEANE--TFTLRETECLASCGTAPCLQVNEDHH 146
Query: 691 EDLSVEDTKEIISKL 735
E+L+ E+++KL
Sbjct: 147 ENLTKARVDELLAKL 161
>UniRef50_Q2RHR8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Moorella thermoacetica ATCC 39073|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Moorella thermoacetica (strain ATCC 39073)
Length = 157
Score = 93.5 bits (222), Expect = 1e-17
Identities = 42/117 (35%), Positives = 68/117 (58%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G+LP + +A+ L L VY V +FY F +P GKY V VC T C+++G+ AIL
Sbjct: 39 GYLPRNVQVAIADGLGLSLSQVYSVVSFYNHFTTKPKGKYQVSVCMGTACFVKGAPAILE 98
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 732
++QE +VG + G+F++++V CLG C P++ VN + L+ + EI+ +
Sbjct: 99 RLEQELGTKVGDTTADGRFTINQVRCLGCCALGPVMTVNQKAHGRLTPDTALEILKE 155
>UniRef50_Q2JFL6 Cluster: NADH-quinone oxidoreductase, E subunit;
n=5; Actinomycetales|Rep: NADH-quinone oxidoreductase, E
subunit - Frankia sp. (strain CcI3)
Length = 262
Score = 93.5 bits (222), Expect = 1e-17
Identities = 52/171 (30%), Positives = 82/171 (47%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G R A+ PLL L Q + G + + A+ L + + V VATFYTM+ R P+G Y
Sbjct: 21 GRSRSALLPLLHLVQAEQG-CVTAQGVAFCADVLGITRAEVGAVATFYTMYKRHPVGDYL 79
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
V VCT C L G + + + + +P G ++ ECL AC AP++ VN +
Sbjct: 80 VSVCTNLSCALLGGEDVYERVSKLLGVGHDETTPDGSITLEHAECLAACDYAPVMTVNYE 139
Query: 685 YYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTGXG 837
+Y+ + + + I+ L+ +P P R G PL ++ + G G
Sbjct: 140 FYDQVDPDSAQAIVEDLRAGRRPAP-TRGG-----PLCSFAEVSRQLAGFG 184
>UniRef50_Q3ZXM4 Cluster: Hydrogenase subunit HymA; n=13; cellular
organisms|Rep: Hydrogenase subunit HymA -
Dehalococcoides sp. (strain CBDB1)
Length = 161
Score = 93.1 bits (221), Expect = 1e-17
Identities = 43/115 (37%), Positives = 68/115 (59%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
WLP A++KV++ LN+P VY VATFY +F P GK++V VC T C + G+ IL+
Sbjct: 44 WLPKEALYKVSQTLNVPVNRVYHVATFYKLFSVIPKGKHNVSVCVGTACHVFGAPKILDR 103
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS 729
+++ + G + KFS+ V CLG C P++ V+ Y+ L D ++I++
Sbjct: 104 LEKSLGIKAGETTSDLKFSLETVNCLGCCALGPVVVVDGHYHGKLPTADAEKILA 158
>UniRef50_A3THI9 Cluster: ATP synthase subunit E; n=3;
Actinomycetales|Rep: ATP synthase subunit E - Janibacter
sp. HTCC2649
Length = 417
Score = 92.7 bits (220), Expect = 2e-17
Identities = 57/175 (32%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
KR A+ PLL L Q G++ + AE L L + V VATFYT + R P G+Y V
Sbjct: 45 KRSALLPLLHLVQ-SVDGYVTGRGIDFCAEVLELSRAEVSGVATFYTQYKRHPNGEYTVG 103
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VCT T C + G D I +++ + + GK ++ +EC AC AP++ N +++
Sbjct: 104 VCTNTLCAIMGGDEIWDSVSEHLGIGHDETTDDGKVTLERIECNAACDYAPVVMANWEFF 163
Query: 691 EDLSVEDTKEIISKLKKDE--KPKPGPR---SGRFASEPLGGLT-SLTEEXTGXG 837
++ + E T +++ L+ KP GP S + S L G L +E G G
Sbjct: 164 DNQTPESTNQLVDDLRAGTPVKPTRGPNSLCSFKQMSRVLAGFNDGLADEGVGAG 218
>UniRef50_Q1PWG7 Cluster: Similar to to proton-translocating NADH
dehydrogenase I, 24 kDa subunit; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: Similar to to
proton-translocating NADH dehydrogenase I, 24 kDa
subunit - Candidatus Kuenenia stuttgartiensis
Length = 164
Score = 91.9 bits (218), Expect = 3e-17
Identities = 47/137 (34%), Positives = 76/137 (55%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
H RG++ P+L Q G +LP + V+E LN+ + VATFY F RP G++ +
Sbjct: 28 HGRGSLIPILQTIQTAYG-YLPEKVVDFVSERLNISVNEIIGVATFYAQFHMRPRGRHII 86
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
+ C+ T C ++G+ I+ + ++ + VG + F++ EV CLGAC AP+I V++D
Sbjct: 87 KACSGTACHVKGAKQIIEKLGKKLDIPVGETTKDTMFTLEEVACLGACSLAPVIMVDEDV 146
Query: 688 YEDLSVEDTKEIISKLK 738
Y L II ++K
Sbjct: 147 YGQLLHNTVGNIIDEIK 163
>UniRef50_A5D2H5 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelotomaculum thermopropionicum SI|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelotomaculum thermopropionicum SI
Length = 192
Score = 91.9 bits (218), Expect = 3e-17
Identities = 46/139 (33%), Positives = 75/139 (53%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
+G + +L AQ G+LP +AE L +P V V TFY++F RP GKY + V
Sbjct: 49 KGQLIRILQKAQ-DIFGYLPDDVQAFIAERLRVPVAEVNGVVTFYSLFSTRPKGKYIINV 107
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C T C+++G+ +++A+K+ + G +P G F++ C+GAC AP++ VN
Sbjct: 108 CMGTACYVKGAQQVMDALKKRLKIDEGETTPDGLFTLKSTRCVGACGLAPILAVNGKVQG 167
Query: 694 DLSVEDTKEIISKLKKDEK 750
+ +E+I +K EK
Sbjct: 168 MVDPGKIQELIKNCRKGEK 186
>UniRef50_Q67JG1 Cluster: Putative iron hydrogenase small subunit
gamma; n=3; Firmicutes|Rep: Putative iron hydrogenase
small subunit gamma - Symbiobacterium thermophilum
Length = 186
Score = 91.5 bits (217), Expect = 4e-17
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G+LP VA L++P VY V TFY F P+GKY + VC T C+++G+ +L+
Sbjct: 46 GFLPEEVQRHVAAALHVPPSEVYGVVTFYNYFTLTPVGKYPINVCMGTACYVQGAGRLLS 105
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKK 741
++E + G +P G FS+ CLGAC AP++ V + + L+ D +++++L++
Sbjct: 106 LFERELGIQPGQVTPDGLFSLEVCRCLGACGLAPVVTVAGEVHGKLTESDALKLVAELRQ 165
Query: 742 ---DEKPKPG 762
E+P+ G
Sbjct: 166 RAAAEQPQAG 175
>UniRef50_Q1PYY2 Cluster: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase; n=2; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to nuoE subunit of the
NADH:ubiquinone oxidoreductase - Candidatus Kuenenia
stuttgartiensis
Length = 162
Score = 91.5 bits (217), Expect = 4e-17
Identities = 45/128 (35%), Positives = 74/128 (57%)
Frame = +1
Query: 343 MXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTT 522
+ P+L Q + G +LP++AM +V+ ++P +Y V TFY+ F + P GK+ V++C
Sbjct: 33 LIPILQEMQEEYG-YLPLTAMEEVSVRTDIPLSRIYGVVTFYSQFSQVPRGKHTVRLCAG 91
Query: 523 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 702
T C ++G+ I I + G +P KF+ V CLG C AP++ ++D YY L+
Sbjct: 92 TACHIKGAPDIGEKIADVLQVKEGETTPDYKFTHKTVACLGTCFLAPVMMIDDRYYGKLT 151
Query: 703 VEDTKEII 726
E T+EI+
Sbjct: 152 EEKTEEIL 159
>UniRef50_O66842 Cluster: NADH-quinone oxidoreductase subunit E;
n=2; Aquifex aeolicus|Rep: NADH-quinone oxidoreductase
subunit E - Aquifex aeolicus
Length = 160
Score = 91.1 bits (216), Expect = 6e-17
Identities = 44/117 (37%), Positives = 66/117 (56%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G++P ++ +A+ L LP V V FY MF R KY ++VC + C L G++ +L
Sbjct: 42 GYIPPESLKPLADMLELPLNHVEGVVAFYDMFDREDKAKYRIRVCVSIVCHLMGTNKLLK 101
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 732
A++ + G +P GKF + V+CLGAC AP+ VNDD Y+ S EI+S+
Sbjct: 102 ALENILGIKPGEVTPDGKFKIVPVQCLGACSEAPVFMVNDDEYKFESEVQLNEILSR 158
>UniRef50_Q1PW48 Cluster: Similar to NADH:ubiquinone oxidoreductase
24 kDa subunit, mitochondrial; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Similar to NADH:ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial -
Candidatus Kuenenia stuttgartiensis
Length = 152
Score = 90.6 bits (215), Expect = 7e-17
Identities = 44/140 (31%), Positives = 74/140 (52%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G+ + A P+L Q + G +LP+ + +V E + K +Y VATFY F P G+
Sbjct: 14 GNTKEASIPILQSIQEEYG-YLPLDVLDQVCEESEITKSHLYGVATFYAQFKLTPKGRNA 72
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
++VC T C ++G+D + A+K + ++ + G FS+ V CLG C AP+I +N+D
Sbjct: 73 IKVCKGTACHVKGADITIVAMKDQLGIDIDQTTEDGAFSMETVACLGCCSLAPVIMINED 132
Query: 685 YYEDLSVEDTKEIISKLKKD 744
+ S + + K K+
Sbjct: 133 VFGGFSSAKVRGTLKKYGKE 152
>UniRef50_Q746S5 Cluster: NADH dehydrogenase I, E subunit; n=4;
Desulfuromonadales|Rep: NADH dehydrogenase I, E subunit
- Geobacter sulfurreducens
Length = 162
Score = 89.8 bits (213), Expect = 1e-16
Identities = 46/132 (34%), Positives = 70/132 (53%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
R A ++ QR G WL A+ + AE L L + V E+ATFY M RRP+GK + V
Sbjct: 21 REAAVDVMKALQRHYG-WLTDEAVGEAAELLGLTPLQVEELATFYEMIYRRPVGKRVIHV 79
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C + CW G ++++ + N E GG + G F++ CLG C AP + V D +
Sbjct: 80 CDSISCWALGGESLMAHLAAALNIEPGGTTADGLFTLLPCCCLGNCGEAPTLMVGDTLHG 139
Query: 694 DLSVEDTKEIIS 729
+++E EI++
Sbjct: 140 RVTLERAGEILA 151
>UniRef50_Q3A461 Cluster: NADP-reducing hydrogenase chain A; n=5;
Deltaproteobacteria|Rep: NADP-reducing hydrogenase chain
A - Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 173
Score = 89.4 bits (212), Expect = 2e-16
Identities = 44/133 (33%), Positives = 74/133 (55%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K G + +L AQ G +LP VA+ + + VY V +FYT F P GK+ +
Sbjct: 39 KEGHLVTVLHKAQSLFG-YLPKEVQEFVADHMEVSLAQVYGVVSFYTFFTMIPKGKHPIS 97
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC T C+++G+D +++A K + V + GKFS+ + C+GAC AP++ V + Y
Sbjct: 98 VCMGTACFVKGADKVVDAFKNQLGVTVSEVTRDGKFSIDCLRCVGACALAPVVLVGEKVY 157
Query: 691 EDLSVEDTKEIIS 729
+++ + K+II+
Sbjct: 158 ANVTPDQVKDIIA 170
>UniRef50_P0AFD3 Cluster: NADH-quinone oxidoreductase subunit E;
n=66; Gammaproteobacteria|Rep: NADH-quinone
oxidoreductase subunit E - Shigella flexneri
Length = 166
Score = 89.4 bits (212), Expect = 2e-16
Identities = 41/135 (30%), Positives = 75/135 (55%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
R A L + Q+Q G W+P A+H +A+ L +P V VATFY+ R+P+G++ ++
Sbjct: 33 RAASIEALKIVQKQRG-WVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRY 91
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C + C + G I A++++ N + G + G+F++ CLG C P + +++D +
Sbjct: 92 CDSVVCHINGYQGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHA 151
Query: 694 DLSVEDTKEIISKLK 738
L+ E E++ + K
Sbjct: 152 HLTPEAIPELLERYK 166
>UniRef50_A0LLS9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Syntrophobacter fumaroxidans MPOB|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 151
Score = 88.6 bits (210), Expect = 3e-16
Identities = 48/139 (34%), Positives = 70/139 (50%)
Frame = +1
Query: 313 FTL*GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPI 492
FT KR A+ P+L Q + G +LP AM A + VY V+TFY F P+
Sbjct: 9 FTRHDRKRDALIPVLQDIQGEFG-YLPPHAMQAAARHCRTSAVEVYGVSTFYAQFKFSPV 67
Query: 493 GKYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQ 672
G++ V VC T C + G IL K + + G +P G F++ V C+GAC +P +
Sbjct: 68 GRHTVTVCQGTACHVMGGHRILEECKSQLGVQPGQTTPDGMFTLETVACIGACALSPAVV 127
Query: 673 VNDDYYEDLSVEDTKEIIS 729
V+ D Y + E EI++
Sbjct: 128 VDKDTYGRMKPERITEILN 146
>UniRef50_A1ALP3 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; Pelobacter propionicus DSM 2379|Rep: NADH-quinone
oxidoreductase, E subunit - Pelobacter propionicus
(strain DSM 2379)
Length = 154
Score = 88.2 bits (209), Expect = 4e-16
Identities = 39/108 (36%), Positives = 65/108 (60%)
Frame = +1
Query: 412 VAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 591
+A L LP M V E T+YTMF R P+G + ++VC C L G++ I++ + Q+ +
Sbjct: 46 IANYLGLPAMQVKEALTWYTMFYRHPVGTHVIKVCRNIACSLMGAERIIDHLSQKLGIKP 105
Query: 592 GGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 735
G + G+F++ VECL +C AP++Q++D Y+E L+ +I+ L
Sbjct: 106 GETTADGRFTLLLVECLASCGTAPVMQIDDTYHEQLTEAKIDQILKGL 153
>UniRef50_Q2LYE8 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE; n=1; Syntrophus aciditrophicus SB|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit NuoE -
Syntrophus aciditrophicus (strain SB)
Length = 173
Score = 87.8 bits (208), Expect = 5e-16
Identities = 42/139 (30%), Positives = 77/139 (55%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G K A+ L L + +LP A+ V++ L +P +YE+ATFY +F +P GKY
Sbjct: 32 GEKSAAVAVLQDLQEEFR--YLPKEALTIVSDELQVPLSRIYEIATFYNVFSLKPRGKYL 89
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
++VC T C ++G ++N +++ N G + F++ EV CLG C AP+++++ +
Sbjct: 90 IEVCAGTACHVQGGFNLMNRLERNLNISCGETTEDAMFTLEEVRCLGCCSLAPVVRIDGN 149
Query: 685 YYEDLSVEDTKEIISKLKK 741
+ L+ ++ I+ +K
Sbjct: 150 IHPYLTQDEIPGILKNYRK 168
>UniRef50_A0LJN9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Deltaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 163
Score = 87.4 bits (207), Expect = 7e-16
Identities = 40/118 (33%), Positives = 64/118 (54%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G++ AM + A L + + + E+ATFY R P+G+Y + VC + CW+ G I++
Sbjct: 36 GYMTDEAMEEAAGILGMTTLELEELATFYDHIYRSPVGRYVIHVCDSAVCWMEGYQRIID 95
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 735
+ Q VGG SP G F++ V C+G C AP + +N + Y L+ E I+ +L
Sbjct: 96 YLCQRLKLTVGGTSPDGLFTLLPVCCIGYCDRAPAMMINRNVYGRLTREKIDRILDRL 153
>UniRef50_Q0AWA4 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit NuoE precursor; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: NADH:ubiquinone
oxidoreductase 24 kD subunit NuoE precursor -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 166
Score = 87.0 bits (206), Expect = 9e-16
Identities = 41/118 (34%), Positives = 68/118 (57%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
+LP SA+ AE + +P VY +ATFY F +P G+++++VC T C ++GS+ +L+
Sbjct: 40 YLPRSALELTAEYVGVPFSQVYSMATFYRAFSLQPRGRFNIKVCDGTTCHIKGSNILLDE 99
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 738
I + G + +FS+ V C+GAC AP + VN+ Y ++ KEII + +
Sbjct: 100 IHKNLGIGPGETTADREFSLETVNCIGACAIAPALLVNERVYPRVNAAALKEIIKEYR 157
>UniRef50_Q67P18 Cluster: NADH dehydrogenase I subunit E; n=1;
Symbiobacterium thermophilum|Rep: NADH dehydrogenase I
subunit E - Symbiobacterium thermophilum
Length = 274
Score = 85.8 bits (203), Expect = 2e-15
Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 3/146 (2%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGG-WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKY 501
G +R A+ PLL LA R+ G ++ S + VAE + V V +FYTMF R+P+GKY
Sbjct: 28 GRERSAILPLLHLAMREREGRYIAQSDIEAVAEICGVAPSYVQSVCSFYTMFRRQPVGKY 87
Query: 502 HVQVCTTTPC-WLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEV-ECLGACVNAPMIQV 675
+ VC C L G ++ +++ +VG +P G ++ ECL AC AP+I V
Sbjct: 88 LITVCGNMACHLLAGGSQLVEHMEKTLGIKVGETTPDGLITLEVTGECLAACDLAPVIHV 147
Query: 676 NDDYYEDLSVEDTKEIISKLKKDEKP 753
+ +Y ++ E +++ L+ E P
Sbjct: 148 DTEYVVKVTREKFDALVAALRAGEGP 173
>UniRef50_Q0AVX7 Cluster: Fe-hydrogenase, gamma subunit; n=4;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
Fe-hydrogenase, gamma subunit - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 148
Score = 85.8 bits (203), Expect = 2e-15
Identities = 36/118 (30%), Positives = 69/118 (58%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
++P A+ A+ ++P+ Y VATFY+ P GK +++C + PC + G+D ++ A
Sbjct: 31 YIPEDAVVYAAQVFDIPEAKAYGVATFYSYLKVGPRGKNVIRICESAPCHIAGADKVVAA 90
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 738
+++E ++G +P GKF++ EC+G C P+I +N Y D++ + I+++ K
Sbjct: 91 LEKELGIKMGETTPDGKFTLEFAECVGQCQATPVITINSQPYGDVTADKIAAILTEYK 148
>UniRef50_Q2AG84 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Halothermothrix orenii H
168
Length = 167
Score = 85.4 bits (202), Expect = 3e-15
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 1/138 (0%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G + + P+L Q++ +LP + +A ++L VY VATFY F P GKY
Sbjct: 22 GKDQSKLIPILQEVQKEYR-YLPEEILTYIATVMDLSPATVYGVATFYAQFSLDPKGKYV 80
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGG-NSPCGKFSVSEVECLGACVNAPMIQVND 681
+ VC T C + GS +LNAI+++ N E G + F+V V CLGAC AP++ +N
Sbjct: 81 INVCDGTACHVSGSLPVLNAIRKKLNLEDGKFTTDDLMFTVETVSCLGACGLAPVVTING 140
Query: 682 DYYEDLSVEDTKEIISKL 735
Y ++ E + II +L
Sbjct: 141 KVYGKMTPEAIEVIIDEL 158
>UniRef50_Q6SGN4 Cluster: NADH-quinone oxidoreductase, E subunit;
n=1; uncultured bacterium 463|Rep: NADH-quinone
oxidoreductase, E subunit - uncultured bacterium 463
Length = 167
Score = 85.0 bits (201), Expect = 4e-15
Identities = 36/115 (31%), Positives = 64/115 (55%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
GW+ ++ +A L++ + +ATFY + RRP+G + +C + CW++G D +
Sbjct: 47 GWVSDESLSAIAAHLHMSADELDGIATFYNLIYRRPVGDKVILLCNSISCWIKGCDNLQQ 106
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEII 726
I +E E+G + ++++ V CLGAC AP++ V D+ +EDL E I+
Sbjct: 107 RITEELGVELGETTSDNRYTLLPVTCLGACDKAPVMMVGDELHEDLCEESIIRIL 161
>UniRef50_A5FSK9 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 155
Score = 85.0 bits (201), Expect = 4e-15
Identities = 39/138 (28%), Positives = 76/138 (55%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G R ++ P L Q + G ++P A++ + E L++P + +Y + TFY++ GKY
Sbjct: 17 GSSRLSLLPCLEAVQEECG-YIPHEAVNYLRECLSIPSIDIYGMITFYSLLSTNQKGKYV 75
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+++C + PC+L G++ IL+ + E G + +F++ V CLG C +P + +N
Sbjct: 76 IRLCNSLPCYLNGTENILDTLVDNLGIEPGQTTLDRRFTLELVPCLGLCDQSPAMVINGV 135
Query: 685 YYEDLSVEDTKEIISKLK 738
Y L+ + E++ +L+
Sbjct: 136 VYGKLTAQLVTEVLDELR 153
>UniRef50_Q0PIE2 Cluster: NAD(P)H-quinone oxidoreductase 24 kDa
subunit; n=1; Heliobacillus mobilis|Rep: NAD(P)H-quinone
oxidoreductase 24 kDa subunit - Heliobacillus mobilis
Length = 171
Score = 84.2 bits (199), Expect = 6e-15
Identities = 38/116 (32%), Positives = 65/116 (56%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
++P +M +A+ L LP +Y +ATFY RP GK+ +++C T C +R S + N
Sbjct: 39 FIPRESMELIADYLELPLSKIYSLATFYKALSLRPKGKHVIKICDGTACHIRSSQMLANE 98
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 732
+ G + G+FS+ V CLGAC AP+I +++ +Y ++ +EII++
Sbjct: 99 LYTLLKIRPGETTEDGQFSIEMVNCLGACAIAPVIVIDETFYGKVTPAKLQEIIAQ 154
>UniRef50_A4M6K3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Petrotoga mobilis SJ95
Length = 154
Score = 83.0 bits (196), Expect = 1e-14
Identities = 40/119 (33%), Positives = 65/119 (54%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G++ + ++A+ ++PK +Y V +FY+MF P GKY V+VC + C L S ++
Sbjct: 36 GFISEEDILRIAQKRDIPKARLYGVISFYSMFHLEPTGKYIVRVCDSVSCRLNESADLVR 95
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 738
A+K E + KF++ ECLG C P++ VND YY L+V +I+ L+
Sbjct: 96 ALKDYLKVEENETTKDKKFTLEVAECLGHCDEGPVMMVNDTYYTHLTVTKAIQILDSLE 154
>UniRef50_O27591 Cluster: NADP-reducing hydrogenase, subunit A; n=1;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
NADP-reducing hydrogenase, subunit A - Methanobacterium
thermoautotrophicum
Length = 149
Score = 83.0 bits (196), Expect = 1e-14
Identities = 44/136 (32%), Positives = 71/136 (52%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
GHK + P+L Q G +LP A+ +VA + + +Y VATFY F +P G+ H
Sbjct: 14 GHK-SEIIPILQDIQDAYG-YLPEDALEEVASFTGVSRAHLYGVATFYAQFRFKPRGRKH 71
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+ VCT T C + G++ +L+A+++ E G + ++S+ V C+G C AP VND+
Sbjct: 72 IMVCTGTACHVSGAEQVLDALERHLGIEEGDVTDDMEYSLESVGCIGCCSLAPCAMVNDE 131
Query: 685 YYEDLSVEDTKEIISK 732
+ +I K
Sbjct: 132 VVSRIKPSRVGKIFPK 147
>UniRef50_Q4AHT8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 172
Score = 82.6 bits (195), Expect = 2e-14
Identities = 41/139 (29%), Positives = 74/139 (53%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K+G + P+L Q G++P A K+ E + L +Y VATFY F P+GK+ ++
Sbjct: 33 KKGNLIPVLQGVQ-SIFGYVPREAFIKLNEEMGLQLSDMYGVATFYAQFRLNPVGKHIIK 91
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC T C ++ + I A+++E + G + F++ V CLG C AP++ + D+ +
Sbjct: 92 VCHGTACHVQSATKITEALEKELGVKDGHTTEDNLFTLESVACLGCCSLAPVMMIGDETF 151
Query: 691 EDLSVEDTKEIISKLKKDE 747
L+ + +I +++ E
Sbjct: 152 GSLNGKKAARVIKDIRRKE 170
>UniRef50_Q74GA4 Cluster: NADH dehydrogenase I, E subunit; n=6;
Geobacter|Rep: NADH dehydrogenase I, E subunit -
Geobacter sulfurreducens
Length = 173
Score = 82.2 bits (194), Expect = 3e-14
Identities = 41/132 (31%), Positives = 75/132 (56%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
G + P+L Q + G ++P + VAE LN+ ++ V TFY F +P G++ ++VC
Sbjct: 36 GNLMPVLQGIQDEYG-YVPRPTIDLVAERLNVYPSQIFGVLTFYAQFHLKPRGRFIIRVC 94
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
T C ++G+ I++ ++ +P +++ +V CLGAC AP+ VNDD +
Sbjct: 95 VGTACHVQGAPRIVDTFFEKLGIGHAETTPDLRYTFEKVACLGACGMAPLAMVNDDTFGK 154
Query: 697 LSVEDTKEIISK 732
++V+ +EII++
Sbjct: 155 MTVQKVEEIIAE 166
>UniRef50_Q6FE68 Cluster: NADH dehydrogenase I chain E; n=5;
Moraxellaceae|Rep: NADH dehydrogenase I chain E -
Acinetobacter sp. (strain ADP1)
Length = 170
Score = 82.2 bits (194), Expect = 3e-14
Identities = 36/135 (26%), Positives = 74/135 (54%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+ R A L QR+ GW+ + M+ +A+ L++ + VATFY R+P+G++ +
Sbjct: 35 YPRAASLDALKCVQRR-NGWVDDAQMNAIAQMLSISVADLEGVATFYNRIYRQPVGRHVI 93
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
+C + C+L G++ + A ++E + G + G+F++ + CLG C P + +++D
Sbjct: 94 LLCDSIACFLMGAETLAEAFQRELGIQYGQTTADGRFTLLPICCLGNCDKGPTLMIDEDT 153
Query: 688 YEDLSVEDTKEIISK 732
+ + V K+++ K
Sbjct: 154 HGLVDVSSVKQLLEK 168
>UniRef50_A0UVM6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Clostridium cellulolyticum H10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Clostridium
cellulolyticum H10
Length = 163
Score = 81.4 bits (192), Expect = 4e-14
Identities = 41/132 (31%), Positives = 70/132 (53%)
Frame = +1
Query: 352 LLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPC 531
+L L LP + VAE L++P VY V TFY+MF P G+Y V+VC + PC
Sbjct: 29 MLELQSMSGTNSLPHEWVVFVAEALDMPVSKVYSVITFYSMFGTEPRGRYLVEVCKSGPC 88
Query: 532 WLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVED 711
+ G+ +L ++++ + G + F++ + C GAC AP I++ + Y +L+ E
Sbjct: 89 HVSGAKNVLQLLEEKLGIKPGQTTQDRVFTLIQSSCFGACDIAPAIKIGEKVYGNLTSEK 148
Query: 712 TKEIISKLKKDE 747
EI+ ++ +
Sbjct: 149 LSEIVDSYREGQ 160
>UniRef50_Q89AU3 Cluster: NADH-quinone oxidoreductase subunit E;
n=1; Buchnera aphidicola (Baizongia pistaciae)|Rep:
NADH-quinone oxidoreductase subunit E - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 171
Score = 81.0 bits (191), Expect = 6e-14
Identities = 36/123 (29%), Positives = 69/123 (56%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
R ++ +L Q+ G W+ + ++A L + K + E+ATFY+ R+PIG+ ++
Sbjct: 38 RSSLIEILKFVQKSYG-WISNELITELACILKISKCDIEEIATFYSQIFRQPIGRNIIKY 96
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C + C++ G + I ++++ N VG + KF++ + CLG C +P I +NDD Y
Sbjct: 97 CDSVVCYVNGCEKIRCSLEKNLNVNVGETTKDFKFTLLPICCLGNCDKSPTIMINDDLYS 156
Query: 694 DLS 702
+++
Sbjct: 157 NVT 159
>UniRef50_A0J5R7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Shewanella woodyi ATCC 51908|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Shewanella
woodyi ATCC 51908
Length = 179
Score = 80.6 bits (190), Expect = 8e-14
Identities = 38/133 (28%), Positives = 70/133 (52%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
G L L Q + G W+ +++H ++ +P + VATFY + R+P+GK + C
Sbjct: 41 GITIDALKLIQAERG-WVSDASLHALSLYTQIPVADLDSVATFYNLIFRQPVGKVVLHPC 99
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C L G + I +KQ+ N G + +F++ + CLGAC AP++ N +E+
Sbjct: 100 DGISCDLMGGEHIRQCLKQQLNITAGETTTDNRFTLIPLPCLGACDKAPVMIANKQLFEN 159
Query: 697 LSVEDTKEIISKL 735
++ ++ +++S L
Sbjct: 160 MTTDELPKLLSTL 172
>UniRef50_Q3A640 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit; n=1; Pelobacter carbinolicus DSM 2380|Rep:
NADH:ubiquinone oxidoreductase 24 kD subunit -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 159
Score = 80.2 bits (189), Expect = 1e-13
Identities = 37/135 (27%), Positives = 74/135 (54%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
H G + PLL Q G +LP+S ++E ++ +Y V TFY+ F ++ V
Sbjct: 25 HPSG-LIPLLEKVQELLG-YLPLSIQEYISEKTHISPNRIYGVVTFYSFFTMEARARHRV 82
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
Q+C T C+++G+DA++ I+ + G ++ G+F+ + C+GAC AP++ ++ +
Sbjct: 83 QLCLGTACYVKGADAMVEKIENDYQINFGESTEDGRFTFEKARCVGACGLAPVVIIDGEV 142
Query: 688 YEDLSVEDTKEIISK 732
+ ++V+ I+ +
Sbjct: 143 FGKVTVDSLDGILEQ 157
>UniRef50_Q608Y0 Cluster: NADH dehydrogenase I, E subunit; n=5;
Bacteria|Rep: NADH dehydrogenase I, E subunit -
Methylococcus capsulatus
Length = 157
Score = 79.8 bits (188), Expect = 1e-13
Identities = 34/135 (25%), Positives = 69/135 (51%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
H A L + QR G W+ + ++AE L + + +ATFY + RRP+G+ +
Sbjct: 20 HPSAAAIEALNIVQRSHG-WISDELLQEIAELLGMSPAELDSIATFYNLIYRRPVGRRVI 78
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
C + CW+ G++ + ++ VG + G++++ + CLGAC AP++ + D+
Sbjct: 79 HYCNSVSCWMLGAEDNRRHLSEKLGIAVGETTGNGEYTLLPIVCLGACDKAPVLMIGDET 138
Query: 688 YEDLSVEDTKEIISK 732
+ ++ +I+ +
Sbjct: 139 HFNVDPARLDDILGE 153
>UniRef50_Q2S5I9 Cluster: NADH-ubiquinone oxidoreductase 24 kDa
subunit, putative; n=2; Sphingobacteriales genera
incertae sedis|Rep: NADH-ubiquinone oxidoreductase 24
kDa subunit, putative - Salinibacter ruber (strain DSM
13855)
Length = 249
Score = 79.8 bits (188), Expect = 1e-13
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
+ A+ +L LAQ + G +L + A+ L++ Y VATFY + + G Y + V
Sbjct: 72 QAAIMKVLWLAQEKFG-YLAPEVIQLCADTLDMTFTQAYGVATFYHQYFKEEKGTYVLDV 130
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV-NDDYY 690
CT C + G +L+ ++++ G + G F++ E ECLG+C +APM+++ N Y
Sbjct: 131 CTCFTCQVCGGYDVLHYLEEKLGVHAGETTDDGMFTIQEAECLGSCGSAPMMEITNGVYV 190
Query: 691 EDLSVEDTKEIISKLKKDEKP 753
+L+ + +++ L+ E P
Sbjct: 191 HNLTPDKIDDLVESLRAGEVP 211
>UniRef50_A0LGJ1 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB)
Length = 162
Score = 79.8 bits (188), Expect = 1e-13
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G+LP +VAE L L +Y V TFY F P G++ + VC T C+++G+ +L
Sbjct: 43 GYLPKWVQVQVAEGLGLSLQEIYGVTTFYAFFSLIPRGRHKLSVCAGTACYVKGTKNVLK 102
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN-DDYYEDLSVEDTKEIIS 729
++ + G +P +F++ V C+GAC AP + VN D + L E EI+S
Sbjct: 103 GVRDAIGIKPGQTTPDSRFTMEIVRCIGACGLAPAVIVNGKDVHGRLEAEQIPEILS 159
>UniRef50_Q7NZH7 Cluster: NADH-ubiquinone oxidoreductase, chain E;
n=8; Betaproteobacteria|Rep: NADH-ubiquinone
oxidoreductase, chain E - Chromobacterium violaceum
Length = 166
Score = 79.0 bits (186), Expect = 2e-13
Identities = 35/90 (38%), Positives = 53/90 (58%)
Frame = +1
Query: 412 VAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 591
VA L + + YEVATFY M+ +P+GK+ + VCT PC L G I ++ +
Sbjct: 57 VANYLGIAPVAAYEVATFYNMYDMKPVGKFKITVCTNLPCALSGGVNAAEYISKKLGIAI 116
Query: 592 GGNSPCGKFSVSEVECLGACVNAPMIQVND 681
G S G +++ E EC+GAC +AP++ VN+
Sbjct: 117 GETSADGMYTLLEGECMGACGDAPVLLVNN 146
>UniRef50_A6PPY8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Victivallis vadensis ATCC BAA-548|Rep:
NADH dehydrogenase (Ubiquinone), 24 kDa subunit -
Victivallis vadensis ATCC BAA-548
Length = 170
Score = 78.6 bits (185), Expect = 3e-13
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = +1
Query: 412 VAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 591
VA + +P VY VATFY F +P GKY +++C T C ++ S ILNA+ ++
Sbjct: 54 VATSIGVPPSRVYGVATFYAHFSMQPKGKYIIKLCDGTACHVKKSHGILNALYEKLKLSG 113
Query: 592 GGNSPCGK-FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEK 750
+ + F++ V CLGAC AP++ VN++ Y + E EI+ ++ +EK
Sbjct: 114 DKRTSDDQLFTIETVSCLGACGLAPVMVVNEEVYGQCTPEKAIEIVDRIIAEEK 167
>UniRef50_A5FS13 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=3; Dehalococcoides|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Dehalococcoides sp. BAV1
Length = 154
Score = 78.6 bits (185), Expect = 3e-13
Identities = 41/137 (29%), Positives = 68/137 (49%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K+ + P+L QR +L M KVA + +P+ VY +ATFY+ F P G + V
Sbjct: 19 KKENLIPILLAFQRNFS-YLSRDMMQKVAAYVGVPESSVYNIATFYSQFRLEPPGIHRVH 77
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC T C + G++ +L I++ + G + + S+ + C G C AP ++V+ Y
Sbjct: 78 VCRGTACHVMGAERLLRNIEKRLGIKAGETTLDNEISLDTINCAGICGLAPTLEVDGKLY 137
Query: 691 EDLSVEDTKEIISKLKK 741
L+ I+ K K+
Sbjct: 138 TRLNGSSLNRILGKKKR 154
>UniRef50_Q4AMU5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Chlorobium phaeobacteroides BS1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Chlorobium
phaeobacteroides BS1
Length = 195
Score = 78.2 bits (184), Expect = 4e-13
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G A PLL Q + G +LP AM + ++ +Y VATFY+ F P+G++
Sbjct: 23 GKSVSAAVPLLQAVQNEYG-YLPREAMDIIVAETDVGASQLYGVATFYSQFRLDPVGRHV 81
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNC--EVGGNSPCGKFSVSEVECLGACVNAPMIQVN 678
++VC T C + G+D I A++Q E + G ++V +V C+G C AP++ +
Sbjct: 82 IKVCHGTACHVSGADRINTALRQSLGIKNEDEDTASNGSYTVEDVACIGCCSLAPVMVIG 141
Query: 679 DDYYEDLSVEDTKEIISK 732
D+ + +L D + + K
Sbjct: 142 DETFGNLKGTDAQRSLKK 159
>UniRef50_A3DCI7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Clostridium|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Clostridium thermocellum
(strain ATCC 27405 / DSM 1237)
Length = 165
Score = 77.8 bits (183), Expect = 6e-13
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 3/124 (2%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
++P +++ L + + ++ VATFY F P GKY ++VC T C +R S I+
Sbjct: 41 YIPKEVFPYLSKKLKVSEARIFSVATFYENFSLEPKGKYIIKVCDGTACHVRKSIPIIER 100
Query: 565 IKQETNCEVGGNSPCG---KFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 735
+++E + G P F+V V CLGAC AP+I VND Y +++ + E+I +L
Sbjct: 101 LRKELG--LSGTKPTTDDLMFTVETVSCLGACGLAPVITVNDKVYAEMTPDKASELIKQL 158
Query: 736 KKDE 747
++ +
Sbjct: 159 REGD 162
>UniRef50_Q0C8X0 Cluster: Putative uncharacterized protein; n=1;
Aspergillus terreus NIH2624|Rep: Putative
uncharacterized protein - Aspergillus terreus (strain
NIH 2624)
Length = 312
Score = 77.8 bits (183), Expect = 6e-13
Identities = 36/73 (49%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Frame = +1
Query: 616 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKD-----EKPKPGPRSGRF 780
+++ +ECLGACVNAPM+Q+NDDYYEDL+ E K +++ LK+ + P PGP SGR
Sbjct: 217 YTMYNLECLGACVNAPMVQINDDYYEDLTPESIKALLTALKESSTGSAKVPAPGPLSGRQ 276
Query: 781 ASEPLGGLTSLTE 819
E GLT+L +
Sbjct: 277 TCENSAGLTNLRD 289
Score = 60.9 bits (141), Expect = 7e-08
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 217 SLFVHRATPAANPXSPLSARRP-IKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXGGWLP 393
SL VHR P NP P +K + + +K+ A+ P+L L QRQ G +
Sbjct: 135 SLSVHRNKPNNNPSIPFKFNEQNLKLIDEILKRYPP-QYKKAAVMPILDLGQRQHG-FTS 192
Query: 394 ISAMHKVAEXLNLPKMXVYEVATFYTMF 477
IS M++VA L +P M VYEVATFYTM+
Sbjct: 193 ISVMNEVARLLEMPPMRVYEVATFYTMY 220
>UniRef50_A5UZ48 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=10; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Roseiflexus sp. RS-1
Length = 178
Score = 77.4 bits (182), Expect = 7e-13
Identities = 42/114 (36%), Positives = 62/114 (54%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
++ A+ +L AQ + G+L + +A L+LP VY VATFY F P G++
Sbjct: 35 YRPDALIEVLHRAQ-ELFGYLSTDLLLFIANSLHLPPSRVYGVATFYHFFSLAPKGEHSC 93
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 669
VC T C++RG+ AIL A +Q + G +P G+ S+ CLGAC AP +
Sbjct: 94 VVCLGTACYVRGAAAILAAAEQMLGIKAGHTTPDGRLSLETARCLGACGIAPTV 147
>UniRef50_A0RMD2 Cluster: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit; n=1; Campylobacter fetus subsp. fetus
82-40|Rep: Hydrogenosomal NADH dehydrogenase 24 kDa
subunit - Campylobacter fetus subsp. fetus (strain
82-40)
Length = 163
Score = 77.4 bits (182), Expect = 7e-13
Identities = 41/137 (29%), Positives = 68/137 (49%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
R + P L + QR G ++ + + + L + M E FY+MF ++ GK+ ++
Sbjct: 24 RALVLPSLWMVQRAQG-FIDAKDVLYLEKTLGIRSMFYAEAIGFYSMFNQKSKGKFELKF 82
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE 693
C T C LRGSD ++ + ++G S G FS+ E ECLG C AP + N + +
Sbjct: 83 CKTITCKLRGSDELIKFTQDILGIKMGETSSDGLFSLGETECLGYCEKAPCMLCNLEQID 142
Query: 694 DLSVEDTKEIISKLKKD 744
L +I K++K+
Sbjct: 143 SLDENSITNLIEKIRKE 159
>UniRef50_Q835I9 Cluster: NAD-dependent formate dehydrogenase, gamma
subunit, putative; n=1; Enterococcus faecalis|Rep:
NAD-dependent formate dehydrogenase, gamma subunit,
putative - Enterococcus faecalis (Streptococcus
faecalis)
Length = 162
Score = 76.6 bits (180), Expect = 1e-12
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +1
Query: 352 LLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPC 531
L+ L G++ VAE L+L + VYE+ +FY + P KY +++C +TPC
Sbjct: 27 LIELQFASEEGYIDQETAQLVAEHLHLTEARVYEIVSFYAILKTEPQAKYVLKICNSTPC 86
Query: 532 WLRGSDAILNAIKQETNCEVGGNSPC--GKFSVSEVECLGACVNAPMIQVNDDYYEDLSV 705
G + + ET EV N P G F + C+GAC P+I++ D + L+
Sbjct: 87 HYTGGAMVAEVL--ETILEVPENQPTPDGLFMYHSIPCIGACDLGPVIKIKDTVFSQLTE 144
Query: 706 EDTKEIISKLKKD 744
E ++I L+ D
Sbjct: 145 EKIYQLIQHLQND 157
>UniRef50_Q1NQY7 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - delta proteobacterium
MLMS-1
Length = 200
Score = 76.6 bits (180), Expect = 1e-12
Identities = 49/157 (31%), Positives = 75/157 (47%)
Frame = +1
Query: 211 MSSLFVHRATPAANPXSPLSARRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXGGWL 390
M AT +AN P RP+++A R G++ G + L Q Q G++
Sbjct: 1 MEDFMPTNATASANKTEP--RWRPVETAMRRN------GYQAGGLIEALHAVQ-QSYGYI 51
Query: 391 PISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIK 570
AM ++A L LP VY V TFY F +P G++ VC T C+++G+ IL I
Sbjct: 52 DEEAMGRLATALTLPLSKVYGVVTFYHFFHLKPKGRHSCVVCLGTACYIKGAAEILGDIA 111
Query: 571 QETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
+ + G + G S+ C+GAC AP + ++D
Sbjct: 112 AAYHIKAGETTADGALSLLTARCVGACGQAPAVVLDD 148
>UniRef50_A7IL17 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Alphaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Xanthobacter
sp. (strain Py2)
Length = 176
Score = 76.6 bits (180), Expect = 1e-12
Identities = 42/132 (31%), Positives = 65/132 (49%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
H GA P+L Q G ++P A+ +AE LNL + VY V TFY F R G++ V
Sbjct: 33 HLEGATMPILHALQETFG-FVPDPAVPMIAESLNLSRAEVYGVLTFYHDFRREAPGRHVV 91
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
++C C G A+ ++++ ++G SP G+ ++ + CLG C AP V+
Sbjct: 92 KLCAAEACQSVGGKALAQYVEEKLGVDMGSTSPDGRVTLEPIYCLGLCACAPSALVDGQL 151
Query: 688 YEDLSVEDTKEI 723
L + EI
Sbjct: 152 VGRLDRDAIDEI 163
>UniRef50_A3ETZ6 Cluster: NADH ubiquinone oxidoreductase; n=1;
Leptospirillum sp. Group II UBA|Rep: NADH ubiquinone
oxidoreductase - Leptospirillum sp. Group II UBA
Length = 627
Score = 76.6 bits (180), Expect = 1e-12
Identities = 37/134 (27%), Positives = 63/134 (47%)
Frame = +1
Query: 340 AMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCT 519
A+ PLL + ++ + + ++++ L + + TFY F+ P GK V+VC
Sbjct: 29 AVLPLLHYYMEKKN-YISEADVSRISQLTGLSVSDILGIGTFYQHFVFHPTGKNSVRVCL 87
Query: 520 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDL 699
TTPC RG + + + +P G F++ +CLG C AP +NDD Y +
Sbjct: 88 TTPCLFRGGKKTFETLSKSLGIGLEETTPDGLFTLYPAQCLGQCSEAPSFSINDDVYVGI 147
Query: 700 SVEDTKEIISKLKK 741
E I+ + +K
Sbjct: 148 PPEKIPSILDEYRK 161
>UniRef50_Q8YYU5 Cluster: NADH dehydrogenase I chain E; n=4;
Bacteria|Rep: NADH dehydrogenase I chain E - Anabaena
sp. (strain PCC 7120)
Length = 164
Score = 75.8 bits (178), Expect = 2e-12
Identities = 41/114 (35%), Positives = 62/114 (54%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
+++ A+ +L AQ + G+L + +A L LP VY VATFY +F P G +
Sbjct: 29 YQQDALIEILHKAQ-ELFGYLENDLLLYIAHSLKLPPSRVYGVATFYHLFSLAPQGVHSC 87
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 669
VCT T C+++GS AIL +++ T G + G+ S+ CLGAC AP +
Sbjct: 88 VVCTGTACYVKGSSAILADLEKATRIHAGETTADGQLSLLTARCLGACGIAPAV 141
>UniRef50_Q2LS97 Cluster: NADH-quinone oxidoreductase chain F; n=2;
Syntrophus aciditrophicus SB|Rep: NADH-quinone
oxidoreductase chain F - Syntrophus aciditrophicus
(strain SB)
Length = 638
Score = 75.4 bits (177), Expect = 3e-12
Identities = 37/115 (32%), Positives = 60/115 (52%)
Frame = +1
Query: 403 MHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETN 582
++ VAE +NLP+ V FYTMF RP K+ ++VC + PC + G+ I + +++
Sbjct: 72 LNAVAEAMNLPQSTVAGFVGFYTMFSTRPRAKFLIRVCKSGPCHVMGARTIFDYVEKHLG 131
Query: 583 CEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDE 747
G + G F + ECLG C AP + +N D + +L+ E I+ + E
Sbjct: 132 ISPGQTTADGLFHLEACECLGICSVAPAMMINYDLHGNLTEERIATILDGYRSRE 186
>UniRef50_Q47WZ1 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 163
Score = 74.9 bits (176), Expect = 4e-12
Identities = 39/133 (29%), Positives = 71/133 (53%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
GAM P+L Q ++P +A+ +A+ LN+ K V+ V +FY F G + +++C
Sbjct: 24 GAMLPILHAIQNDLS-FIPSNALPLIAKALNVSKAEVHGVISFYHHFRTEEPGAHVIEIC 82
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C GS A+ IKQ + + S ++++ V CLG C +P +++ DD + +
Sbjct: 83 RGESCQAMGSRALEENIKQNLSIDYHQTSKDRQYTLEPVYCLGNCACSPAMRIGDDIHGE 142
Query: 697 LSVEDTKEIISKL 735
L ++ ++II+ L
Sbjct: 143 LDLQKFEQIIASL 155
>UniRef50_Q2C5T5 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Vibrionaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Photobacterium sp. SKA34
Length = 188
Score = 74.1 bits (174), Expect = 7e-12
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G++ +++ V+E +L + E+ TFYT+ RRP+G+ ++VC + C RG+ +L
Sbjct: 36 GYITKPSLNLVSELTDLSTTQLDELITFYTLLRRRPVGRNIMRVCDSISCHTRGAKKVLE 95
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYE-DLSVEDTKEIISKLK 738
A + T +G + G +V CLG C AP +NDD E +L+ E + I+++L
Sbjct: 96 AAENATGKALGEIANDGSITVLPSICLGLCDRAPAALINDDRVEGELTPERMRMILTELA 155
Query: 739 KDE 747
++E
Sbjct: 156 EEE 158
>UniRef50_Q01WJ0 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Solibacter usitatus
(strain Ellin6076)
Length = 170
Score = 73.7 bits (173), Expect = 9e-12
Identities = 39/121 (32%), Positives = 66/121 (54%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G+L + + VA L +P VY ATFY F +P G++ VCT T C+++G+ A+L
Sbjct: 46 GYLDEAGLRFVASVLRVPLSRVYGAATFYHFFTLKPKGRHTCVVCTGTACYIKGAPALLG 105
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKK 741
AI+++ + G + G+ SV CLG+C AP ++ L E++++++K
Sbjct: 106 AIEKQYGIKPGETTADGELSVLTARCLGSCGLAPAAVMDQAV---LGKIGPAEMLARIEK 162
Query: 742 D 744
D
Sbjct: 163 D 163
>UniRef50_A6PMG8 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=1; Victivallis vadensis ATCC
BAA-548|Rep: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor - Victivallis vadensis ATCC BAA-548
Length = 150
Score = 72.5 bits (170), Expect = 2e-11
Identities = 35/117 (29%), Positives = 59/117 (50%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G++ ++ ++E +P++ V V +FY F R GKY + +C T C ++GS +
Sbjct: 30 GYVSDESIRAISEYFGIPEVEVEGVLSFYAQFKRVKPGKYKIAICDGTACHIKGSPLVQE 89
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISK 732
+ + E G G FS+ V CLG C AP++ VN Y L + T +I+ +
Sbjct: 90 WVSRALGIEDGQTDERGHFSLETVACLGCCSLAPVMSVNGRVYGKLDRKSTIKILKE 146
>UniRef50_Q2FP98 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Methanospirillum hungatei JF-1|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 160
Score = 72.5 bits (170), Expect = 2e-11
Identities = 36/120 (30%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Frame = +1
Query: 388 LPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAI 567
+P+ + V+E L+LP ++ + TFY+ F +P+G++ + VC TPC ++G++ IL +
Sbjct: 34 IPMDTLKLVSEKLDLPLSELFALVTFYSFFSLKPVGEHLITVCMGTPCHVKGAEKILETL 93
Query: 568 KQETNC--EVGG-----NSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEII 726
++ EV +P KF+V C GAC AP++ V+ + + ++ E EI+
Sbjct: 94 EEHLGLSGEVQDGKYLQTTPDNKFTVEIARCFGACSMAPVLHVDGELHGYVTPERIPEIL 153
>UniRef50_Q749M0 Cluster: NAD-reducing hydrogenase, putative; n=4;
Bacteria|Rep: NAD-reducing hydrogenase, putative -
Geobacter sulfurreducens
Length = 191
Score = 72.1 bits (169), Expect = 3e-11
Identities = 39/119 (32%), Positives = 64/119 (53%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
++ A+ +L +AQ G L M VA L +P VY VATFY F G++
Sbjct: 34 YRADALLEVLHVAQETFG-CLSDELMTHVARQLRVPPSRVYGVATFYHFFTLEARGEHSC 92
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
VCT T C+++ S I+ ++ E + + G + GK ++S V CLG+C AP++ ++ +
Sbjct: 93 VVCTGTACYVKRSAEIVTRLENEFDVKAGKTTADGKLTLSTVRCLGSCGLAPIVVLDGE 151
>UniRef50_A1FMP2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=5; Pseudomonas|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Pseudomonas putida W619
Length = 160
Score = 72.1 bits (169), Expect = 3e-11
Identities = 38/136 (27%), Positives = 71/136 (52%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
GA+ P+L Q G ++P +A+ +A LNL V V +FY F P ++ +++C
Sbjct: 23 GALLPILHAVQESIG-FIPDAAVADIAHALNLSLAEVRGVISFYHDFRTAPPARHTLRLC 81
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C RGS+A+ ++++ + G S G S+ V CLGAC +P ++++ +
Sbjct: 82 RAESCQSRGSEALAAQLREQLALDDHGTSADGAISLRPVYCLGACACSPALELDGQVHAR 141
Query: 697 LSVEDTKEIISKLKKD 744
L+ E + +++ +D
Sbjct: 142 LTPERLRSLVNGCLED 157
>UniRef50_Q6N1Z1 Cluster: NADH-ubiquinone dehydrogenase chain E;
n=8; Alphaproteobacteria|Rep: NADH-ubiquinone
dehydrogenase chain E - Rhodopseudomonas palustris
Length = 162
Score = 71.7 bits (168), Expect = 4e-11
Identities = 35/120 (29%), Positives = 61/120 (50%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G + AM L L Q + GW+ + + + A+ L + + +ATFY+ R P+G
Sbjct: 19 GGAKAAMVEALKLVQ-EAEGWVSDAHLKEAADVLGVTPAEIDALATFYSQIFRSPVGDTV 77
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+ +C C+L G DA+ +A+ + G +P GKF++ + C+G C AP+ V +
Sbjct: 78 ILLCDGLSCYLCGGDAVRDAVMSKLGIGFGETTPDGKFTLINICCVGGCDRAPVALVGPE 137
>UniRef50_Q608U6 Cluster: Formate dehydrogenase, gamma subunit; n=3;
Proteobacteria|Rep: Formate dehydrogenase, gamma subunit
- Methylococcus capsulatus
Length = 159
Score = 71.3 bits (167), Expect = 5e-11
Identities = 38/135 (28%), Positives = 69/135 (51%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
GA+ P+L Q + G ++P A+ ++A+ LNL + V+ V +FY F GK+ + +C
Sbjct: 23 GALLPILHGIQDRIG-FIPEDAVPQIAKALNLSRAEVHGVISFYHYFRTTAPGKHTIHLC 81
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C S+++ +K + + G FS+ V CLG C +P + ++ + Y
Sbjct: 82 RAESCQAMNSESLETHVKARLGIDYHETTADGAFSLEPVYCLGNCACSPSMMIDHEVYGH 141
Query: 697 LSVEDTKEIISKLKK 741
+S + II +LK+
Sbjct: 142 VSPQSFDAIIDELKE 156
>UniRef50_Q5BT40 Cluster: SJCHGC02806 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02806 protein - Schistosoma
japonicum (Blood fluke)
Length = 82
Score = 71.3 bits (167), Expect = 5e-11
Identities = 30/50 (60%), Positives = 39/50 (78%)
Frame = +1
Query: 541 GSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
GS+AILN +K+ E G +P F+++EVECLGACVNAPM+Q+NDDYY
Sbjct: 6 GSEAILNTLKKTLGIEPGQTTPDKMFTLTEVECLGACVNAPMLQINDDYY 55
>UniRef50_Q98BW7 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=15; Proteobacteria|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Rhizobium loti
(Mesorhizobium loti)
Length = 159
Score = 69.3 bits (162), Expect = 2e-10
Identities = 39/134 (29%), Positives = 68/134 (50%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
G + P+L Q + G +P +A+ +A+ LNL + V+ V TFY F RP G++ +++C
Sbjct: 26 GPLLPILHEIQDEFGH-VPQAALPVIADGLNLSRAEVHGVVTFYHDFRARPAGRHVLKLC 84
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C GSDA+ IKQ + G ++ V CLG C +P ++ +
Sbjct: 85 QAEACQSMGSDAVAAKIKQLLGIGFHETTRDGSVTLEPVYCLGLCACSPSAMLDGEVIGR 144
Query: 697 LSVEDTKEIISKLK 738
L + EI+++++
Sbjct: 145 LDDDKIDEILAEVR 158
>UniRef50_Q0PQQ4 Cluster: NADH dehydrogenase I E subunit; n=1;
Endoriftia persephone 'Hot96_1+Hot96_2'|Rep: NADH
dehydrogenase I E subunit - Endoriftia persephone
'Hot96_1+Hot96_2'
Length = 123
Score = 69.3 bits (162), Expect = 2e-10
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
++ A+ L + Q GGWL + M VA L++ + VYEVATFY+M+ +P+GK+ +
Sbjct: 33 RQSAVMAALRIVQDANGGWLTTALMDDVAAYLDMAPIAVYEVATFYSMYELKPVGKHKIC 92
Query: 511 VCTTTPCWLRGSDAILNAIKQ 573
+CT C + SD I+ +++
Sbjct: 93 ICTNVSCMINNSDRIVEHLEK 113
>UniRef50_Q483I3 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Colwellia psychrerythraea 34H|Rep: Formate
dehydrogenase, gamma subunit - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 168
Score = 68.5 bits (160), Expect = 3e-10
Identities = 39/133 (29%), Positives = 66/133 (49%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
GA+ P+L Q ++P A+ VA+ L + +Y V TFY F G++ +++C
Sbjct: 26 GALLPILHDIQHHFD-YIPKKAIAIVAQGLQQTEAEIYGVITFYAHFQLNKPGRHIIEIC 84
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C GS A+ AIK + + G + F++ V CLG C +P I+V D+ Y
Sbjct: 85 RGEACQAMGSKALEKAIKSQLAVDFGQTTVDKNFTLEPVYCLGNCACSPSIKVADNVYGR 144
Query: 697 LSVEDTKEIISKL 735
++ E ++ +L
Sbjct: 145 MNSEKFAKLSEQL 157
>UniRef50_A3YBB2 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Marinomonas sp. MED121|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Marinomonas
sp. MED121
Length = 189
Score = 68.5 bits (160), Expect = 3e-10
Identities = 37/134 (27%), Positives = 66/134 (49%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
G + P+L Q Q G ++P S++ + + LN+ + V+ V TFY F +P G++ ++VC
Sbjct: 43 GPLLPILHEVQHQLG-YVPDSSLPIIGKALNISRAEVHGVVTFYHHFSSKPRGRHIIEVC 101
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C G + K + + + ++ V CLG C +P I+V D+ Y
Sbjct: 102 RAESCQSMGGRDLEAHAKSALGLDWYQTTMDKEITLEPVFCLGNCACSPAIRVGDEVYGR 161
Query: 697 LSVEDTKEIISKLK 738
+ E EI+ +L+
Sbjct: 162 MDAEQFDEIVDELR 175
>UniRef50_A3JB74 Cluster: ATP synthase subunit E; n=1; Marinobacter
sp. ELB17|Rep: ATP synthase subunit E - Marinobacter sp.
ELB17
Length = 178
Score = 68.1 bits (159), Expect = 4e-10
Identities = 37/136 (27%), Positives = 67/136 (49%)
Frame = +1
Query: 328 HKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHV 507
HK GA+ P+L Q + G ++P A+ +AE L + ++ V +FY F P G +
Sbjct: 36 HKPGALLPILHAIQDRVG-YVPEDAVPIIAEMLQQTRADIHGVISFYHHFRTHPSGSNLL 94
Query: 508 QVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY 687
+VC C RG A+ +++ + + +F++ V CLG C P I+VN+D
Sbjct: 95 EVCRAEACQARGGRALERHVQERLSVGYHDTTADNEFTLVPVYCLGNCACGPSIRVNNDI 154
Query: 688 YEDLSVEDTKEIISKL 735
++ + +++ L
Sbjct: 155 IGRVTPQKFDQLVDAL 170
>UniRef50_A1AP34 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit precursor; n=2; Bacteria|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit precursor - Pelobacter
propionicus (strain DSM 2379)
Length = 169
Score = 68.1 bits (159), Expect = 4e-10
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
+LP+ + V E L++P V+ V +FY F P GKY +++C T C + S IL A
Sbjct: 45 YLPMEVLSHVIEELDIPATKVFGVVSFYAHFTLEPRGKYVIRLCDGTACHAKRSIPILEA 104
Query: 565 IKQETNCEVGG-NSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 735
+ + +P F+V V CLGAC AP++ +N++ Y ++ +I ++
Sbjct: 105 LYAKLGLSSKKVTTPDMLFTVETVTCLGACGLAPVMLINEEVYGRVTPASAVALIDEI 162
>UniRef50_A0QNT7 Cluster: Formate dehydrogenase, gamma subunit; n=1;
Mycobacterium smegmatis str. MC2 155|Rep: Formate
dehydrogenase, gamma subunit - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 161
Score = 68.1 bits (159), Expect = 4e-10
Identities = 37/119 (31%), Positives = 58/119 (48%)
Frame = +1
Query: 334 RGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQV 513
RG + P+L Q + G +P A+ +AE LNL + V+ V TFY F P G+ V+V
Sbjct: 26 RGPLLPILHAVQERLG-CVPAEAVPVLAEELNLSRADVHGVITFYHDFRSEPAGRTTVRV 84
Query: 514 CTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
C C G+ ++ ++ ++G + G + +V CLG C P QV+ Y
Sbjct: 85 CRAEACQALGASRLVAHLQDRHGVQLGDATDDGTLTAEQVFCLGNCALGPSAQVDGRLY 143
>UniRef50_UPI0000E87F9D Cluster: ATP synthase subunit E; n=1;
Methylophilales bacterium HTCC2181|Rep: ATP synthase
subunit E - Methylophilales bacterium HTCC2181
Length = 157
Score = 66.9 bits (156), Expect = 1e-09
Identities = 40/137 (29%), Positives = 63/137 (45%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K GA+ PL+ Q G ++P + ++ NL ++ TFY F P GK +Q
Sbjct: 21 KPGALLPLMHAIQDSLG-YIPEDSYPIISSAYNLSIAEIHGFVTFYHHFRTSPSGKNILQ 79
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC C GS++I N K+ + S G ++ V CLG C +P + +ND
Sbjct: 80 VCRAESCQSMGSESIENYCKKVLGVDYHETSKDGVITLEPVYCLGNCACSPSVMMNDKVI 139
Query: 691 EDLSVEDTKEIISKLKK 741
++ E II +K+
Sbjct: 140 GRVTPEKIDNIIKAVKQ 156
>UniRef50_A3Z0U6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Synechococcus sp. WH 5701|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit -
Synechococcus sp. WH 5701
Length = 168
Score = 66.9 bits (156), Expect = 1e-09
Identities = 36/113 (31%), Positives = 62/113 (54%)
Frame = +1
Query: 340 AMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCT 519
A+ +L AQ+ +L + VA L LP V A+FY +F +P ++ VCT
Sbjct: 36 ALIEVLHGAQKLYS-YLSDDLLRHVATRLQLPLSRVKGTASFYHLFRFQPPARHRCVVCT 94
Query: 520 TTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 678
T C ++G+ A++ A+++ ++G G S+SEV CLG C +AP++ ++
Sbjct: 95 GTACQIQGAPALIAAMEEGLGLKLGARRGDGWASLSEVRCLGTCSDAPLVLID 147
>UniRef50_Q057X2 Cluster: NADH dehydrogenase I chain E; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep: NADH
dehydrogenase I chain E - Buchnera aphidicola subsp.
Cinara cedri
Length = 156
Score = 63.3 bits (147), Expect = 1e-08
Identities = 30/118 (25%), Positives = 59/118 (50%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
W+ ++ +++ L++P V +ATFY R+P+G+ ++ C + C++ +I
Sbjct: 39 WICKDSIIAISKILSIPACEVESIATFYCHIFRKPVGRNIIRYCDSVVCFINNFKSIKKK 98
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 738
+K N G + ++++ CLGAC P++ VN Y L+ + I+ K K
Sbjct: 99 LKYILNISPGETTSDCRYTLLPTCCLGACDKGPVMLVNKTLYTRLTSKMLINILDKYK 156
>UniRef50_A5V6C3 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=2; Sphingomonadaceae|Rep: NADH dehydrogenase
(Ubiquinone), 24 kDa subunit - Sphingomonas wittichii
RW1
Length = 159
Score = 63.3 bits (147), Expect = 1e-08
Identities = 36/113 (31%), Positives = 55/113 (48%)
Frame = +1
Query: 325 GHKRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYH 504
G +RGA+ PLL Q + G ++ + VA +NL + V+ V +FY F + P G++
Sbjct: 21 GERRGALLPLLHDLQEELG-FVGEETVAAVAAAMNLSRAEVHGVVSFYHDFRKAPAGRHV 79
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 663
V+ C C RG AI A+ +G G+ ++ V CLG C P
Sbjct: 80 VKYCRAESCRSRGGVAIEAALADRLRVTMGETRADGQVTLEPVYCLGLCAIGP 132
>UniRef50_Q89QJ0 Cluster: NADH dehydrogenase I chain E; n=16;
Alphaproteobacteria|Rep: NADH dehydrogenase I chain E -
Bradyrhizobium japonicum
Length = 162
Score = 62.5 bits (145), Expect = 2e-08
Identities = 32/111 (28%), Positives = 55/111 (49%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
+ GA +L Q G ++P +A+ VA+ LNL + V+ V TFY F +P G++ ++
Sbjct: 27 QEGATLVILHALQAAFG-YVPEAAIPMVAQALNLSRAEVHGVFTFYHDFRHKPAGRHVLK 85
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 663
+C C G DA+ + +G + + ++ + CLG C AP
Sbjct: 86 LCRAEACQAAGGDALAARAEARLGVSLGNTTADDRVTLEPIYCLGLCATAP 136
>UniRef50_A6VXL9 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=3; Gammaproteobacteria|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Marinomonas
sp. MWYL1
Length = 165
Score = 62.5 bits (145), Expect = 2e-08
Identities = 37/138 (26%), Positives = 65/138 (47%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K GA+ PLL Q + ++P A+ +A L L + V+ V +FY F + G++ V+
Sbjct: 24 KPGALLPLLHAIQDRFS-YIPEDAVALIAGALKLSRAEVHGVISFYHHFRTKQPGRHVVE 82
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYY 690
VC C G+ + K + + + ++ V CLG C P ++V D+ Y
Sbjct: 83 VCRAEACQAVGARHLEAYAKSILDVQYHQTTADNNITLEPVYCLGNCSCGPSVRVGDEIY 142
Query: 691 EDLSVEDTKEIISKLKKD 744
++ + E+I LK +
Sbjct: 143 AEVDTQRFDELIESLKTE 160
>UniRef50_A4XP94 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Pseudomonas mendocina ymp|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Pseudomonas
mendocina ymp
Length = 164
Score = 60.5 bits (140), Expect = 9e-08
Identities = 34/132 (25%), Positives = 62/132 (46%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
GA+ P+L Q + G +P + +AE L L + V+ V +FY F P G+ +++C
Sbjct: 29 GALLPILHDIQDRLGA-VPPELLPLIAEDLCLSRAEVHGVVSFYHDFRATPPGRQVLKLC 87
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYED 696
C G A+ ++ + +G G S V CLG C AP + +N + +
Sbjct: 88 QAEACQSMGVKALTAELESKLGLPLGETREDGSLSFEPVYCLGNCACAPSVMLNGELHGR 147
Query: 697 LSVEDTKEIISK 732
+ E+ ++++
Sbjct: 148 VDAEEVLALLAE 159
>UniRef50_Q63RZ3 Cluster: NAD-dependent formate dehydrogenase gamma
subunit; n=28; Burkholderia|Rep: NAD-dependent formate
dehydrogenase gamma subunit - Burkholderia pseudomallei
(Pseudomonas pseudomallei)
Length = 171
Score = 59.7 bits (138), Expect = 2e-07
Identities = 28/113 (24%), Positives = 55/113 (48%)
Frame = +1
Query: 364 AQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRG 543
A + G++P + + +A+ LNL + V+ V T+Y F P +++C C G
Sbjct: 42 AIQDDAGYVPPACVEPLAKALNLSRAEVHGVLTYYHHFRTAPPAHVTIRLCRAEACRSMG 101
Query: 544 SDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 702
+A++ + C + G + ++ V CLG C +P + +ND+ + +S
Sbjct: 102 GEALVAHAQARAGCRIDGGHG-DRVALESVYCLGLCAQSPSLTINDEPHAKMS 153
>UniRef50_Q28P85 Cluster: NADH dehydrogenase (Ubiquinone) 24 kDa
subunit; n=1; Jannaschia sp. CCS1|Rep: NADH
dehydrogenase (Ubiquinone) 24 kDa subunit - Jannaschia
sp. (strain CCS1)
Length = 167
Score = 59.3 bits (137), Expect = 2e-07
Identities = 31/114 (27%), Positives = 56/114 (49%)
Frame = +1
Query: 337 GAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVC 516
G + P+L Q G ++P A +A LN+ + ++ V +FY F R+P GK +++C
Sbjct: 29 GPLLPILHDVQAAFG-YVPDDARALIATALNITEAELHGVISFYHDFRRKPAGKRVLKIC 87
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 678
C G++A+ +A+ + G + G +V + CLG C P ++
Sbjct: 88 RAEACQAMGANAMSDAVLAQLGLGWGETAADGGLTVEPIYCLGLCACGPAAMID 141
>UniRef50_Q8NK93 Cluster: NADH-ubiquinone oxidoreductase 24kDa
subunit; n=1; Phanerochaete chrysosporium|Rep:
NADH-ubiquinone oxidoreductase 24kDa subunit -
Phanerochaete chrysosporium (White-rot fungus)
(Sporotrichumpruinosum)
Length = 56
Score = 59.3 bits (137), Expect = 2e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 694 DLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTGXG 837
DL+ E TK+++ KK EKPKPGP+SGR SE GLT+LT E G G
Sbjct: 1 DLTPETTKKVLDAFKKGEKPKPGPQSGRHTSENSAGLTALTSEPYGPG 48
>UniRef50_A0NMW4 Cluster: NADH:ubiquinone oxidoreductase,
NADH-binding (51 kD) subunit; n=2; Proteobacteria|Rep:
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD)
subunit - Stappia aggregata IAM 12614
Length = 626
Score = 58.0 bits (134), Expect = 5e-07
Identities = 33/120 (27%), Positives = 51/120 (42%)
Frame = +1
Query: 397 SAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 576
+ M +A L ++ V VA+FY+ P G+ +++C G + A + E
Sbjct: 57 ATMDHIAAATGLTRIEVEGVASFYSFLSLTPKGRVTIRLCDDIVDRFSGLSEVACAFEDE 116
Query: 577 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPK 756
+VG S G FS+ C+G C AP VND L+ E + LK P+
Sbjct: 117 LGLKVGETSNDGAFSLEYTPCIGMCDQAPAAMVNDIVLTKLTPETARSAAQALKAGRSPE 176
>UniRef50_Q47HE6 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit; n=1; Dechloromonas aromatica RCB|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa
subunit:Respiratory-chain NADH dehydrogenase domain, 51
kDa subunit - Dechloromonas aromatica (strain RCB)
Length = 632
Score = 55.2 bits (127), Expect = 3e-06
Identities = 32/118 (27%), Positives = 52/118 (44%)
Frame = +1
Query: 385 WLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNA 564
W+ A+ ++ L +P+ + VA FY F P GKY V + GS A+++
Sbjct: 42 WISPEAIDRMQVTLGVPRTKIEGVAGFYAFFYTEPRGKYRVLFSDNITDRMLGSKAMMDR 101
Query: 565 IKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 738
+ E G S G SV++ C G C P + +N+ L+ E EI ++
Sbjct: 102 LCNSLWVERGKVSEDGLVSVAQTACTGMCDQGPALLINNYAIAGLTAERIDEIAELIR 159
>UniRef50_Q9ZBV8 Cluster: Putative respiratory chain oxidoreductase;
n=2; Streptomyces|Rep: Putative respiratory chain
oxidoreductase - Streptomyces coelicolor
Length = 646
Score = 54.0 bits (124), Expect = 8e-06
Identities = 48/172 (27%), Positives = 67/172 (38%), Gaps = 1/172 (0%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
+R + P L A GW+ A+ V L +P Y VATFY MF RP +
Sbjct: 34 RRDQLLPALH-ALNDRVGWISEGALDYVCRRLTVPPAEAYGVATFYAMFSVRPRPATVLH 92
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP-MIQVNDDY 687
VCT C G+ + A++ E G + CLG C AP + +
Sbjct: 93 VCTDLACTAAGASRLCAAVESRLGPESG-------VKLERSPCLGLCERAPATLVIRAGE 145
Query: 688 YEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSLTEEXTGXGFG 843
+ EDT +DE + SG A GG + +E +G G G
Sbjct: 146 SARPAQEDTP--ARPAFEDEAVQAEGGSGGAAPGDGGGTSRSSEAESGGGKG 195
>UniRef50_O13691 Cluster: Probable NADH-ubiquinone oxidoreductase 24
kDa subunit, mitochondrial precursor; n=1;
Schizosaccharomyces pombe|Rep: Probable NADH-ubiquinone
oxidoreductase 24 kDa subunit, mitochondrial precursor -
Schizosaccharomyces pombe (Fission yeast)
Length = 162
Score = 53.6 bits (123), Expect = 1e-05
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Frame = +1
Query: 340 AMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFY-TMFIRRPIGKYHVQVC 516
A+ PLL LAQRQ G W+P +AM+++A + V+ + Y F RP K V++C
Sbjct: 30 ALVPLLDLAQRQHGTWIPPTAMYEIASLAGVSIDYVHSLILAYPNDFFWRP-KKPRVRIC 88
Query: 517 TTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK--FSVSEVECLGACVNAPMIQVNDDYY 690
+ C + + +N + S K F V CLG C P + +ND Y
Sbjct: 89 NSWMCQQAAEE------QGNSNWDSQCRSVATKYGFDVENTGCLGNCFQGPAMWINDKIY 142
Query: 691 EDLSVEDTKEIISKL 735
+ E +I+ L
Sbjct: 143 GVNTKEKLVDIMEAL 157
>UniRef50_Q0AL75 Cluster: NADH dehydrogenase (Ubiquinone), 24 kDa
subunit; n=1; Maricaulis maris MCS10|Rep: NADH
dehydrogenase (Ubiquinone), 24 kDa subunit - Maricaulis
maris (strain MCS10)
Length = 163
Score = 52.0 bits (119), Expect = 3e-05
Identities = 30/118 (25%), Positives = 57/118 (48%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G + +A+ +A+ LNL + V V +FY F R+P ++ ++C C G++A+
Sbjct: 39 GHISDAAIATIADALNLSRAEVLGVVSFYHDFRRQPGARHTFKLCRAEACQAAGAEAVAA 98
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKL 735
AI+ + + P +F + V CLG C P +++ L+ E +++L
Sbjct: 99 AIEDQLEALSTTDHP-PEFELKSVYCLGNCALGPAAMLDERPLGRLTAERALAALTRL 155
>UniRef50_A0K164 Cluster: NADH dehydrogenase; n=2;
Actinomycetales|Rep: NADH dehydrogenase - Arthrobacter
sp. (strain FB24)
Length = 566
Score = 52.0 bits (119), Expect = 3e-05
Identities = 30/91 (32%), Positives = 40/91 (43%)
Frame = +1
Query: 412 VAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQETNCEV 591
VA L LP V A+F+ F P G HV+VC+ C+ A + ++
Sbjct: 53 VARTLGLPAAAVEGPASFFADF-SAPRGARHVRVCSAAACFAATGGAHVPEVEAALGVPS 111
Query: 592 GGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
G SP G S+ V CLG C P V D+
Sbjct: 112 GSKSPDGTVSLQAVRCLGYCFAGPAALVGDE 142
>UniRef50_A0Z690 Cluster: Formate dehydrogenase subunit gamma; n=1;
marine gamma proteobacterium HTCC2080|Rep: Formate
dehydrogenase subunit gamma - marine gamma
proteobacterium HTCC2080
Length = 165
Score = 46.4 bits (105), Expect = 0.002
Identities = 31/116 (26%), Positives = 50/116 (43%)
Frame = +1
Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
G++P A+ VAE N+ + + V ++Y+ + P V++C C G A+
Sbjct: 42 GYVPEGAVAVVAEVCNVTRADAHGVFSYYSDLRKTPPPLISVRLCAAEACQAVGGRALAA 101
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS 729
A + C N + V CLG C P VND ++SVE K ++
Sbjct: 102 AWGEA--CAADPNLAGATGTDEPVFCLGNCALGPAALVNDQLIGNVSVEALKSAVA 155
>UniRef50_Q603S6 Cluster: NAD-reducing hydrogenase, alpha subunit;
n=9; Proteobacteria|Rep: NAD-reducing hydrogenase, alpha
subunit - Methylococcus capsulatus
Length = 610
Score = 46.0 bits (104), Expect = 0.002
Identities = 30/118 (25%), Positives = 51/118 (43%)
Frame = +1
Query: 400 AMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAIKQET 579
A KVAE L + V V FY+ P+GK+ +++ + + GS + + ++
Sbjct: 43 AQQKVAESLGVCITQVRAVVDFYSFLSTVPLGKFDIRISDSITDHMLGSREVAAGLCRKL 102
Query: 580 NCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKP 753
+ G G+ +S C G C P +N Y ED + I++L D+ P
Sbjct: 103 GIQPGEPRQDGRVGLSFTSCTGLCDQGPAGLIN-GYAIPRLTEDRTDQIARLINDDIP 159
>UniRef50_A6GJI0 Cluster: Putative NADH dehydrogenase I chain F;
n=1; Plesiocystis pacifica SIR-1|Rep: Putative NADH
dehydrogenase I chain F - Plesiocystis pacifica SIR-1
Length = 503
Score = 45.2 bits (102), Expect = 0.004
Identities = 33/111 (29%), Positives = 50/111 (45%)
Frame = +1
Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQ 510
K+GA ++ + GG P KV+E +P+ VY VA+FYT+ + RP K +
Sbjct: 3 KKGAKRKVVLQLLEEHGGMRP-GVARKVSEETGVPEADVYGVASFYTL-LSRPGAK--TR 58
Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAP 663
VC C + G++ ++ +K V V CLG C AP
Sbjct: 59 VCQGLTCVMAGAEQVIAELKARGE------------EVEAVSCLGQCDRAP 97
>UniRef50_Q5P4U3 Cluster: Formate dehydrogenase, NAD(P) reducing,
beta subunit; n=41; Proteobacteria|Rep: Formate
dehydrogenase, NAD(P) reducing, beta subunit - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 585
Score = 43.2 bits (97), Expect = 0.015
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Frame = +1
Query: 274 RRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXG-GWLPISAMHKVAEXLNLPKMXVY 450
R P+ ++ RL L G A + L + Q G L + +AE + L + V+
Sbjct: 32 REPLPASARLAASAALAGETPRADRLIEYLHRLQDEHGALHADHLAALAEAMKLARAEVF 91
Query: 451 EVATFYTMFIRRPIG-----KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGK 615
EVATFY F P G V+VC + C + G + ++ + EV
Sbjct: 92 EVATFYHHFDFVPAGGKAPPALTVRVCESLGCAMAGGAELAASLASQLGAEV-------- 143
Query: 616 FSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKPKPGPRSGRF 780
V V C+G C +AP+ V + D + + + E+ +P P + RF
Sbjct: 144 -RVQRVPCVGRCDSAPVAVVGQ---RPVLHADADRVAAVVAGGERDEPLPEAIRF 194
>UniRef50_Q2AG56 Cluster: NADH dehydrogenase I chain G; n=1;
Halothermothrix orenii H 168|Rep: NADH dehydrogenase I
chain G - Halothermothrix orenii H 168
Length = 80
Score = 43.2 bits (97), Expect = 0.015
Identities = 24/80 (30%), Positives = 39/80 (48%)
Frame = +1
Query: 496 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 675
K V+VC T C L GS AI++ +K + + K + V C+ +C P + V
Sbjct: 4 KITVEVCVGTSCHLMGSPAIIDYLKNLPD------NIKDKIEIKHVSCMNSCDRGPRVMV 57
Query: 676 NDDYYEDLSVEDTKEIISKL 735
ND + + E KE I+++
Sbjct: 58 NDTVIYNATPERVKEAITEI 77
>UniRef50_A1WBG0 Cluster: NADH dehydrogenase (Quinone) precursor;
n=6; Proteobacteria|Rep: NADH dehydrogenase (Quinone)
precursor - Acidovorax sp. (strain JS42)
Length = 640
Score = 42.7 bits (96), Expect = 0.019
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 412 VAEXLNLPKMXVYEVATFYTMF--IR---RPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 576
+A +NLP VYEVA+FY F +R + V+VC + C + G+ +L A+
Sbjct: 84 LARQMNLPMAQVYEVASFYHHFEIVRGHDAQAPRLVVRVCDSLSCTMAGARELLEAL--P 141
Query: 577 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIIS 729
+ G G V V C+G C AP+ V+ +V+ E ++
Sbjct: 142 ARLQAAGQ---GDVQVVAVPCVGRCEQAPVAVVHQCPVPHAAVDAVLETVN 189
>UniRef50_Q1VMJ2 Cluster: Formate dehydrogenase, beta subunit; n=1;
Psychroflexus torquis ATCC 700755|Rep: Formate
dehydrogenase, beta subunit - Psychroflexus torquis ATCC
700755
Length = 243
Score = 41.9 bits (94), Expect = 0.034
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +1
Query: 412 VAEXLNLPKMXVYEVATFYTMFI-----RRPIGKYHVQVCTTTPCWLRGSDAILNAIKQE 576
+A +NLP ++EVA+FY F + P +++CT+ C L S+ IL I
Sbjct: 67 LAFLMNLPLSEIWEVASFYDHFTLVKDSQNPPPTRTIRICTSVTCSLFNSEKILETIAPN 126
Query: 577 TNCEVGGNSPCGKFSVSEVECLGACVNAPM 666
N ++ +F S CLGAC AP+
Sbjct: 127 DNTKI-------RFIAS--PCLGACDKAPV 147
>UniRef50_Q5UYB6 Cluster: Colbalt chelase thioredoxin; n=6;
Halobacteriaceae|Rep: Colbalt chelase thioredoxin -
Haloarcula marismortui (Halobacterium marismortui)
Length = 407
Score = 41.9 bits (94), Expect = 0.034
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 502 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
HV VCT C G+ A+L ++Q + C ++ CLG C PM+ V
Sbjct: 318 HVAVCTNQTCAQDGAPAVLERLRQAAR----DSDQCDA-RITRSSCLGRCGEGPMVAVYP 372
Query: 682 D--YYEDLSVEDTKEIIS 729
D +Y + ED EI+S
Sbjct: 373 DGVWYGGVEDEDAAEIVS 390
>UniRef50_Q04NF7 Cluster: Ferredoxin related-protein; n=4;
Leptospira|Rep: Ferredoxin related-protein - Leptospira
borgpetersenii serovar Hardjo-bovis (strain JB197)
Length = 397
Score = 41.5 bits (93), Expect = 0.044
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 502 HVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVND 681
HV +C +T C +GS ++++ I+ +C + + F VS+ CLG C P + V
Sbjct: 306 HVYICESTNCASKGSISLIHRIR---SC-IKKHGKQTDFRVSKSSCLGRCGEGPTLVVYP 361
Query: 682 D--YYEDLSVEDTKEIISK 732
D +Y+ ++ D +EI+++
Sbjct: 362 DGIWYQRVNENDAEEIVTE 380
>UniRef50_A1SU84 Cluster: Hydrogenase, NADP-reducing subunit C; n=1;
Psychromonas ingrahamii 37|Rep: Hydrogenase,
NADP-reducing subunit C - Psychromonas ingrahamii
(strain 37)
Length = 588
Score = 39.1 bits (87), Expect = 0.24
Identities = 23/117 (19%), Positives = 51/117 (43%)
Frame = +1
Query: 388 LPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILNAI 567
+P A+ ++A L++ + + FY P G Y + + + + G + I N +
Sbjct: 37 IPQQAIQQLATTLSISIPKIRALIEFYHFLHYHPRGDYDIYISDSIIDHMSGKNEISNYL 96
Query: 568 KQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLK 738
++ N ++ G+ +VS C G P +N L+ + +I++K++
Sbjct: 97 CEKLNVKLNQPRADGRVTVSNTSCTGMSDQGPAALINGLALTRLTRKKVDQIVTKIE 153
>UniRef50_A5KR35 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 160
Score = 38.7 bits (86), Expect = 0.31
Identities = 18/82 (21%), Positives = 38/82 (46%)
Frame = +1
Query: 499 YHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVN 678
+ + CT C + IL +++E + G S G+F + CL C +P + ++
Sbjct: 78 HEIIACTGERCGKKDGMTILQNLRRELGIKKDGISSDGRFELRTRNCLKQCRTSPNMYID 137
Query: 679 DDYYEDLSVEDTKEIISKLKKD 744
Y ++D K +++ + K+
Sbjct: 138 RKLYSGEQLKDIKTLLNNICKE 159
>UniRef50_Q8KX55 Cluster: Ferredoxin PetF2; n=1; Synechococcus sp.
PCC 7002|Rep: Ferredoxin PetF2 - Synechococcus sp.
(strain PCC 7002) (Agmenellum quadruplicatum)
Length = 124
Score = 36.3 bits (80), Expect = 1.7
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Frame = +1
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
V +C C +GS AIL A + + +V V + C G C N P+++V D
Sbjct: 5 VLICCHHTCPKQGSTAILAAFQAQAPADV---------EVRQAGCFGECGNGPLVRVLPD 55
Query: 685 --YYEDLSVEDTKEIISKLKKDEKPKPGPRSGRFASEPLGGLTSL 813
+Y + D I+ + + +P G+F G + +L
Sbjct: 56 EVWYAHVQQADIPAIVKQHLRQNRPVKQKLYGKFHQPNHGAIAAL 100
>UniRef50_A6PNR9 Cluster: Putative uncharacterized protein
precursor; n=1; Victivallis vadensis ATCC BAA-548|Rep:
Putative uncharacterized protein precursor - Victivallis
vadensis ATCC BAA-548
Length = 540
Score = 36.3 bits (80), Expect = 1.7
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 523 TPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLS 702
+P +R A LNA TN G ++ F++ ++ A +N Q+NDDY S
Sbjct: 349 SPVLIRQLGAALNAGNPVTNAVPGDDAAYVGFTLEQIAARPAMLNEVAKQLNDDYVAAES 408
Query: 703 VEDTKEII-SKLKKDEKPKPGPRSGRFAS 786
++ +E ++L + + KP R+ FA+
Sbjct: 409 LKLAREAAKAELDRIKALKPAERAKAFAA 437
>UniRef50_Q2AG82 Cluster: Ferredoxin:4Fe-4S ferredoxin, iron-sulfur
binding:Iron hydrogenase, small subunit:Hydrogenase
large subunit, C-terminal; n=14; Bacteria|Rep:
Ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding:Iron
hydrogenase, small subunit:Hydrogenase large subunit,
C-terminal - Halothermothrix orenii H 168
Length = 666
Score = 35.9 bits (79), Expect = 2.2
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
VQVC T C+L GS +L + + E G S K + C C NAP ++V +
Sbjct: 591 VQVCVGTCCYLHGSYDLLQGLIERV--EEEGLS--DKVDIEATFCFENCKNAPSVKVGNQ 646
Query: 685 YYEDLSVEDTKEIISKLK 738
VE +I+ LK
Sbjct: 647 LLS--KVESVDDILKHLK 662
>UniRef50_A7HJV1 Cluster: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein; n=1; Fervidobacterium nodosum
Rt17-B1|Rep: NADH:ubiquinone oxidoreductase 24 kD
subunit-like protein - Fervidobacterium nodosum Rt17-B1
Length = 96
Score = 35.9 bits (79), Expect = 2.2
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +1
Query: 496 KYHVQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQV 675
K+ V +C + C L+GS +I +K+ NS K S+ CLG CVN I +
Sbjct: 11 KFVVSICFGSSCHLKGSYSIAERLKEFIEKNKLENSVELKGSL----CLGMCVNGVNILI 66
Query: 676 NDDYYEDLSVEDTKEIISKLK 738
+D +++ E+ + + L+
Sbjct: 67 DDKLLSNINCENIEVVYEYLR 87
>UniRef50_A2Y635 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 368
Score = 35.5 bits (78), Expect = 2.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY--YEDLSVEDTKEIISKL 735
A+K EV G+ P G F + + + P I +ND Y +E ED +E+ +L
Sbjct: 229 AVKSSETSEVKGSLPEGFFDNKDADLRARGIQPPKIDINDAYKEFEKEIQEDLQEVDDRL 288
Query: 736 KKDE 747
+++E
Sbjct: 289 EEEE 292
>UniRef50_A0UUV1 Cluster: Putative uncharacterized protein; n=1;
Clostridium cellulolyticum H10|Rep: Putative
uncharacterized protein - Clostridium cellulolyticum H10
Length = 86
Score = 35.1 bits (77), Expect = 3.9
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = +1
Query: 505 VQVCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDD 684
+ VC + C L+GS I+N ++ + N+ K + C+G C +++ D
Sbjct: 4 IYVCVGSSCHLKGSYQIINCFQR----MIKENNLESKAELKASFCMGHCTTGVCVKIGDT 59
Query: 685 YYEDLSVEDTKEIISK 732
+Y D+ V + + ++
Sbjct: 60 FYGDVGVINAESFFTE 75
>UniRef50_A5ALP4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 100
Score = 34.7 bits (76), Expect = 5.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 685 YYEDLSVEDTKEIISKLKKDEKPKPGPR 768
Y +SVE+ KE + K K DEKPKP P+
Sbjct: 45 YATXVSVEEVKEKVDKGKGDEKPKPDPK 72
>UniRef50_Q60C55 Cluster: Ferredoxin, 2Fe-2S; n=4;
Proteobacteria|Rep: Ferredoxin, 2Fe-2S - Methylococcus
capsulatus
Length = 108
Score = 34.3 bits (75), Expect = 6.7
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Frame = +1
Query: 502 HVQVCTTT--PCWLRGSDAILN--AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMI 669
HV VC T P RGS L A+ Q + G+F+++ CLG C P +
Sbjct: 7 HVFVCAQTRPPGHPRGSCGQLGSTAVFQTFMQQFEAGQLYGQFALTSTGCLGTCDLGPTV 66
Query: 670 QVNDD--YYEDLSVEDTKEIISKLKKDEKP 753
V + Y +S D EII + K+ +P
Sbjct: 67 LVYPEGVMYSKVSPADVSEIIEEHLKNGRP 96
>UniRef50_O96948 Cluster: Hydrogenase; n=14; Eukaryota|Rep:
Hydrogenase - Nyctotherus ovalis
Length = 1206
Score = 34.3 bits (75), Expect = 6.7
Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Frame = +1
Query: 355 LXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTP-C 531
+ + + G++ ++ K++E L + + + + Y F R + +C C
Sbjct: 656 IIIEEHDKKGYISDPSIVKISEHLGMYPAQIESILSSYHYFPREHTIAILMSICVHCHNC 715
Query: 532 WLRGSDAILNAIKQETNCEV--GGNSPCGKFSVSEVECLGACVN-APMIQV 675
++G +L I++ + GG + G F++ + LG CVN AP + +
Sbjct: 716 MMKGQGRLLKTIQETYDIHETHGGVAKDGSFTLHTLNWLGYCVNDAPAMMI 766
>UniRef50_P15799 Cluster: Surface antigen CRP170; n=46; Giardia|Rep:
Surface antigen CRP170 - Giardia lamblia (Giardia
intestinalis)
Length = 328
Score = 33.9 bits (74), Expect = 8.9
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +1
Query: 577 TNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKKDEKP 753
T C+ G +P K + + G CV+A Q + YY D SV D KE K + +KP
Sbjct: 117 TKCDANGAAPYLK-KTNPSDPTGTCVSAVDCQGSAGYYTDDSVSDAKE-CKKCAEGQKP 173
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 791,948,230
Number of Sequences: 1657284
Number of extensions: 13431921
Number of successful extensions: 32367
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 31199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32298
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 127960015844
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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