Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C16
         (1261 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical pr...   237   1e-62
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas...    30   4.0  
Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical pr...    29   6.9  
AC024807-3|AAK84614.1|  252|Caenorhabditis elegans Hypothetical ...    29   9.2  

>Z77663-9|CAB01203.1|  239|Caenorhabditis elegans Hypothetical
           protein F53F4.10 protein.
          Length = 239

 Score =  237 bits (580), Expect = 1e-62
 Identities = 116/220 (52%), Positives = 144/220 (65%)
 Frame = +1

Query: 202 QGXMSSLFVHRATPAANPXSPLSARRPIKSAXRLCWPFTL*GHKRGAMXPLLXLAQRQXG 381
           +G  + L VHR T   N           +   +        GHK GA+ PLL LAQRQ G
Sbjct: 21  RGGATGLMVHRDTKENNLNVKFKFTSENQERIKAIMDIYPEGHKAGALIPLLDLAQRQHG 80

Query: 382 GWLPISAMHKVAEXLNLPKMXVYEVATFYTMFIRRPIGKYHVQVCTTTPCWLRGSDAILN 561
            WLPISAMH+VA+ L +P+M  YEVATFYTMF R+P+GKY +QVC TTPC LRG++ I  
Sbjct: 81  -WLPISAMHEVAKILEVPRMRAYEVATFYTMFNRQPVGKYFLQVCATTPCMLRGAETITE 139

Query: 562 AIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDYYEDLSVEDTKEIISKLKK 741
            I+++     G  +  G F+++EVECLGACVNAPMIQ+NDDY+EDL+ +D  EI+  LK 
Sbjct: 140 TIEKKLGIHAGETTKDGLFTLAEVECLGACVNAPMIQINDDYFEDLTPKDVNEILDDLKA 199

Query: 742 DEKPKPGPRSGRFASEPLGGLTSLTEEXTGXGFGVQXALK 861
             KP  GPRSGR A+EP G LTSL E   G GFG+Q ALK
Sbjct: 200 GRKPAAGPRSGRLAAEPFGELTSLKETPPGPGFGLQAALK 239


>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1237

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 517 YILGHGIYQLVVL*TL 470
           YILGH +YQLV+L TL
Sbjct: 899 YILGHAVYQLVILFTL 914


>Z49130-3|CAA88968.1|  395|Caenorhabditis elegans Hypothetical
           protein T06D8.5 protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 331 KRGAMXPLLXLAQRQXGGWLPISAMHKVAEXLNLPKMXVYEVATFYTM 474
           +R A+   L LAQ   G W+  S +       ++P++  Y +AT  TM
Sbjct: 166 RRMALATTLLLAQGGIGWWMVKSGLDPSKNSSDVPRVSQYRLATHLTM 213


>AC024807-3|AAK84614.1|  252|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.3 protein.
          Length = 252

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = +1

Query: 511 VCTTTPCWLRGSDAILNAIKQETNCEVGGNSPCGKFSVSEVECLGACVNAPMIQVNDDY- 687
           VC ++P  L     +  +I+   + + G N      S  +    GAC+  P I  +  Y 
Sbjct: 84  VCVSSPPPLSHHSYLETSIETSKSEQCGANRKTTSMSFQKSFVTGACLTYPFIGQSLTYR 143

Query: 688 -YEDLSVEDTKEIIS 729
             EDL+ +D  +I++
Sbjct: 144 NQEDLAAQDYSKIMT 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,147,280
Number of Sequences: 27780
Number of extensions: 326086
Number of successful extensions: 850
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3505977888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)