Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C15
         (1260 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   146   4e-37
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    48   1e-07
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    27   0.26 
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    27   0.26 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    27   0.46 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    26   0.80 

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  146 bits (354), Expect = 4e-37
 Identities = 83/233 (35%), Positives = 129/233 (55%), Gaps = 1/233 (0%)
 Frame = +3

Query: 171 VPGPFPLPIIGNAHQ-FVVRSTEFLGLLKSFTDKYGDVFRVHFFSYPYVLISHPKYAEAL 347
           +PGP  LP+IGNA   F      F  +LK   + + DV ++       + +  P+  E +
Sbjct: 44  IPGPPALPLIGNALDLFGSPDAMFSQVLKK-AENFKDVVKIWVGPKLVICLIDPRDVEII 102

Query: 348 VSSADLITKGRSYSFLKAWLGEGLLTASGPRWRLHRKFLTPAFHFNILQNFLPVFCKNSE 527
           +SS   I K   Y F K WLG+GLL ++G +WR HRK + P FH N+L++F+ +F  N+ 
Sbjct: 103 LSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLIAPTFHLNVLKSFIDLFNANAR 162

Query: 528 ILRDKIRRLADGQPIDLFPITALAALDNVAESIMGVSVNAQQNSESEYVRAIETLSQITT 707
            + +K+R+  +G+  D     +   +D + E+ MGVS   + ++  EY  A+  +  I  
Sbjct: 163 SVVEKMRK-ENGKEFDCHNYMSELTVDILLETAMGVSKPTRDHNAFEYAMAVMKMCDILH 221

Query: 708 LRMQIPLLGEDFIFNLTSYKKKQNIALEVVHGQTKKVIEARRCELEKNNKTNI 866
           LR     L  D++FNLT Y K Q   LE++HG TKKVI+ ++ E  K+ K NI
Sbjct: 222 LRHTKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQLKK-EEYKSGKRNI 273



 Score = 44.4 bits (100), Expect = 2e-06
 Identities = 21/46 (45%), Positives = 28/46 (60%)
 Frame = +2

Query: 890  KK*TCILDLLLWAEXDGKLMDEQSVRXXVXTFMFEGHDTTTXGMXY 1027
            KK    LDLL+ A  +G L+ ++ V+  V T MFEGHDTT  G  +
Sbjct: 314  KKRQAFLDLLIEAGQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSF 359


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 48.4 bits (110), Expect = 1e-07
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 7/176 (3%)
 Frame = +3

Query: 171 VPGPFPLPIIGNAHQFVVRSTEFLGLLKSFTDKYGDVFRVHFFSY--PYVLISHPKYAEA 344
           V GP P+P  G     ++        +K   +KY +   V  ++   P++L++ P+  + 
Sbjct: 34  VVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLLLNDPELIKD 93

Query: 345 LV--SSADLITKGRSYSFLKAWLGEGLLTASGPRWRLHRKFLTPAFHFNILQN--FLPVF 512
           ++    +    +G         L   LL     RWR  R  L+P F    L+   +L + 
Sbjct: 94  ILIRDFSKFANRGLGVFERTEPLSPHLLNLEVERWRPLRSRLSPIFTSGKLKEMFYLIIE 153

Query: 513 CK-NSEILRDKIRRLADGQPIDLFPITALAALDNVAESIMGVSVNAQQNSESEYVR 677
           C  N E   DK+  +   +PI+   +TA    D +     G+ +++  N  SE+ R
Sbjct: 154 CSLNLETYLDKL--IEKNEPIECRELTARFTTDVIGSCAFGIDMSSMTNENSEFRR 207


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 27.5 bits (58), Expect = 0.26
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 916 KIQNACLFFIPYSLVPLIFVLLFFS 842
           K+   C+F   Y ++PLIF++LF+S
Sbjct: 218 KVFVTCIFIWAY-VIPLIFIILFYS 241


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 27.5 bits (58), Expect = 0.26
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 916 KIQNACLFFIPYSLVPLIFVLLFFS 842
           K+   C+F   Y ++PLIF++LF+S
Sbjct: 218 KVFVTCIFIWAY-VIPLIFIILFYS 241


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 15/58 (25%), Positives = 29/58 (50%)
 Frame = -2

Query: 896 IFYTIFVGSTDICFIIFFKFATSRFNNFFCLSMYHLQGDILFLLIRCQIKDEILAQQW 723
           IF T FVG+   C +I+   +     N++  ++     D+LFL++    +  +  QQ+
Sbjct: 43  IFVTGFVGNIITCIVIWRNPSMQTPTNYYLFNL--AVSDLLFLILGLPFELSVFWQQY 98


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 0.80
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 165 SNVPGPFPLPIIG 203
           S VPGPF LPI G
Sbjct: 51  SKVPGPFSLPIFG 63


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 321,999
Number of Sequences: 438
Number of extensions: 7726
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43102617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)