Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_C14
(1336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.021
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.021
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.021
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.085
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.26
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.26
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.26
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 33 0.46
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 33 0.46
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.46
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.80
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 32 1.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.8
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 2.4
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 2.4
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 4.2
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 4.2
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 5.6
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 5.6
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 29 9.8
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 9.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 9.8
AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine re... 29 9.8
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 9.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.021
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP R G G+P P P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGG 534
P PPP G G PP GG
Sbjct: 299 PP------PPPRGSPPTGSLPPPQAGG 319
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Frame = +1
Query: 1009 PXPPPPXXXXXXXXXXXGGGXXPXXXXXXXXXPPXX---PPXPXXXXXXXXXXXXXXXPX 1179
P PPPP G G P PP PP P P
Sbjct: 237 PPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 293
Query: 1180 GGGXPXXXPXXXXPXXXX-PPPXGGXXPP 1263
G P P P PPP G PP
Sbjct: 294 AGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/93 (23%), Positives = 25/93 (26%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP R P G+ P P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT--GSLPPPQAGGSP 321
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P+ G PPP PP G +P
Sbjct: 322 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +3
Query: 519 GXGXXPPXGGGXPXPHXXXPPXGXXPPPXXGGXXXXXXGXXGGPXXXXXPXXPXXXXXPX 698
G PP G P P PP PPP G P P P P
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 308
Query: 699 XXSFFXXXXXRGGGXXGXXXXXXPPPP 779
S + GG PPPP
Sbjct: 309 TGSL---PPPQAGGSPPPAGTGSPPPP 332
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 650 GAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
G+P P P G G PPP G PPP G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.021
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP R G G+P P P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGG 534
P PPP G G PP GG
Sbjct: 320 PP------PPPRGSPPTGSLPPPQAGG 340
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Frame = +1
Query: 1009 PXPPPPXXXXXXXXXXXGGGXXPXXXXXXXXXPPXX---PPXPXXXXXXXXXXXXXXXPX 1179
P PPPP G G P PP PP P P
Sbjct: 258 PPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 314
Query: 1180 GGGXPXXXPXXXXPXXXX-PPPXGGXXPP 1263
G P P P PPP G PP
Sbjct: 315 AGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/93 (23%), Positives = 25/93 (26%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP R P G+ P P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT--GSLPPPQAGGSP 342
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P+ G PPP PP G +P
Sbjct: 343 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +3
Query: 519 GXGXXPPXGGGXPXPHXXXPPXGXXPPPXXGGXXXXXXGXXGGPXXXXXPXXPXXXXXPX 698
G PP G P P PP PPP G P P P P
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 329
Query: 699 XXSFFXXXXXRGGGXXGXXXXXXPPPP 779
S + GG PPPP
Sbjct: 330 TGSL---PPPQAGGSPPPAGTGSPPPP 353
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 650 GAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
G+P P P G G PPP G PPP G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.021
Identities = 24/87 (27%), Positives = 25/87 (28%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP R G G+P P P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGG 534
P PPP G G PP GG
Sbjct: 305 PP------PPPRGSPPTGSLPPPQAGG 325
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/89 (26%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Frame = +1
Query: 1009 PXPPPPXXXXXXXXXXXGGGXXPXXXXXXXXXPPXX---PPXPXXXXXXXXXXXXXXXPX 1179
P PPPP G G P PP PP P P
Sbjct: 243 PPPPPPPKGSPPLA---GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR 299
Query: 1180 GGGXPXXXPXXXXPXXXX-PPPXGGXXPP 1263
G P P P PPP G PP
Sbjct: 300 AGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Score = 31.5 bits (68), Expect = 1.4
Identities = 22/93 (23%), Positives = 25/93 (26%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP R P G+ P P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPT--GSLPPPQAGGSP 327
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P+ G PPP PP G +P
Sbjct: 328 PPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Score = 31.1 bits (67), Expect = 1.8
Identities = 23/87 (26%), Positives = 24/87 (27%)
Frame = +3
Query: 519 GXGXXPPXGGGXPXPHXXXPPXGXXPPPXXGGXXXXXXGXXGGPXXXXXPXXPXXXXXPX 698
G PP G P P PP PPP G P P P P
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPP----PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPP 314
Query: 699 XXSFFXXXXXRGGGXXGXXXXXXPPPP 779
S + GG PPPP
Sbjct: 315 TGSL---PPPQAGGSPPPAGTGSPPPP 338
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 650 GAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
G+P P P G G PPP G PPP G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPP---PPAAGSPPPPRTGSPPPPP 282
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.5 bits (78), Expect = 0.085
Identities = 26/93 (27%), Positives = 26/93 (27%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPP G PP PG G G P P P
Sbjct: 368 PPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPP-GGPGAPGSYGPP 426
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
GG PPP G G PPP G AP
Sbjct: 427 QGGPGGFGPPPPG--GPGAYGPPPTGFPPVGAP 457
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -3
Query: 650 GAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPPXGG 534
GAP P P P GG PPP + G PPP G
Sbjct: 349 GAPP-PQQFHAPSPQSFGGPPPPVS-SAPGNFAPPPQSG 385
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 2/48 (4%)
Frame = -3
Query: 680 PGXXGXXXXXGAPXXPXXXXXPXPSXGGGX--PPPXGXXSVGGXXPPP 543
PG G G P P P G G PPP G VG PPP
Sbjct: 414 PGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGA--PPP 459
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.26
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 517 GAXXXXPPXGGGXXPPTDXXPXGGGXPPPXEGXGXXXFXGXXGAP 651
G PP GG PP P GG PPP G G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 33.5 bits (73), Expect = 0.34
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +2
Query: 518 GPGXXPPXXGGXPXPPXXKXPXG--XGPPP 601
GP PP GG P PP P G GPPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 521 PGXXPPXXGGXPXPPXXKXPXGXGPPP 601
PG PP GG P PP P G PPP
Sbjct: 748 PGGLPPISGGPPPPP--PPPGGCPPPP 772
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP PG P P P
Sbjct: 713 PPPPPG---LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P PPP G G PPP G AP
Sbjct: 770 PPPP----PPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +3
Query: 525 GXXPPXGGGXPXPHXXXPPXGXXPPPXXGGXXXXXXGXXGGPXXXXXP 668
G PP GG P P PP G PPP G GGP P
Sbjct: 749 GGLPPISGGPPPP--PPPPGGCPPPP----PPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 518 GPGXXPPXXGGXPXPPXXKXPXGXGPPPXXRGXEXXXXXGXXGPXXXXXXP 670
G PP GG P PP G PPP G G P P
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 517 GAXXXXPPXGGGXXPPTDXXPXGG--GXPPPXEGXG 618
G PP GG PP P GG G PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 647 APXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
AP P GG PPP G + G PPP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPP 729
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.26
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 517 GAXXXXPPXGGGXXPPTDXXPXGGGXPPPXEGXGXXXFXGXXGAP 651
G PP GG PP P GG PPP G G P
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 33.5 bits (73), Expect = 0.34
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +2
Query: 518 GPGXXPPXXGGXPXPPXXKXPXG--XGPPP 601
GP PP GG P PP P G GPPP
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 521 PGXXPPXXGGXPXPPXXKXPXGXGPPP 601
PG PP GG P PP P G PPP
Sbjct: 748 PGGLPPISGGPPPPP--PPPGGCPPPP 772
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP PG P P P
Sbjct: 713 PPPPPG---LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P PPP G G PPP G AP
Sbjct: 770 PPPP----PPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +3
Query: 525 GXXPPXGGGXPXPHXXXPPXGXXPPPXXGGXXXXXXGXXGGPXXXXXP 668
G PP GG P P PP G PPP G GGP P
Sbjct: 749 GGLPPISGGPPPP--PPPPGGCPPPP----PPPPPGGFKGGPPPPPPP 790
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 518 GPGXXPPXXGGXPXPPXXKXPXGXGPPPXXRGXEXXXXXGXXGPXXXXXXP 670
G PP GG P PP G PPP G G P P
Sbjct: 702 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 752
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 517 GAXXXXPPXGGGXXPPTDXXPXGG--GXPPPXEGXG 618
G PP GG PP P GG G PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 647 APXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
AP P GG PPP G + G PPP
Sbjct: 695 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPP 729
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.26
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 517 GAXXXXPPXGGGXXPPTDXXPXGGGXPPPXEGXGXXXFXGXXGAP 651
G PP GG PP P GG PPP G G P
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 33.5 bits (73), Expect = 0.34
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +2
Query: 518 GPGXXPPXXGGXPXPPXXKXPXG--XGPPP 601
GP PP GG P PP P G GPPP
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 31.9 bits (69), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 521 PGXXPPXXGGXPXPPXXKXPXGXGPPP 601
PG PP GG P PP P G PPP
Sbjct: 331 PGGLPPISGGPPPPP--PPPGGCPPPP 355
Score = 30.7 bits (66), Expect = 2.4
Identities = 25/93 (26%), Positives = 25/93 (26%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXP 615
PPPP G PPP PG P P P
Sbjct: 296 PPPPPG---LPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Query: 614 XPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P PPP G G PPP G AP
Sbjct: 353 PPPP----PPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +3
Query: 525 GXXPPXGGGXPXPHXXXPPXGXXPPPXXGGXXXXXXGXXGGPXXXXXP 668
G PP GG P P PP G PPP G GGP P
Sbjct: 332 GGLPPISGGPPPP--PPPPGGCPPPP----PPPPPGGFKGGPPPPPPP 373
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 518 GPGXXPPXXGGXPXPPXXKXPXGXGPPPXXRGXEXXXXXGXXGPXXXXXXP 670
G PP GG P PP G PPP G G P P
Sbjct: 285 GSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP 335
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +1
Query: 517 GAXXXXPPXGGGXXPPTDXXPXGG--GXPPPXEGXG 618
G PP GG PP P GG G PPP G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -3
Query: 647 APXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
AP P GG PPP G + G PPP
Sbjct: 278 APSTSAGGSSALPPITGGPPPPPGLPPITGGPPPP 312
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.46
Identities = 25/90 (27%), Positives = 25/90 (27%)
Frame = -1
Query: 793 PPPPXGGGGXXXXXXPXXPPPRXXXXKKKXXXXGXXXXXGXXGXXXXXGPPXXPXXXXFX 614
PP P GG G P P R G G G G
Sbjct: 204 PPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQG 263
Query: 613 PPXXGGGXXPXGGFXXWGXGXPPPXGGXXP 524
PP GG P G G G P P G P
Sbjct: 264 PPGDAGGPGPVG-----GQGPPGPQGPQGP 288
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.46
Identities = 25/90 (27%), Positives = 25/90 (27%)
Frame = -1
Query: 793 PPPPXGGGGXXXXXXPXXPPPRXXXXKKKXXXXGXXXXXGXXGXXXXXGPPXXPXXXXFX 614
PP P GG G P P R G G G G
Sbjct: 204 PPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQG 263
Query: 613 PPXXGGGXXPXGGFXXWGXGXPPPXGGXXP 524
PP GG P G G G P P G P
Sbjct: 264 PPGDAGGPGPVG-----GQGPPGPQGPQGP 288
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.1 bits (72), Expect = 0.46
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 610 PXXGGGXXPXGGFXXWGXGXPPPXGG 533
P GG P GG W G PPP GG
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGG 1579
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 611 PSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P GG PP G G PPP GG P
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGP 1585
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.80
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 680 PGXXGXXXXXGAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
PG G G P P P P G P P G V G PP
Sbjct: 223 PGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPP 268
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.9 bits (69), Expect = 1.1
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = -3
Query: 677 GXXGXXXXXGAPXXPX-XXXXPXPSXGGGXPPPXGXXSVGGXXPPPXGG 534
G G GAP P P P+ GGG PPP + P GG
Sbjct: 23 GGGGGGCGCGAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYGAPAGG 71
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -3
Query: 740 PPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXPXPSXGG-GXPPPXGXXSV 564
PPP PG G G P P P GG PPP G
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 344
Query: 563 GGXXPPP 543
GG PPP
Sbjct: 345 GGMPPPP 351
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 533 PPXXGGXPXPPXX--KXPXGXGPPPXXR 610
PP GG P PP + P G PPP R
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPR 354
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = -3
Query: 740 PPPXXXXXXKKRXXXXXXXXPGXXGXXXXXGAPXXPXXXXXPXPSXGG-GXPPPXGXXSV 564
PPP PG G G P P P GG PPP G
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPGMGGMPPPPPPGMRYP 354
Query: 563 GGXXPPP 543
GG PPP
Sbjct: 355 GGMPPPP 361
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 533 PPXXGGXPXPPXX--KXPXGXGPPPXXR 610
PP GG P PP + P G PPP R
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPR 364
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -3
Query: 680 PGXXGXXXXXGAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
PG G G P P P P G P P G G PP
Sbjct: 218 PGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPP 263
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 30.7 bits (66), Expect = 2.4
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = -3
Query: 680 PGXXGXXXXXGAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
PG G G P P P P G P P G G PP
Sbjct: 218 PGDSGPPGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPP 263
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.9 bits (64), Expect = 4.2
Identities = 25/92 (27%), Positives = 27/92 (29%)
Frame = -1
Query: 793 PPPPXGGGGXXXXXXPXXPPPRXXXXKKKXXXXGXXXXXGXXGXXXXXGPPXXPXXXXFX 614
P P GG P PPP ++ G G P P
Sbjct: 115 PFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGM-FNVPTGPPPLMGGGGDPRGPPGGMGG 173
Query: 613 PPXXGGGXXPXGGFXXWGXGXPPPXGGXXPXP 518
PP GG P G G G PP GG P
Sbjct: 174 PPGHGGMGGPPG---HGGQGGPPGHGGMGGPP 202
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.9 bits (64), Expect = 4.2
Identities = 25/92 (27%), Positives = 27/92 (29%)
Frame = -1
Query: 793 PPPPXGGGGXXXXXXPXXPPPRXXXXKKKXXXXGXXXXXGXXGXXXXXGPPXXPXXXXFX 614
P P GG P PPP ++ G G P P
Sbjct: 395 PFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGM-FNVPTGPPPLMGGGGDPRGPPGGMGG 453
Query: 613 PPXXGGGXXPXGGFXXWGXGXPPPXGGXXPXP 518
PP GG P G G G PP GG P
Sbjct: 454 PPGHGGMGGPPG---HGGQGGPPGHGGMGGPP 482
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 677 GXXGXXXXXGAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
G G G P P P P G P P G V G PP
Sbjct: 226 GDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPP 270
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -3
Query: 677 GXXGXXXXXGAPXXPXXXXXPXPSXGGGXPPPXGXXSVGGXXPPP 543
G G G P P P P G P P G V G PP
Sbjct: 226 GDAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPP 270
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/94 (24%), Positives = 25/94 (26%), Gaps = 1/94 (1%)
Frame = -3
Query: 794 PPPPXGGGGXXXXXXXXXPPPXXXXXXKKRXXXXXXXXP-GXXGXXXXXGAPXXPXXXXX 618
PP P G G P + P G G GAP P
Sbjct: 168 PPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGST 227
Query: 617 PXPSXGGGXPPPXGXXSVGGXXPPPXGGXXXXAP 516
P P+ G P P G G P AP
Sbjct: 228 PGPAGPPGPPGPNGQPGHPGQDGQPGAPGNDGAP 261
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -3
Query: 617 PXPSXGGGXPPPXGXXSVGGXXPPPXGG 534
P P GGG PP G + G P GG
Sbjct: 34 PRPGNGGGRPPGNGNGNGNGGGRPTNGG 61
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 1127 GXGGXXGGXXXXXXXXXGXXPPPXXXXXXXXXXXGGGGXG 1008
G GG GG G PPP GGGG G
Sbjct: 91 GCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCG 130
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 535 PPXGGGXXPPTDXXPXGGGXPPPXEGXGXXXFXGXXGAPXXXXXPXXPG 681
PP G G PP GG PPP G GAP P G
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
>AF098504-5|AAC67410.3| 322|Caenorhabditis elegans Serpentine
receptor, class t protein62 protein.
Length = 322
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -1
Query: 187 KVAGCYTKVASFTF---STIHMHLNLCIISFFNF 95
K+ Y+K F F STI +++N C+++ FNF
Sbjct: 287 KICSKYSKFKMFEFFNYSTIPININACVLARFNF 320
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 732 GGGXXGXXXXXXPPPPXGGGG 794
GG G PPPP GGGG
Sbjct: 202 GGSGGGSGRFPPPPPPYGGGG 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,375,856
Number of Sequences: 27780
Number of extensions: 462273
Number of successful extensions: 2771
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2175
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3746404080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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