Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C13
         (1347 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    29   8.4  

>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 29.1 bits (62), Expect = 8.4
 Identities = 19/77 (24%), Positives = 23/77 (29%)
 Frame = +3

Query: 636 GXXGFPPXXGXXPEKXFXPRXPKXXXXXKXXVWGXFXXGPPPLXNFQKIXPXFXGGXPXX 815
           G  G PP  G  P     P   +        +WG     PP +       P    G P  
Sbjct: 14  GGGGAPPQWGAIPPPV--PHQQQQYAPPPPQMWGQAPPPPPQMWGQAPPPPQPAYGQPPP 71

Query: 816 GXXKFXGFPPXXPPXXP 866
               + G PP   P  P
Sbjct: 72  AQAGYYGAPPQAAPAVP 88


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,554,803
Number of Sequences: 37544
Number of extensions: 336324
Number of successful extensions: 347
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4236833328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)