Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C11
         (1275 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56246 Cluster: PREDICTED: similar to ribonuclea...    42   0.026
UniRef50_A6QS10 Cluster: Putative uncharacterized protein; n=1; ...    38   0.42 
UniRef50_Q8DW20 Cluster: Putative transcriptional regulator; n=1...    36   2.2  
UniRef50_A5N5V7 Cluster: Predicted DNA-binding protein; n=5; Clo...    36   3.0  
UniRef50_A3IG12 Cluster: Drug resistance transporter, EmrB/QacA ...    36   3.0  
UniRef50_A7QF71 Cluster: Chromosome undetermined scaffold_87, wh...    34   6.8  
UniRef50_Q9VF10 Cluster: CG4221-PA; n=6; Endopterygota|Rep: CG42...    34   6.8  
UniRef50_A1CQ65 Cluster: Vesicle transport v-SNARE protein super...    34   9.0  

>UniRef50_UPI0000D56246 Cluster: PREDICTED: similar to ribonuclease
           P 40kDa subunit; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to ribonuclease P 40kDa subunit -
           Tribolium castaneum
          Length = 623

 Score = 42.3 bits (95), Expect = 0.026
 Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
 Frame = +1

Query: 526 IETLSKFSRLVVLDLKFICTDEILNVVGLNCLLLEELNIVSKVDIYKSLFNASVLIRNVS 705
           +E +S    L  L L F CTD+++ VVG NC  ++ L++ S   +      + +   ++ 
Sbjct: 96  VEGISGMKHLRSLCLCFDCTDQVIQVVGDNCPFIQCLDVTSSRSVTDRSIPSLLKCNHLR 155

Query: 706 DAGLY--SIAPLKLLRILAMDPPRNERANRVGRCVSQAGIIMLINE 837
           +  L+  S+ P+ L +IL       ++   +GRC    G+I ++++
Sbjct: 156 ELQLHRTSVTPVGLAQILR----GLDKLQDIGRCDDFRGVIKMLHQ 197


>UniRef50_A6QS10 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 551

 Score = 38.3 bits (85), Expect = 0.42
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
 Frame = +1

Query: 553 LVVLDLKFICTDEILNVVGLNCLLLEELNIVSKVDIY-KSLFNASVLIRNVSDAGLYSIA 729
           L V DLK + TD  L VV  NCL L+ LNI   + +  +SL + +   R +    L  +A
Sbjct: 193 LDVSDLKSL-TDHTLFVVARNCLRLQGLNISGCIKVTDESLISIAENCRQIKRLKLNGVA 251

Query: 730 PL--KLLRILAMDPPRNERANRVG-RCVSQAGIIMLINELPRLEELRIESC 873
               + ++  A + P     +  G R ++ + +  L++ L  L ELR+  C
Sbjct: 252 QATDRSIQSFAANCPSILEIDLQGCRLITSSSVTALLSTLRNLRELRLAHC 302


>UniRef50_Q8DW20 Cluster: Putative transcriptional regulator; n=1;
           Streptococcus mutans|Rep: Putative transcriptional
           regulator - Streptococcus mutans
          Length = 318

 Score = 35.9 bits (79), Expect = 2.2
 Identities = 25/84 (29%), Positives = 42/84 (50%)
 Frame = +1

Query: 538 SKFSRLVVLDLKFICTDEILNVVGLNCLLLEELNIVSKVDIYKSLFNASVLIRNVSDAGL 717
           SK   +  L  K++    +L ++    +L+E+  ++  VD Y S+FN  ++ RNVS+   
Sbjct: 153 SKKENVSKLGKKYLKLIALLAMIASVAILIEDTFVIFTVDQY-SIFNTKIMNRNVSEDLF 211

Query: 718 YSIAPLKLLRILAMDPPRNERANR 789
             IA   LL     D P  E+ N+
Sbjct: 212 SIIACWLLLYYFLKDYPLLEKRNQ 235


>UniRef50_A5N5V7 Cluster: Predicted DNA-binding protein; n=5;
           Clostridiales|Rep: Predicted DNA-binding protein -
           Clostridium kluyveri DSM 555
          Length = 122

 Score = 35.5 bits (78), Expect = 3.0
 Identities = 22/85 (25%), Positives = 43/85 (50%)
 Frame = +1

Query: 436 PRIQLHVLTHPNMTVFRKCDLDNSIPQPFWIETLSKFSRLVVLDLKFICTDEILNVVGLN 615
           PR    V T P +  F   D+   I +P  I T+ ++  + ++DL+ +  +E  +V+G+ 
Sbjct: 4   PRKWRKVCTLPQINKFGPVDISKDINEPI-IMTVEEYETIRLMDLEGLNQEESASVMGVA 62

Query: 616 CLLLEELNIVSKVDIYKSLFNASVL 690
              ++ +   ++  I KSL N  +L
Sbjct: 63  RSTIQRIYDDARKKIAKSLVNGKIL 87


>UniRef50_A3IG12 Cluster: Drug resistance transporter, EmrB/QacA
           family protein; n=1; Bacillus sp. B14905|Rep: Drug
           resistance transporter, EmrB/QacA family protein -
           Bacillus sp. B14905
          Length = 480

 Score = 35.5 bits (78), Expect = 3.0
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
 Frame = +1

Query: 610 LNCLLLEELNIVSKVDIYKSLFNASVLIRNVSDAGLYSIAPLKLLRILAMDPPRNERANR 789
           +N L L  ++IV  V +Y  ++  SVL +N + AGL  + P+ +   +            
Sbjct: 261 INSLTLSTMSIVIGVTVYIPIYAQSVLGKNATQAGLL-LTPMSIFWTMNSIAAGYLIGRL 319

Query: 790 VGRCVSQAGIIMLINELPRLEELRIESCD----IGSTLIGTVM 906
             + + Q G I+L+     L  L   S D    +GS+LIG  M
Sbjct: 320 TNKRIIQMGTILLVTGTIMLARLSSGSSDLSVYLGSSLIGLGM 362


>UniRef50_A7QF71 Cluster: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_87, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 446

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
 Frame = +1

Query: 496 LDNSIPQPFWIETLSKFSRLVVLDLKFICTDEILNVVGLNCLLL--EELNIVSKVDIYKS 669
           L N +     IE LSK + L     K    DE+ ++V L  L+L   E+  + ++D  K 
Sbjct: 71  LQNKLQSLEGIEELSKLTVLNAGKNKLRSMDEVRSLVSLRALILNDNEIGSICRLDRMKD 130

Query: 670 LFNASVLIRN-VSDAGLYSIAPLKLLRILAMDPPRNER-ANRVGRCVSQAGIIMLINELP 843
           L N  VL RN V + G  S+  LK +  L++   + +   + +  C+    + +  N++ 
Sbjct: 131 L-NTLVLSRNPVHEIG-ESLVKLKSITKLSLSKCQIQSIGSSLKSCIELKELRLAHNDIK 188

Query: 844 RL-EEL----RIESCDIGSTLI 894
            L  EL    ++++ D+G+ LI
Sbjct: 189 TLPAELAYNTKLQNLDLGNNLI 210


>UniRef50_Q9VF10 Cluster: CG4221-PA; n=6; Endopterygota|Rep:
           CG4221-PA - Drosophila melanogaster (Fruit fly)
          Length = 772

 Score = 34.3 bits (75), Expect = 6.8
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 742 LRILAMDPPRNERANRVGRC-VSQAGIIMLINELPRLEELRIESCDI 879
           + +LA   PR  RA  +G+C VS AG+  L    P L++L + SCD+
Sbjct: 676 ITVLARSCPRL-RALDIGKCDVSDAGLRALAESCPNLKKLSLRSCDM 721


>UniRef50_A1CQ65 Cluster: Vesicle transport v-SNARE protein
           superfamily; n=16; Pezizomycotina|Rep: Vesicle transport
           v-SNARE protein superfamily - Aspergillus clavatus
          Length = 227

 Score = 33.9 bits (74), Expect = 9.0
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
 Frame = +3

Query: 411 NMLPVPWRSSYSAPRVDSS------QHDSLPQMRSR*LNTPTILDRNSLEIQSSCRSRPQ 572
           +M  +P + S    RV+S       + DSL    SR L++   L  ++L+  +  R R  
Sbjct: 35  SMAKLPPKPSEEEQRVESQLKDLLERRDSLISQLSRLLDSEATLTASALKQNNLTRHREV 94

Query: 573 IHMHRRNTQRSRPELSPSRGTKHSLES 653
           +H HRR  QR    ++ SR   + L +
Sbjct: 95  LHDHRRELQRLNSAIAESRDRANLLSN 121


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 899,810,328
Number of Sequences: 1657284
Number of extensions: 16528013
Number of successful extensions: 42350
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42330
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 129984699639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)