Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C11
         (1275 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        25   6.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   8.2  

>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 18/72 (25%), Positives = 33/72 (45%)
 Frame = -2

Query: 806 ETQRPTRLARSFRGGSIARIRKSFNGAIEYKPASDTFLIKTDALKRDLYISTFETMFSSS 627
           ET+R   L ++  GG+   + K  +  ++YK      L+ TD +  D  ++  +   S  
Sbjct: 87  ETER--ELQQALSGGNSQAVPKLQDDLLQYKQQQQQNLLITDRIFYDTTVTLLQKYHSII 144

Query: 626 RRRQFRPTTLSI 591
             R +  TT S+
Sbjct: 145 AAR-YNATTQSV 155


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 554 RRLNFERVSIQNGWGIELSRSHLRKT 477
           RRL   R+S   GWG +  R  +++T
Sbjct: 697 RRLCILRLSFVKGWGPDYPRQSIKET 722


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 960,702
Number of Sequences: 2352
Number of extensions: 17237
Number of successful extensions: 32
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 146331426
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)