Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C11
         (1275 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130470-1|AAI30471.1|  577|Homo sapiens HECT domain containing ...    31   9.0  
BC126352-1|AAI26353.1|  577|Homo sapiens HECT domain containing ...    31   9.0  
BC019105-1|AAH19105.1|  210|Homo sapiens HECTD3 protein protein.       31   9.0  
AL359473-2|CAI16438.1|  861|Homo sapiens HECT domain containing ...    31   9.0  
AL359473-1|CAI16437.1|  471|Homo sapiens HECT domain containing ...    31   9.0  
AK024809-1|BAB15015.1|  210|Homo sapiens protein ( Homo sapiens ...    31   9.0  

>BC130470-1|AAI30471.1|  577|Homo sapiens HECT domain containing 3
           protein.
          Length = 577

 Score = 31.1 bits (67), Expect = 9.0
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 322 DECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDPRIQLHVLTHPNMTVFRKCDLD 501
           +E +++V +++  L+ V+P  + D+L  +    +  GDP + +  L    +T F   +  
Sbjct: 425 EESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALR--KLTRFEDFEPS 482

Query: 502 NSIPQPFWIETLSKFS 549
           +S  Q FW E L+ F+
Sbjct: 483 DSRVQYFW-EALNNFT 497


>BC126352-1|AAI26353.1|  577|Homo sapiens HECT domain containing 3
           protein.
          Length = 577

 Score = 31.1 bits (67), Expect = 9.0
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 322 DECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDPRIQLHVLTHPNMTVFRKCDLD 501
           +E +++V +++  L+ V+P  + D+L  +    +  GDP + +  L    +T F   +  
Sbjct: 425 EESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALR--KLTRFEDFEPS 482

Query: 502 NSIPQPFWIETLSKFS 549
           +S  Q FW E L+ F+
Sbjct: 483 DSRVQYFW-EALNNFT 497


>BC019105-1|AAH19105.1|  210|Homo sapiens HECTD3 protein protein.
          Length = 210

 Score = 31.1 bits (67), Expect = 9.0
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 322 DECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDPRIQLHVLTHPNMTVFRKCDLD 501
           +E +++V +++  L+ V+P  + D+L  +    +  GDP + +  L    +T F   +  
Sbjct: 58  EESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALR--KLTRFEDFEPS 115

Query: 502 NSIPQPFWIETLSKFS 549
           +S  Q FW E L+ F+
Sbjct: 116 DSRVQYFW-EALNNFT 130


>AL359473-2|CAI16438.1|  861|Homo sapiens HECT domain containing 3
           protein.
          Length = 861

 Score = 31.1 bits (67), Expect = 9.0
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 322 DECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDPRIQLHVLTHPNMTVFRKCDLD 501
           +E +++V +++  L+ V+P  + D+L  +    +  GDP + +  L    +T F   +  
Sbjct: 709 EESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALR--KLTRFEDFEPS 766

Query: 502 NSIPQPFWIETLSKFS 549
           +S  Q FW E L+ F+
Sbjct: 767 DSRVQYFW-EALNNFT 781


>AL359473-1|CAI16437.1|  471|Homo sapiens HECT domain containing 3
           protein.
          Length = 471

 Score = 31.1 bits (67), Expect = 9.0
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 322 DECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDPRIQLHVLTHPNMTVFRKCDLD 501
           +E +++V +++  L+ V+P  + D+L  +    +  GDP + +  L    +T F   +  
Sbjct: 319 EESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALR--KLTRFEDFEPS 376

Query: 502 NSIPQPFWIETLSKFS 549
           +S  Q FW E L+ F+
Sbjct: 377 DSRVQYFW-EALNNFT 391


>AK024809-1|BAB15015.1|  210|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21156 fis, clone CAS09878. ).
          Length = 210

 Score = 31.1 bits (67), Expect = 9.0
 Identities = 20/76 (26%), Positives = 40/76 (52%)
 Frame = +1

Query: 322 DECEKKVYSLKCHLMTVLPCRLFDVLCSERTCCQYRGDPRIQLHVLTHPNMTVFRKCDLD 501
           +E +++V +++  L+ V+P  + D+L  +    +  GDP + +  L    +T F   +  
Sbjct: 58  EESKEQVAAMQAGLLKVVPQAVLDLLTWQELEKKVCGDPEVTVDALR--KLTRFEDFEPS 115

Query: 502 NSIPQPFWIETLSKFS 549
           +S  Q FW E L+ F+
Sbjct: 116 DSRVQYFW-EALNNFT 130


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,046,097
Number of Sequences: 237096
Number of extensions: 2451907
Number of successful extensions: 5871
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5869
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18275348360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)