Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C11
         (1275 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058675-1|AAL13904.1|  772|Drosophila melanogaster LD38495p pro...    34   0.36 
AE014297-2112|AAF55252.2|  772|Drosophila melanogaster CG4221-PA...    34   0.36 
AE013599-3630|AAF47029.1| 1000|Drosophila melanogaster CG5372-PA...    30   5.9  

>AY058675-1|AAL13904.1|  772|Drosophila melanogaster LD38495p
           protein.
          Length = 772

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 742 LRILAMDPPRNERANRVGRC-VSQAGIIMLINELPRLEELRIESCDI 879
           + +LA   PR  RA  +G+C VS AG+  L    P L++L + SCD+
Sbjct: 676 ITVLARSCPRL-RALDIGKCDVSDAGLRALAESCPNLKKLSLRSCDM 721


>AE014297-2112|AAF55252.2|  772|Drosophila melanogaster CG4221-PA
           protein.
          Length = 772

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +1

Query: 742 LRILAMDPPRNERANRVGRC-VSQAGIIMLINELPRLEELRIESCDI 879
           + +LA   PR  RA  +G+C VS AG+  L    P L++L + SCD+
Sbjct: 676 ITVLARSCPRL-RALDIGKCDVSDAGLRALAESCPNLKKLSLRSCDM 721


>AE013599-3630|AAF47029.1| 1000|Drosophila melanogaster CG5372-PA
           protein.
          Length = 1000

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
 Frame = +1

Query: 424 YRGDPRIQLHVLTHPNMTVFRKCDLDNSIPQPFWIETLSKFSRLVVLDLKFICT-DEILN 600
           YR  P +++H          R      ++   + +ET SK  ++   +L F  T DE+L 
Sbjct: 431 YRAYPVVKIHATVRSESRAIRPEQETITVTACYRLETTSKARQMQQQELTFRMTIDELLQ 490

Query: 601 VVGLNCLLLEELNIVSKVDIYKSLFNASVLIRNVSDAGLYSIAPLKLLRILAMDPPRNER 780
            V    +   E++  ++  +  S  N SV +      G+++   L+L   LA   P +  
Sbjct: 491 RVSFAPMRTNEVSFQAQAGLSGSCRNFSVGVHYT--GGIFTPIDLELHYELAKKIPHSHE 548

Query: 781 A 783
           A
Sbjct: 549 A 549


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,439,987
Number of Sequences: 53049
Number of extensions: 806431
Number of successful extensions: 2032
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2032
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6865736385
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)