Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C10
         (1255 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0581 + 18986084-18986176,18986284-18986668,18986779-189868...    31   1.9  
04_03_0144 + 11796550-11797178,11797808-11797902,11798053-117981...    30   4.4  

>08_02_0581 +
           18986084-18986176,18986284-18986668,18986779-18986861,
           18986966-18987110,18987823-18987951,18988047-18988171,
           18988261-18988419,18988503-18988665,18988750-18988875,
           18989110-18989471,18989572-18989772,18989873-18989982,
           18990079-18990163,18990298-18990426,18990505-18990610,
           18990688-18990776,18990885-18991184
          Length = 929

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -2

Query: 618 TETPSKIKQVVWVILPHFSKTYHRGGCDKLRLPKRE 511
           +E   ++KQ+V  + P  ++ YH  G  K  LPK+E
Sbjct: 847 SEHEQEVKQLVQHLSPSANRIYHISGTQKFELPKQE 882


>04_03_0144 +
           11796550-11797178,11797808-11797902,11798053-11798102,
           11798382-11799293
          Length = 561

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = +2

Query: 602 LEGVSVKHLENYYEDLTCLKTIFNHTVEVLTPSVYN---GSLVQELALVPLTELEKESLI 772
           LEG  +KH+E   +    L+T+    ++V +  +++    S ++ +  VP  E E+E L 
Sbjct: 231 LEGYELKHIECTADGYPALQTVSGLQLKVSSSIMFDRGIKSCLEYIEAVPWNENEEEKLK 290

Query: 773 QKYGSMNLALEVRKDLMVMMR 835
             +        V KD++  ++
Sbjct: 291 NLFARCTFDEAVSKDVLARLK 311


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,078,595
Number of Sequences: 37544
Number of extensions: 442983
Number of successful extensions: 799
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3876004116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)