Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C10
         (1255 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    27   0.87 
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    26   2.0  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    25   3.5  

>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 0.87
 Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
 Frame = +2

Query: 563 EKCGKITQTTCLILEGVSVKHLENYYEDLTCLKTIFNHTVEVLTPSVYNGSLVQELALVP 742
           ++CG     TC  L  +      + Y+D +  +          + S+Y  +  + ++ VP
Sbjct: 42  QECGTACPKTCADLNDLPKACTLHVYKDASASQDS--------SESLYMANAFRNVS-VP 92

Query: 743 LTELEKES----LIQKYGSMNLALEVRKDLMVMMRAIFPIVDQSESTNEIRCNDRF 898
            T++ KE     LIQ YG++      +  LMV++  I  ++   ++ N+   N+RF
Sbjct: 93  ATKVLKEEKDQPLIQPYGNIKSCSFFKSLLMVLVLLINVVIADGDTCND--ANERF 146


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +1

Query: 445 SRNYKC*KGTISTYRYSTSFTPFPFRKP*FITATSVVCFRKM 570
           +R+Y   KG+++T  Y  S T   ++ P ++++  +  FR++
Sbjct: 175 NRHYYTYKGSLTTPPYFESVTWLVYKTPIYVSSKQLEAFRQL 216


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +2

Query: 605 EGVSVKHLENYYEDLTCLKTIFNHTVEVLT 694
           EGVS+  L   Y +  C K    H VE +T
Sbjct: 210 EGVSIDRLNAQYGEGHCEKEFKTHAVECIT 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,090,321
Number of Sequences: 2352
Number of extensions: 19529
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 143470197
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)