Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C08
         (1272 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   2.8  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    24   2.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   6.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   8.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 210 HPDSQLFSCSKCTYT 166
           H  S+ F C+KC YT
Sbjct: 253 HAGSKPFQCNKCDYT 267


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 210 HPDSQLFSCSKCTYT 166
           H  S+ F C+KC YT
Sbjct: 11  HAGSKPFQCNKCDYT 25


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 11/51 (21%), Positives = 25/51 (49%)
 Frame = +1

Query: 625 CRVPLITSQKEEQLLIMSTSEPVVKLLINRHNNKYSYTSTSDDNLLKNIEL 777
           C  P+I +  + ++L         KLLIN +   Y++  +  ++ +  ++L
Sbjct: 93  CSAPIIITILDIEILGYVNKAKFGKLLINLYTINYNFKESERNDYVSLLQL 143


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 932  ILRLSSRRPGYMRKHWEFYFTKVV 1003
            +LRL +  PG+   H  F F  V+
Sbjct: 656  VLRLRANNPGFWLFHCHFLFHIVI 679


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,240
Number of Sequences: 336
Number of extensions: 5170
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37405004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)