Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_C04
(1272 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 208 3e-52
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 117 6e-25
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 92 2e-17
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 70 1e-10
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 70 1e-10
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 66 2e-09
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 54 8e-06
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 52 4e-05
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 50 1e-04
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 50 2e-04
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 48 4e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 46 0.002
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 208 bits (507), Expect = 3e-52
Identities = 98/120 (81%), Positives = 99/120 (82%)
Frame = +2
Query: 623 SKRPXTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLXRP 802
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALL RP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 803 CRLPDTCPPFSLREAWRXLIAHAVGISXRCRSXAPSWXGCTNPXFSPTGGPYPVXIX*XP 982
CRLPDTCPPFSLREAWR LIAHAVGIS RCRS APSW CTNP FSPT PYPV I P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 117 bits (282), Expect = 6e-25
Identities = 69/112 (61%), Positives = 73/112 (65%)
Frame = +2
Query: 479 GALPLPRSLTRCARSXGCGERYQLTQRR*YGYPXNQGITQEXTCXQKASKRPXTVKRPRC 658
G +PLPRSLTR ARS GCGERY+LT G E T + SK RPR
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEEI---RPRR 81
Query: 659 WRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLXRPCRLP 814
RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALL P LP
Sbjct: 82 SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 92.3 bits (219), Expect = 2e-17
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +2
Query: 641 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLXRP 802
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALL P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 70.1 bits (164), Expect = 1e-10
Identities = 36/75 (48%), Positives = 43/75 (57%)
Frame = -3
Query: 988 PGWXSXDXYRIRXTXRAEXGVXAPXPAWXXRPTPX*DTYSVSYEXAPRFPKGERRTGIR* 809
PGW D YR + RAE GV A PAW RP P DT SVSYE APRFPKG++ +
Sbjct: 8 PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV-- 65
Query: 808 XAGSXQESARGSFQG 764
+G Q R + +G
Sbjct: 66 -SGKRQGRNRRAHEG 79
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 69.7 bits (163), Expect = 1e-10
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = +1
Query: 781 VRSPVPTLPXTGYLSAFLPSGSVALXHSSRCRYLXXV 891
+RSPVPTLP TGYLSAFLPSGSVAL HSSRCRYL V
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 66.1 bits (154), Expect = 2e-09
Identities = 38/89 (42%), Positives = 41/89 (46%)
Frame = +2
Query: 716 VRGGETRQDYKDTRRFPLEAPSCALLXRPCRLPDTCPPFSLREAWRXLIAHAVGISXRCR 895
VR GETRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 896 SXAPSWXGCTNPXFSPTGGPYPVXIX*XP 982
S APSW NP FSPT PYPV + P
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHLSP 111
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 54.0 bits (124), Expect = 8e-06
Identities = 33/105 (31%), Positives = 47/105 (44%)
Frame = +2
Query: 488 PLPRSLTRCARSXGCGERYQLTQRR*YGYPXNQGITQEXTCXQKASKRPXTVKRPRCWRF 667
PLP C C L + +P N I + + + + P T F
Sbjct: 14 PLPNKTRYCCHRQQC----LLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLF 69
Query: 668 SIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLXRP 802
S PLT+ITKI Q + +T+ +YK T FPL++PS +LL P
Sbjct: 70 PYNSPPLTTITKIYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 51.6 bits (118), Expect = 4e-05
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -3
Query: 991 LPGWXSXDXYRIRXTXRAEXGVXAPXPAWXXRPTP 887
LPGW D YRIR + RAE GV A PAW RPTP
Sbjct: 7 LPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 50.0 bits (114), Expect = 1e-04
Identities = 22/38 (57%), Positives = 24/38 (63%)
Frame = -3
Query: 988 PGWXSXDXYRIRXTXRAEXGVXAPXPAWXXRPTPX*DT 875
PGW + YRIR + RAE GV A PAW RPTP DT
Sbjct: 8 PGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 49.6 bits (113), Expect = 2e-04
Identities = 28/57 (49%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +2
Query: 431 CXNESANARGXAVXVXGALPLPRSLTRCARSXGCGERYQL-TQRR*YGYPXNQGITQ 598
C + A AR AV V ALPL RS TRC RS GCG + R YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 48.4 bits (110), Expect = 4e-04
Identities = 22/32 (68%), Positives = 22/32 (68%)
Frame = -3
Query: 631 PFAGLLXTCXFLRYPLIXWITVLPPLSELIPL 536
P L TC F YPLI WITVLPPLSEL PL
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 46.4 bits (105), Expect = 0.002
Identities = 25/41 (60%), Positives = 25/41 (60%)
Frame = +1
Query: 487 SASSLTDXXXXXXXXXXXXXXHSKAVIRLSTXSGDNAGXNM 609
SASSLTD HSKAVIRLST SGDNAG NM
Sbjct: 19 SASSLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,350,280
Number of Sequences: 1657284
Number of extensions: 11981430
Number of successful extensions: 22161
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22152
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 129579762880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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