Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_C03
(1274 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 456 e-127
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 423 e-117
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 354 2e-96
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 210 4e-53
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 204 4e-51
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 202 2e-50
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 198 2e-49
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 194 3e-48
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 191 3e-47
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 185 2e-45
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 182 2e-44
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 169 1e-40
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 169 2e-40
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 161 5e-38
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 159 1e-37
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 157 6e-37
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 155 2e-36
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 9e-23
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 106 1e-21
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 105 2e-21
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 105 2e-21
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 100 9e-20
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 98 4e-19
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 95 3e-18
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 90 1e-16
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 89 2e-16
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 88 5e-16
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 87 7e-16
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 87 9e-16
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 86 2e-15
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 86 2e-15
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 86 2e-15
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 85 4e-15
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 84 6e-15
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 83 1e-14
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 83 2e-14
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 81 6e-14
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 80 1e-13
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 2e-13
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 79 2e-13
UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and org... 79 2e-13
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 75 4e-12
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 75 5e-12
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 73 1e-11
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 73 2e-11
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 73 2e-11
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 70 1e-10
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 70 1e-10
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 69 3e-10
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 68 6e-10
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 67 1e-09
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 67 1e-09
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 62 2e-08
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 61 7e-08
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 59 3e-07
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 55 5e-06
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 54 6e-06
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 53 1e-05
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 53 2e-05
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 51 7e-05
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 51 7e-05
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 50 2e-04
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Protothe... 48 5e-04
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 47 0.001
UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-P... 47 0.001
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 47 0.001
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 45 0.005
UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE454... 43 0.015
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.020
UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial... 42 0.026
UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288, w... 42 0.034
UniRef50_Q37082 Cluster: Uncharacterized protein ycf72; n=12; Sp... 42 0.034
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 42 0.045
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.045
UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga br... 42 0.045
UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.060
UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome s... 41 0.079
UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2, mitoch... 40 0.10
UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response regul... 38 0.42
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.42
UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma j... 38 0.56
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 37 0.97
UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;... 37 1.3
UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2; ... 37 1.3
UniRef50_Q02CU7 Cluster: Tetratricopeptide TPR_2 repeat protein;... 35 5.2
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 6.8
UniRef50_Q2HG61 Cluster: Putative uncharacterized protein; n=1; ... 34 6.8
UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep: P... 34 9.0
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 456 bits (1124), Expect = e-127
Identities = 209/240 (87%), Positives = 225/240 (93%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 260
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 261 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 440
VHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKT 120
Query: 441 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 620
GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPIL 180
Query: 621 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 800
KAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 181 KAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 423 bits (1041), Expect = e-117
Identities = 192/240 (80%), Positives = 214/240 (89%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 260
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 261 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 440
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 441 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 620
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 621 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 800
KAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 354 bits (871), Expect = 2e-96
Identities = 170/240 (70%), Positives = 192/240 (80%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 260
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 261 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 440
V FRDPYK+K R E FIA EG+YTGQF+Y C + +
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMYTGQFIY------------------------CGKKANL 96
Query: 441 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 620
RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAGGGRIDKP+L
Sbjct: 97 QIRGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPML 156
Query: 621 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 800
KAGRAYHKYK KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTV+R TSAGRKVGLIAA
Sbjct: 157 KAGRAYHKYKAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVRRDTSAGRKVGLIAA 216
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 210 bits (514), Expect = 4e-53
Identities = 115/241 (47%), Positives = 149/241 (61%), Gaps = 1/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 257
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 258 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
V D +F L A EG+Y GQ + G A E GN++P+G +PEGT V N+E +
Sbjct: 57 RVVREDGVEF-----LMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELR 111
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
GD G+LAR +G++A V+G +T ++LPSG K +P+ +R +GI AG GRI+KPI
Sbjct: 112 PGDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPI 169
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 797
+KAG AYHK+KVK WP VRGVAMN V+HP GGG HQH G+ STV R GRKVG IA
Sbjct: 170 MKAGFAYHKWKVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIA 229
Query: 798 A 800
A
Sbjct: 230 A 230
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 204 bits (498), Expect = 4e-51
Identities = 103/241 (42%), Positives = 145/241 (60%), Gaps = 1/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 257
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 258 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
V F D + L + PEG G + CG A ++ GN +P+ +PEG + N+E +
Sbjct: 61 RVRFEDG-----EERLILVPEGTKVGDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQ 115
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
GD G+ ARA G +AT+I H D RT V+LPSG + R +G+++GGG+ +KP
Sbjct: 116 PGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPF 173
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 797
+KAG+ Y+ + K WP VRGVAMN V+HP GGGNHQ GK +T+ RG GRKVG IA
Sbjct: 174 VKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKVGHIA 233
Query: 798 A 800
A
Sbjct: 234 A 234
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 202 bits (492), Expect = 2e-50
Identities = 102/240 (42%), Positives = 143/240 (59%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 260
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 261 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 440
+ F FK EL+IA E LY + + CG +A GNV+P+ +P G VCN+EEK
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKE 146
Query: 441 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 620
GD G+LAR++G F V+ H+ T++KLPS K+L S R +G+VAGGG+ +KP+L
Sbjct: 147 GDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKYEKPLL 206
Query: 621 KAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 800
KAG+ Y+K+K +P V+ + HPHGGGNHQHIG STV R + G+KVGLIAA
Sbjct: 207 KAGKNYYKFKSLNKKYPIVKIFYLGKENHPHGGGNHQHIGHPSTVSRRSPPGQKVGLIAA 266
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 198 bits (484), Expect = 2e-49
Identities = 108/241 (44%), Positives = 146/241 (60%), Gaps = 1/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 257
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 258 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
++ D KF + +GL GQ + GK A + GN++ VG +PEGTI+ N+E+
Sbjct: 56 LIKLDDGTKFYVP-----SVQGLVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKT 110
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
GD G+ AR++G + V+G D + VKL S + S+ R +VG+VAGGG +KP+
Sbjct: 111 RGDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPL 168
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 797
LKAG Y KYKVK WP+VRGVAMN V HPHGGG HQ + + STV R GRKVG IA
Sbjct: 169 LKAGNNYWKYKVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIA 228
Query: 798 A 800
A
Sbjct: 229 A 229
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 194 bits (474), Expect = 3e-48
Identities = 107/241 (44%), Positives = 145/241 (60%), Gaps = 1/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 257
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 258 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
+ + +F A EGLY GQ V GK A+ + GN+M +G +PEGT++ N+E++
Sbjct: 57 KIVTENGVEFFN-----YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKR 111
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
GD G+ ARA G +A VIG P+ +T ++LPSG + S R VGIVAGGGRI+KP
Sbjct: 112 AGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPF 171
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 797
LKAG+ YH+ + K +P VRG AM+P HPHGGG+HQ G + V + G+KVG I
Sbjct: 172 LKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPGQKVGFIG 229
Query: 798 A 800
+
Sbjct: 230 S 230
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 191 bits (466), Expect = 3e-47
Identities = 105/241 (43%), Positives = 143/241 (59%), Gaps = 1/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 260
MG+ + +Q +G G+ K LR + + ++G V I HDP R AP+A
Sbjct: 1 MGKRLISQNRGRGTP-TYRAPSHKYKADLRH-PRVDENSSLRGEVVGIEHDPARSAPIAK 58
Query: 261 VHFRDPYKFKTRKELFI-APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
V F+ +ELF+ A EG+ G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 59 V------AFENGEELFLLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
D G+ R+SG +ATV+ H +A RT V +PSG K L R +VGIVAG GR+D+P
Sbjct: 113 PNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPW 170
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 797
LKAG+ YHK K + +P V VAMNP +HP GGG +H GK +TV R GRKVGLIA
Sbjct: 171 LKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLIA 230
Query: 798 A 800
A
Sbjct: 231 A 231
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 185 bits (450), Expect = 2e-45
Identities = 103/241 (42%), Positives = 143/241 (59%), Gaps = 1/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAP-KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 257
MG+ +R QR G G+ + + AP + S + + +G V ++ HDPGR PLA
Sbjct: 1 MGKRLRVQRHGRGTPQWRNRGHLRVAPGRYPSPEVLKLDETYEGYVVELKHDPGRWVPLA 60
Query: 258 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
+ + F A EG+YTGQ V G A GN++P+ A+PEGT + N+E +
Sbjct: 61 HIVIPNVADF-----WIPAAEGMYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIR 115
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
GD G+LAR+ G +A ++G + ++ ++LPSG K + + R +GI AG GR +KP+
Sbjct: 116 PGDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPL 173
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 797
LKAG AY+K+K K WP VRGVAMN V HPHGGGNHQ G +TV R G+KVG IA
Sbjct: 174 LKAGNAYYKWKAKAKKWPVVRGVAMNAVNHPHGGGNHQSPGYPTTVARNAPPGQKVGHIA 233
Query: 798 A 800
A
Sbjct: 234 A 234
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 182 bits (443), Expect = 2e-44
Identities = 93/222 (41%), Positives = 139/222 (62%), Gaps = 2/222 (0%)
Frame = +3
Query: 141 KKRKGAPKLR-SLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAP 317
KK++ P ++ L Y +G V DI+H+ RGAP+A++ F++ + A
Sbjct: 12 KKKQRQPIVKVCLSYPIIPQVEEGEVIDIVHERSRGAPVAIISFKED------DCMVPAS 65
Query: 318 EGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGH 497
EG+YTGQ + G A +++GN+ + +PEG V ++E GD G A +G+++ V+ H
Sbjct: 66 EGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNH 125
Query: 498 NPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYV 677
+ T +K+PSG K + S R +VG+VAGGG DKP+LKA A++K K + + +P V
Sbjct: 126 RKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRV 185
Query: 678 RGVAMNPVEHPHGGGNHQHIGKASTV-KRGTSAGRKVGLIAA 800
RGVAMNPVEH HGGGNHQH+GK +TV K+ S +K+GL+ A
Sbjct: 186 RGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLVGA 227
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 169 bits (411), Expect = 1e-40
Identities = 74/114 (64%), Positives = 93/114 (81%)
Frame = +3
Query: 204 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNV 383
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EGLY+GQ++YCG KA+L +GNV
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLYSGQYIYCGSKASLHIGNV 92
Query: 384 MPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 545
+P+G PEGT+VCN+E K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 93 LPIGQCPEGTVVCNVESKPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 169 bits (410), Expect = 2e-40
Identities = 95/242 (39%), Positives = 131/242 (54%), Gaps = 2/242 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 254
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 255 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 434
A V F D A G G+ + G K+ +E GNV+ + +P+GTIVCN+E+
Sbjct: 58 AKVRFEDG-----SVSFVPAVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
Query: 435 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKP 614
GD G + +++G ATV H + VKLPSG L NR M+G +AGGG ++P
Sbjct: 113 HFGDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTLAGGGASERP 170
Query: 615 ILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 794
+ AG + +K K +P VRGVA HPHGGG HQH+G++STV R T G KVG I
Sbjct: 171 FMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPGAKVGSI 230
Query: 795 AA 800
AA
Sbjct: 231 AA 232
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 161 bits (390), Expect = 5e-38
Identities = 101/241 (41%), Positives = 132/241 (54%), Gaps = 2/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 260
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL-- 51
Query: 261 VHFRDPYKFKTRKELF-IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
+ D T K+++ IA G Y GQ + G T+ G + +P+G+ V N+E
Sbjct: 52 LELVD----STGKKVYQIAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESS 107
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
GD G R++G FA V+ H R +KLPSG+ + R VG+VA G ID PI
Sbjct: 108 PGDGGEFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPI 164
Query: 618 LKAGRAYHKYKVKRNCWPY-VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 794
LKAG H + K PY VRGVAMN V HPHGGGNHQH+G+ STV R GRKVG +
Sbjct: 165 LKAGTHVHYLRSKAKR-PYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVGRL 223
Query: 795 A 797
+
Sbjct: 224 S 224
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 159 bits (387), Expect = 1e-37
Identities = 91/241 (37%), Positives = 130/241 (53%), Gaps = 1/241 (0%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 257
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 258 VVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEK 437
+ F D L G G + G K+ + GNV+ V +P+GT VCN+E+
Sbjct: 58 KIRFEDGIVSYVPAVL-----GTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKH 112
Query: 438 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
GD G + +++G ATV H +KLPSG L NR MVG +AGGG ++P
Sbjct: 113 YGDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTLAGGGVSERPF 170
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 797
+ AG + +++ K +P VRGVA HPHGGG HQH+G++STV R G KVG IA
Sbjct: 171 MSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPPGAKVGSIA 230
Query: 798 A 800
A
Sbjct: 231 A 231
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 157 bits (381), Expect = 6e-37
Identities = 94/242 (38%), Positives = 133/242 (54%), Gaps = 2/242 (0%)
Frame = +3
Query: 81 MGRV-IRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 254
MG+V + QR+G GS F S T + G K+ + D G + ++KD IH APL
Sbjct: 1 MGKVRLLVQRRGRGSPTFRSPTHRAAGKVKIPTFDGDLVKGKVVALIKDSIHY----APL 56
Query: 255 AVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEE 434
VV + + + L AP G+ G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 57 MVVKWENG-----AQSLLPAPLGISVGDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLEN 111
Query: 435 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKP 614
GD G+L RASG+FA ++ D + V+LPSG K L ++ R ++G++AGGGR +KP
Sbjct: 112 NPGDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKP 169
Query: 615 ILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 794
+KAG Y+ + WP V GV N +HP GG H + K TV + GRKVG I
Sbjct: 170 FVKAGNKYYWASSRNRHWPVVNGVKKNASDHPFGGKRHSNHSKPFTVSKWAPPGRKVGYI 229
Query: 795 AA 800
A
Sbjct: 230 GA 231
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 155 bits (377), Expect = 2e-36
Identities = 75/123 (60%), Positives = 90/123 (73%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 260
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 261 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 440
V FR P++FK +KELF+ E +YCGKKATL VGNV+P+ ++PEG + +
Sbjct: 61 VTFRHPFRFKKQKELFVXXEVCTPVSSLYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHV 120
Query: 441 GDR 449
G R
Sbjct: 121 GYR 123
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 9e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +3
Query: 93 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 272
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 273 DPYKFKTRK 299
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 106 bits (255), Expect = 1e-21
Identities = 69/207 (33%), Positives = 104/207 (50%), Gaps = 2/207 (0%)
Frame = +3
Query: 108 KGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPY 281
KG + + + R G K R +D+ I G + I +DP R A + ++H+ D
Sbjct: 39 KGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDG- 97
Query: 282 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 461
K + P G G + G + +++GN +P+ MP GT + N+E +G G+LA
Sbjct: 98 ----EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLA 153
Query: 462 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 641
RA+G A +I + K +KLPSG +++ + VG V G K + GRA
Sbjct: 154 RAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSL---GRAGS 208
Query: 642 KYKVKRNCWPYVRGVAMNPVEHPHGGG 722
K + + P VRGV MNPV+HPHGGG
Sbjct: 209 KCWLGKR--PVVRGVVMNPVDHPHGGG 233
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 105 bits (253), Expect = 2e-21
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 3/211 (1%)
Frame = +3
Query: 99 AQRKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 272
A R G + V H R G K R +D+ + VK I +DP R A +A++ +
Sbjct: 41 AGRNSYGHITVRH---RGGGHKQQYRLVDFKRIKDEVPATVKAIEYDPNRTANIALLVYA 97
Query: 273 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 452
D K +AP+GL G V G +A ++VGN +P+ +P GT++ N+E K G G
Sbjct: 98 DGVK-----SYILAPKGLEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGG 152
Query: 453 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 632
+LAR++G A ++G + K V+L SG +++ ++R +G V G ++ +G+
Sbjct: 153 QLARSAGTSAQLLG--KEGKYAIVRLSSGEVRLVLLTSRATIGTV---GNEQHELINSGK 207
Query: 633 AYH-KYKVKRNCWPYVRGVAMNPVEHPHGGG 722
A +++ KR P VRG MNP +HPHGGG
Sbjct: 208 AGRTRWQGKR---PTVRGSVMNPNDHPHGGG 235
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 105 bits (253), Expect = 2e-21
Identities = 65/191 (34%), Positives = 105/191 (54%)
Frame = +3
Query: 168 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 347
R +D+ R + G V+ + +DP R A +A++ + D +AP+ L G V
Sbjct: 63 RFIDFKRRKLDVVGTVERLEYDPNRTAFIALIRYTDG-----ELAYILAPQRLAVGDQVV 117
Query: 348 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 527
G ++ GN MP+ +MP GTI+ N+E G G++AR++G +A ++G D ++
Sbjct: 118 AGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIARSAGTYAQLVGR--DQGMAILR 175
Query: 528 LPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEH 707
L SG ++++ + VG V+ + KAGR+ ++ KR P+VRGVAMNPV+H
Sbjct: 176 LNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV--WRGKR---PHVRGVAMNPVDH 230
Query: 708 PHGGGNHQHIG 740
PHGGG + G
Sbjct: 231 PHGGGEGRTSG 241
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 100 bits (239), Expect = 9e-20
Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 11/227 (4%)
Frame = +3
Query: 96 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 272
+ + + G++ H + G KL R +D+ + V I +DP R A + ++H+
Sbjct: 56 KGRSRQRGNITARH--RGGGHKKLYRIIDFKRDKSLVPAKVVSIEYDPFRSARICLLHYA 113
Query: 273 DPYKFKTRKELFIAPEGLYTGQFVY--------CGKKAT-LEVGNVMPVGAMPEGTIVCN 425
D K I PEGL G V GK ++ GN MP+ +PEGTIV N
Sbjct: 114 DG-----EKRYIIWPEGLKVGDTVMSISWEDAEAGKPLPEIKPGNAMPLKYIPEGTIVHN 168
Query: 426 LEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRI 605
+E G G++ARA+G +A V+G + V++PSG +++ VG V G
Sbjct: 169 IEFIPGKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV---GLA 225
Query: 606 DKPILKAGRAYHKYKVKRNCW-PYVRGVAMNPVEHPHGGGNHQHIGK 743
+ ++K G+A + + W P+ RG AMNPV+HPHGGG + GK
Sbjct: 226 EHELVKLGKA---GRARWLGWRPHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 98.3 bits (234), Expect = 4e-19
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 1/221 (0%)
Frame = +3
Query: 96 RAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 275
+A R G + H K K R +D+ + G + I +DP R A + +V++ D
Sbjct: 41 KAGRNNRGLITTRH-KGGGHKQKYRIIDFKRNKRDVVGTIATIEYDPNRNAFICLVNYLD 99
Query: 276 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGR 455
K R LF +G+ G + + A ++VGN P+ +PEGT++ N+E K G G+
Sbjct: 100 GEK---RYILFA--KGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQ 154
Query: 456 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 635
+AR++G ++G + D K ++L SG + + + +G V G + ++ G+A
Sbjct: 155 MARSAGTSVQILGKDDDGKYVTLRLTSGEVRKVLADCYATIGEV---GNEEYNLVNWGKA 211
Query: 636 YHKYKVKRNCWPYVRGVAMNPVEHPHGGG-NHQHIGKASTV 755
R P VRG MNP +HPHGGG IG+ S V
Sbjct: 212 GRNR--WRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV 250
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 95.5 bits (227), Expect = 3e-18
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 2/208 (0%)
Frame = +3
Query: 105 RKGAGSVFVSHTKKRKGAPKLRSLDYAERH-GYIKGVVKDIIHDPGRGAPLAVVHFRDPY 281
R G + V H R K R +D+ H I+ VK I +DP R ++++ + +
Sbjct: 47 RNNQGKITVRHQGGRNKR-KYRIIDFKRTHYDNIEATVKSIEYDPNRSCFVSLITYANG- 104
Query: 282 KFKTRKELFIAPEGLYTGQFVYCGKKAT-LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 458
K I+P+G+ G + + ++ G MP+ +PEGT V N+E G++
Sbjct: 105 ----AKSYIISPDGIKVGDKILASEHPIDIKPGFSMPLAFIPEGTQVHNIELHPKGGGQI 160
Query: 459 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 638
AR++G++A ++G + K ++L SG + R VG+V+ I KAGR
Sbjct: 161 ARSAGSYARILGQDETGKYVILQLLSGETRKFLKECRATVGVVSNLDHNLVVIGKAGRNR 220
Query: 639 HKYKVKRNCWPYVRGVAMNPVEHPHGGG 722
H R P VRG AMNP +HPHGGG
Sbjct: 221 H-----RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 90.2 bits (214), Expect = 1e-16
Identities = 51/128 (39%), Positives = 74/128 (57%)
Frame = +3
Query: 372 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 551
VGN +P+ +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 359 VGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKL 418
Query: 552 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 731
+ S R +GIV+ + KAG++ ++ +R P VRGVAMNPV+HPHGGG +
Sbjct: 419 IDSRCRATIGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGR 473
Query: 732 HIGKASTV 755
G +V
Sbjct: 474 TKGGRPSV 481
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 89.4 bits (212), Expect = 2e-16
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 1/150 (0%)
Frame = +3
Query: 309 IAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATV 488
+A L G FV G + GN +P+ ++P GT+V N+E G G++ RA+G A +
Sbjct: 199 LASHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVRAAGTSAQL 258
Query: 489 I-GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNC 665
I HN K ++LPSG K P +GIV+ + + KAG + ++ +R
Sbjct: 259 IKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHFNTDLKKAGAS--RWLGRR-- 311
Query: 666 WPYVRGVAMNPVEHPHGGGNHQHIGKASTV 755
P VRGVAMNP++HPHGGG + G +V
Sbjct: 312 -PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 87.8 bits (208), Expect = 5e-16
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 2/203 (0%)
Frame = +3
Query: 138 TKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFI 311
T+ + G K R +D+ I V+ I +DP R A +A+V +RD + +
Sbjct: 57 TRHKGGGHKQFYRIVDFKRDKIDIPARVERIEYDPNRTAYIALVLYRDG-----ERRYIV 111
Query: 312 APEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 491
AP GL G + G+ A ++VGN +P+ +P GT+V +E K G + AR++G ++
Sbjct: 112 APAGLSAGSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYARSAGTSIQLV 171
Query: 492 GHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWP 671
+ + +++ SG + + + + +G V+ + KAG + R P
Sbjct: 172 A--KEGEYATLRMRSGEMRKVLADCKATIGEVSNNEHNLVSLGKAGASRW-----RGVRP 224
Query: 672 YVRGVAMNPVEHPHGGGNHQHIG 740
VRGVAMNPV+HPHGGG + G
Sbjct: 225 TVRGVAMNPVDHPHGGGEGRTSG 247
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 87.4 bits (207), Expect = 7e-16
Identities = 54/144 (37%), Positives = 84/144 (58%), Gaps = 3/144 (2%)
Frame = +3
Query: 369 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 548
+VGN +P+ + GT V ++E G +LARA+G +A +I A + V+LPSG +K
Sbjct: 359 KVGNSIPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEK 416
Query: 549 VLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNH 728
++ S R +GIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 417 LIDSRCRATIGIVSNPNHGARKLRKAGQS--RWSGRR---PIVRGVAMNPVDHPHGGGEG 471
Query: 729 QHIGKASTVK---RGTSAGRKVGL 791
+ G +V + T AG + G+
Sbjct: 472 RTKGGRPSVSPWGKPTKAGFRAGV 495
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 87.0 bits (206), Expect = 9e-16
Identities = 74/235 (31%), Positives = 108/235 (45%), Gaps = 23/235 (9%)
Frame = +3
Query: 105 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 278
R +G V V H R G K +R +D+A R VV+ I HDPGR A +A+V ++
Sbjct: 108 RNNSGRVTVRH---RGGGHKRRIRMVDFA-RDAPGPHVVERIEHDPGRSAHIALVRSQET 163
Query: 279 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEV---------------------GNVMPVG 395
K +A EG+ G V+ E GN +P+
Sbjct: 164 KKLS----YILAAEGMRAGDVVHSYMSGIPEELWKSMGGTVDPGVLAARTAWRGNCLPLH 219
Query: 396 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGM 575
MP GT+V N+ + G G+L R++G FATVI ++ ++L SG +++
Sbjct: 220 MMPVGTLVFNVGLRPGQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCAT 279
Query: 576 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 740
VG+ + + + KAGR+ N P VRG+AMN EHPHGGG + G
Sbjct: 280 VGVASNPNHQYRQLGKAGRSRW-----LNIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 86.2 bits (204), Expect = 2e-15
Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 3/147 (2%)
Frame = +3
Query: 369 EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKK 548
+VGN +P+ GT V N+E + G G++ RA+G +A V+ P AK ++LPSGA+K
Sbjct: 295 KVGNCIPLANARIGTWVHNIECRPGQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEK 352
Query: 549 VLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNH 728
+ S +GIV+ + + KAG + ++ +R P VRGVAMNPV+HPHGGG
Sbjct: 353 AVDSRCHATIGIVSNPSHGTRKLRKAGHS--RWLGRR---PVVRGVAMNPVDHPHGGGEG 407
Query: 729 QHIGKASTVK---RGTSAGRKVGLIAA 800
+ G +V + T AG + +A+
Sbjct: 408 RTKGGRPSVSPWGKPTKAGYRSPSVAS 434
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 86.2 bits (204), Expect = 2e-15
Identities = 66/209 (31%), Positives = 97/209 (46%), Gaps = 3/209 (1%)
Frame = +3
Query: 105 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 278
R+G + + ++ R G K R +D + G + + +DP R A ++ VH D
Sbjct: 40 RRGRNNRGIVTSRHRGGGHKRPYRHIDPRRSKRGVPGRIITVEYDPNRSAYISPVHHGDG 99
Query: 279 YKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRL 458
K PEG+ G + G A VGN P MP GT++ +E G G+
Sbjct: 100 -----DKGYISHPEGIRVGDAIPTGPGAPTTVGNAPPPTHMPLGTVMHGIEVAPGKGGQS 154
Query: 459 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 638
ARA+G A + + +R LP G + +P + +VG G +D +G+A
Sbjct: 155 ARAAGAPAKPVAKEGQSATSR--LPPGEVRSIPQNRPAVVG---QAGNVDSKNRASGKAG 209
Query: 639 HK-YKVKRNCWPYVRGVAMNPVEHPHGGG 722
K + R P VRGV MNPV+HPHGGG
Sbjct: 210 SKRWPGSR---PRVRGVVMNPVDHPHGGG 235
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 85.8 bits (203), Expect = 2e-15
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 11/230 (4%)
Frame = +3
Query: 99 AQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF-- 269
A R G + + H + A +L R +D+ +R+ + G V+ I +DP R + +A+V +
Sbjct: 23 AGRNSTGRITLFH--RGSHAKRLQRRIDF-QRNTSLTGKVERIEYDPNRSSWIALVRWYS 79
Query: 270 --RDPYK--FKTRKELFIAPEGLYTGQFVYCGKKA--TLE--VGNVMPVGAMPEGTIVCN 425
P TR +A + TG V + LE +GN + + +P GT++ N
Sbjct: 80 GSTQPQHQTASTRFTYILACDKFKTGSPVMNNVHSFGNLEQALGNCVQLAYIPVGTLIHN 139
Query: 426 LEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRI 605
+E G + RA+G FA +I + R++LPSGA + S R +GIV+
Sbjct: 140 IEWNPGQGAKFVRAAGTFAQLIQKHEAT--VRLRLPSGALASINSQCRATIGIVSNENHG 197
Query: 606 DKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 755
+ KAG++ ++ +R P VRGVAMNPV+HPHGGG + G +V
Sbjct: 198 KRNFRKAGQS--RWLGRR---PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 85.0 bits (201), Expect = 4e-15
Identities = 51/128 (39%), Positives = 74/128 (57%)
Frame = +3
Query: 372 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 551
VGN + + +P GT V N+E G +L RA+G FA +I + + V+LPSG K+
Sbjct: 321 VGNCVSLANIPIGTWVHNIEWNPGQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKL 380
Query: 552 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 731
+ S R VGIV+ + + KAG++ ++ +R P VRGVAMNPV+HPHGGG +
Sbjct: 381 IDSRCRATVGIVSNLHHGKRKLDKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGR 435
Query: 732 HIGKASTV 755
G +V
Sbjct: 436 TKGGRPSV 443
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 84.2 bits (199), Expect = 6e-15
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 1/212 (0%)
Frame = +3
Query: 108 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKF 287
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDG--- 73
Query: 288 KTRKELFIAPEGLYTGQFVYCG-KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 464
K I L FV K +L GN + + GT++ +E G +R
Sbjct: 74 --EKRYIIKTNNLEISNFVVSSLNKISLNSGNSTIIKNINIGTLINCVEIFPKIGGIFSR 131
Query: 465 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHK 644
+SG+ + +I D K +KLPSG KK + + +G + + K + KAG+ ++
Sbjct: 132 SSGSESEIIFK--DNKFGVIKLPSGIKKKISLNCMATIGKICTFN-VKKKLYKAGQ--NR 186
Query: 645 YKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 740
++ R P VRGVAMNPV+HPHGGG + G
Sbjct: 187 WRGIR---PTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 83.4 bits (197), Expect = 1e-14
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = -1
Query: 806 PASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPS 627
PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L+LV+ +
Sbjct: 17 PASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTA 76
Query: 626 SFQNRFVNTSTSSNNTDHASVA*WQNLL 543
QN VN +TSS++TDH+ V +LL
Sbjct: 77 GLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 82.6 bits (195), Expect = 2e-14
Identities = 43/119 (36%), Positives = 69/119 (57%)
Frame = +3
Query: 366 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 545
++ GN +P+ +P G+I+ N+ G RG+L +A+G FA ++ +P+ K+ +KL SG
Sbjct: 212 MQRGNCLPLHMLPVGSIIHNIGLHPGGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEH 271
Query: 546 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 722
+ + + +G+V+ KAGR+ H+ K P VRGVAMN +HPHGGG
Sbjct: 272 RYVHMNCHATLGVVSNKEHQAISWGKAGRSRHRGK-----RPMVRGVAMNAFDHPHGGG 325
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 81.0 bits (191), Expect = 6e-14
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 1/197 (0%)
Frame = +3
Query: 168 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 347
R +DY I G V + +DP R + +A++ + + +APEGL G ++
Sbjct: 44 RLIDYKRYIWNIFGFVHRVEYDPKRNSLIALIVYSNGVM-----SYILAPEGLLVGDCIF 98
Query: 348 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 527
+ L+ GN + +P G + ++E + RA+G++AT+I + K +K
Sbjct: 99 AKENIVLKPGNSTYLQHIPIGLKINSIELSENKGAQFIRAAGSYATII--SKFEKIVILK 156
Query: 528 LPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCW-PYVRGVAMNPVE 704
L SG + + S+ +G ++ I + KAG Y++K W P VRGVAMNPV+
Sbjct: 157 LKSGELRRVHSNCMATIGSISNFQYIYRNFRKAGF----YRLKG--WLPVVRGVAMNPVD 210
Query: 705 HPHGGGNHQHIGKASTV 755
HPHGGG + G +V
Sbjct: 211 HPHGGGQGKTSGGRPSV 227
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 80.2 bits (189), Expect = 1e-13
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Frame = +3
Query: 105 RKGAGSVFVSHTKKRKGA--PKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRD 275
+ G +V+ T +R+G KL R +D+ + V + +DP R A LA++ + +
Sbjct: 39 KTGGRNVYGRITSRRRGGGHKKLYRIIDFRRDLIDVPAEVIALEYDPNRTAHLALLKYEN 98
Query: 276 PYKFKTRKELFIAPEGLYTGQFVYCGKKATLE---VGNVMPVGAMPEGTIVCNLEEKMGD 446
K IAP GL G + KATL GN P+ +P T + +E G
Sbjct: 99 G-----DKRYIIAPLGLKVGAKIVTSNKATLNDYVTGNNYPLSIIPPSTKLHCVELVPGK 153
Query: 447 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 626
+L R +G ++ + ++K+PSG +++ R +G V G +++ + KA
Sbjct: 154 GAQLGRTAGTSIELVA--VENGYAQLKMPSGEIRLVNPKCRATIGEVGNGEHMNRKLGKA 211
Query: 627 GRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 740
GR +++ KR P VRG+ MNPV+HP+GGG + G
Sbjct: 212 GR--NRWLGKR---PRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 2e-13
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 218
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 79.4 bits (187), Expect = 2e-13
Identities = 45/117 (38%), Positives = 67/117 (57%)
Frame = +3
Query: 372 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 551
+G+ MP+G M GTI+ N+E G ++ RA+G A ++ P + +KLPSG K
Sbjct: 14 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKW 72
Query: 552 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 722
+ + R +G V+ K + KAG++ ++ R P VRGVAMNP +HPHGGG
Sbjct: 73 INAKCRATIGTVSNPSHGTKKLYKAGQS--RWLGIR---PKVRGVAMNPCDHPHGGG 124
>UniRef50_Q01G37 Cluster: Ribosomal protein L2, bacterial and
organelle form; n=5; cellular organisms|Rep: Ribosomal
protein L2, bacterial and organelle form - Ostreococcus
tauri
Length = 294
Score = 79.0 bits (186), Expect = 2e-13
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 1/180 (0%)
Frame = +3
Query: 96 RAQRKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 272
R R AG + V H K G +L R +D+ ++G ++ + +DP R A +A+V
Sbjct: 65 RGGRNNAGRITVWH--KGGGHKRLYRVIDFKRDLTGVRGTIRRLEYDPNRSAHIALVD-- 120
Query: 273 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 452
Y+ +AP G G + G ++ ++VGN +P+ +P T + N+E G G
Sbjct: 121 --YEGGNASRYVLAPHGSTPGDALESGPESDIKVGNALPLKNIPLQTTIHNIELVPGRGG 178
Query: 453 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 632
+L R++G+ AT++ D V+LPSG ++++ + +G+++ G ++ I KA R
Sbjct: 179 QLCRSAGSAATLVKKADDGGYCVVRLPSGEQRLVLENCMATIGMLSNRGHQNRNIGKAAR 238
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 74.9 bits (176), Expect = 4e-12
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 4/223 (1%)
Frame = +3
Query: 69 RVVIMGRVIRAQRKGAGSVFVSHTKKRKGA--PKLRSLDYAERHGYIKGVVKDIIHDPGR 242
RVV + R + G + T+ R G ++R +D+ + I V I +DP R
Sbjct: 75 RVVEQLSIRRVKFGGRNNTGRITTRHRGGGHVQRIRLIDFKRQRKDIFSTVLRIEYDPTR 134
Query: 243 GAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVC 422
A +A++ + D + G+ G + A L GN +P+ +P +IV
Sbjct: 135 SAHVALIQYDDGVL-----SYILCAAGVLPGTRLLSSSNAPLLPGNSLPLRHIPVNSIVH 189
Query: 423 NLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGR 602
N+E + G G++AR+ G + TV D ++L S + P +G ++
Sbjct: 190 NVEMRPGAGGQIARSGGVYCTVT--EKDETFATLRLSSTELRKFPLDCWATIGQISNIKH 247
Query: 603 IDKPILKAGRAYHKYKVKRNC-W-PYVRGVAMNPVEHPHGGGN 725
++ + KAG +RN W P VRG+AMN HPHGGGN
Sbjct: 248 NERILKKAG-------TRRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 74.5 bits (175), Expect = 5e-12
Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Frame = +3
Query: 162 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTG-- 335
KL +D+ + + V + +DP R + +VH + + F+ R + +AP+G + G
Sbjct: 34 KLLKIDFFRKPSHNSFKVLNFFYDPNRSCKVIIVH--NVHTFQPR--IVLAPKGAFQGIN 89
Query: 336 QFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKR 515
F + + + +G + G+ V +++ + R++G+ V+ D
Sbjct: 90 LFDFTKENPSNSIGCSQFFHNINVGSYVYSIQSTPNSKMTFIRSAGSQGQVV--KKDHYF 147
Query: 516 TRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMN 695
T VK+PS K S+ R +G V ++KAG + +++ KR P VRGVAMN
Sbjct: 148 TFVKIPSSEVKKFSSNCRACLGQVGNESHFLSSLMKAGES--RWRNKR---PKVRGVAMN 202
Query: 696 PVEHPHGGG 722
PV+HPHGGG
Sbjct: 203 PVDHPHGGG 211
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 73.3 bits (172), Expect = 1e-11
Identities = 41/120 (34%), Positives = 67/120 (55%)
Frame = +3
Query: 363 TLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGA 542
T + GN +P+ +P GTI+ N+ G+ R++G +A V+ P+ K+ V+L SG
Sbjct: 234 TTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGE 293
Query: 543 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 722
+ + +G+V+ ++ + KAGR+ ++ R P VRGVAMN +HPHGGG
Sbjct: 294 HRYVSLEAVATIGVVSNIDHQNRSLGKAGRS--RWLGIR---PTVRGVAMNKCDHPHGGG 348
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 72.9 bits (171), Expect = 2e-11
Identities = 56/191 (29%), Positives = 96/191 (50%)
Frame = +3
Query: 168 RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY 347
R +D+ I G+V+ I +DP R A +A++ + D K K + E + + +
Sbjct: 37 RIIDFKRNKYNILGIVESIHYDPNRNAKIALIKYLDGDK----KYIIKTNELEVSDKIIS 92
Query: 348 CGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVK 527
L+ GN + + GT++ E +G +R++G+ + +I N + +K
Sbjct: 93 SLNNVILKPGNSTIIKNINVGTLINCFESIPKTKGIFSRSAGSESEIIFKNNNFGI--IK 150
Query: 528 LPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEH 707
L SG KK + + +G + ++K + KAG+ +++K R P VRGVAMNPV+H
Sbjct: 151 LSSGIKKKISINCMATIGKICTFN-LNKKLYKAGQ--NRWKGIR---PTVRGVAMNPVDH 204
Query: 708 PHGGGNHQHIG 740
PHGGG + G
Sbjct: 205 PHGGGEGKTSG 215
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 72.9 bits (171), Expect = 2e-11
Identities = 45/108 (41%), Positives = 61/108 (56%)
Frame = +3
Query: 399 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 578
MP GT + N+E +G G+LARA+G A +I + K +KLPSG +++ + V
Sbjct: 3 MPLGTAIHNIEITLGRGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATV 60
Query: 579 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 722
G V G K + GRA K + + P VRGV MNPV+HPHGGG
Sbjct: 61 GQVGNVGVNQKSL---GRAGSKCWLGKR--PVVRGVVMNPVDHPHGGG 103
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 70.1 bits (164), Expect = 1e-10
Identities = 58/177 (32%), Positives = 89/177 (50%)
Frame = +3
Query: 219 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 398
+II+D R LAV +F K F+ + L G + G KA L++GN +P+
Sbjct: 67 NIIYDSFRRIFLAV-YFIINSIIKNIYRYFLLTKNLKIGSQINFGFKAPLKIGNALPLYK 125
Query: 399 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 578
+ G+ + N+E + +G L + + N +I D T VKLPSG K+L + ++
Sbjct: 126 ILLGSFIYNIEIRYKGKGSLVK-NANHNAIILMIGDIYVT-VKLPSGEIKLLLKNLFCIL 183
Query: 579 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKAS 749
G + +++K I K K ++ P +RG AMN V+HPHGGG GKAS
Sbjct: 184 GQLEIRRKVNKNIKKHAGFNRKLSIR----PKIRGAAMNAVDHPHGGGE----GKAS 232
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 70.1 bits (164), Expect = 1e-10
Identities = 66/230 (28%), Positives = 104/230 (45%), Gaps = 8/230 (3%)
Frame = +3
Query: 105 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP- 278
R G + V H K +G KL R +D+ I VV+ + +DP R + +V++++
Sbjct: 41 RDNQGHITVYH--KERGHKKLYRLVDFYYLKD-IPYVVESLEYDPNRSGFINLVYYKNGI 97
Query: 279 YKFKTRKELFIAPEGLYTGQFVYCGKKAT--LEVGNVMPVGAMPEGTIVCNLEEKMGDRG 452
Y F +A + G C K L+ GN +P G+IV N+ ++
Sbjct: 98 YSF------ILATHNTFIGNVYMCNMKFFDFLKTGNRSLFFNLPIGSIVHNVATTFNEKA 151
Query: 453 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 632
+ R++G F ++ + VKLPS +++ + + G G + K R
Sbjct: 152 KYLRSAGTFGLLL--KKENNMALVKLPSNKN----NNDVFLSCSLFGFGTLGKTSNLMQR 205
Query: 633 AYHKYKVKRNCW----PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 770
+ K R+ W P VRGVAMNPV+HPHGGG + KAS + S
Sbjct: 206 NVNLGKAGRSRWLGIRPTVRGVAMNPVDHPHGGGEGKKSKKASPTNKWAS 255
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 68.5 bits (160), Expect = 3e-10
Identities = 52/185 (28%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Frame = +3
Query: 204 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGK-KATLEVGN 380
+G+V + +DP R + LA + D K IAP + G + ++ L+ G+
Sbjct: 56 QGIVVGLEYDPNRSSFLARIFNPDTKK----NNYIIAPTKIKKGDIIRSNSTRSGLQNGH 111
Query: 381 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 560
+ + G+++ NL G G++ RA G F ++ + R+K SG +
Sbjct: 112 SKTLQNILTGSLIYNLSLSPGKDGKILRAPGAFGRILKRTKTLAKIRLK--SGQYRWFDI 169
Query: 561 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 740
G+V+ + KAG++ ++ +R P VRGVAMNP++HPHGGG + G
Sbjct: 170 KTIATNGVVSNPDSRFTKLQKAGQS--RWLGRR---PTVRGVAMNPIDHPHGGGEGKTSG 224
Query: 741 KASTV 755
S+V
Sbjct: 225 GRSSV 229
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 67.7 bits (158), Expect = 6e-10
Identities = 53/173 (30%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Frame = +3
Query: 204 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVY-CGKKATLEVGN 380
K V+ + +D R A L ++F D K K +++ + Y G + K+ G
Sbjct: 75 KSVIIGVSYDSNRTA-LTSINF-DILKKKFFNDIYT--KDTYIGNIINRIDSKSEFRNGF 130
Query: 381 VMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPS 560
+ + +P GTI+ N+ + + +++GNFA +I D + ++KLPSG P
Sbjct: 131 RLLLKQIPTGTIINNIGNINSKKSKYVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPI 188
Query: 561 SNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 719
++ +G ++ + I KAGR ++ +R P VRGVAMNPV+HPHGG
Sbjct: 189 TSLATIGSISNEQLRNIVIGKAGR--NRNLGRR---PIVRGVAMNPVDHPHGG 236
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 66.9 bits (156), Expect = 1e-09
Identities = 41/122 (33%), Positives = 67/122 (54%)
Frame = +3
Query: 354 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 533
K+ L+VG + +PEG ++ N+E +L+RA+G + +I + K + VKL
Sbjct: 102 KQGILQVGYTTKIKNIPEGILINNIELMENSGSKLSRAAGTSSLIIKQY-NKKYSLVKLS 160
Query: 534 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPH 713
S +++ + +G V+ I+K I K+ +A K + P VRG+AMNPV+HPH
Sbjct: 161 SKECRLISNECYATIGTVSN---IEKKIKKSKKASESRK--KGIRPIVRGLAMNPVDHPH 215
Query: 714 GG 719
GG
Sbjct: 216 GG 217
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 66.9 bits (156), Expect = 1e-09
Identities = 40/119 (33%), Positives = 64/119 (53%)
Frame = +3
Query: 366 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 545
L+ GN +P+ +P G+I+ + R +L RA+G F ++G + + + +KL SG +
Sbjct: 220 LQRGNCLPLRMIPVGSIIHCIGLNSQRRSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQ 279
Query: 546 KVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 722
+ + +G+V+ KAGR +Y KR P VRG+AMN +HPHGGG
Sbjct: 280 RYISLDCHATLGVVSNKEHQLISWGKAGR--RRYLGKR---PVVRGMAMNAKDHPHGGG 333
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 62.5 bits (145), Expect = 2e-08
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Frame = +3
Query: 333 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK 512
G +Y G+ L++GN++P+ +P G+ + N+E + S A +I K
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIEHNPTKGAVFVKNSKISAFLIYIGK--K 166
Query: 513 RTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA-YHKYKVKRNCWPYVRGVA 689
+KLPSG ++L + V + G I LK +A +++ KR P VRGVA
Sbjct: 167 YVTIKLPSGEIRLLNKN----VFCILGELNIIPLFLKKNKAGFNRLLGKR---PKVRGVA 219
Query: 690 MNPVEHPHGGGNHQH-IGKAS 749
MN +HPHGGG ++ IG++S
Sbjct: 220 MNACDHPHGGGEGKNSIGRSS 240
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 60.9 bits (141), Expect = 7e-08
Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 4/120 (3%)
Frame = +3
Query: 375 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDA----KRTRVKLPSGA 542
GN +P+ +P GT + ++ ++ R++G F ++ + + +V+L SG
Sbjct: 303 GNFLPLNLIPIGTTIHSITINPLGPAKMVRSAGTFGQLVAFSGRSGGGDSHAQVRLQSGE 362
Query: 543 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGG 722
+++PS+ +G V+ + + KAGR+ ++ +R P VRGVAMN +HPHGGG
Sbjct: 363 VRLIPSNCCAAIGTVSNKDHQHRRLGKAGRS--RWLGRR---PKVRGVAMNACDHPHGGG 417
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 58.8 bits (136), Expect = 3e-07
Identities = 77/258 (29%), Positives = 113/258 (43%), Gaps = 46/258 (17%)
Frame = +3
Query: 105 RKGAGSVFVSHTKKRKGAPK--LRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDP 278
R G V V H R G K +R +D+A R +V+ I HDPGR A +A+V ++
Sbjct: 107 RNNTGRVTVRH---RGGGHKRRIRIVDFA-RTAPGPHLVERIEHDPGRSAHIALVRSQET 162
Query: 279 YKFK-------------TRKELFIAPEGLYT--GQFVYCGKKA--TLEVGNVMPVGAMPE 407
K + + PE L+ G V G A T GN +P+ +P
Sbjct: 163 QKLSYILAAEGMRAGDVVQSYMSGIPEDLWKSMGGTVDPGVLAARTAWRGNCLPLHMIPV 222
Query: 408 GTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS---GAKKVLPSSNRG-- 572
GT++ N+ + G G+L R++G +ATVI D K ++ + G + P S R
Sbjct: 223 GTLIFNVGLRPGKGGQLCRSAGTYATVISKGSDTKTRANEVETQEDGTEVQKPLSQREKQ 282
Query: 573 ---------MVGIVAGGGR-IDK----PILKAGRAYHKY----KVKRNCW----PYVRGV 686
+ + +G R I K + A H+Y K R+ W P VRG+
Sbjct: 283 KQERIAQHVTIRLQSGEVRLIHKDCCATVGVASNPNHQYRQLGKAGRSRWLNIRPTVRGL 342
Query: 687 AMNPVEHPHGGGNHQHIG 740
AMN +HPHGGG + G
Sbjct: 343 AMNAADHPHGGGRGKSKG 360
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 54.8 bits (126), Expect = 5e-06
Identities = 28/92 (30%), Positives = 55/92 (59%)
Frame = -1
Query: 452 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 273
T++TH + +AHNGTL S R +I+N + L+TI++L V G +E+L L +
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLMLVPEGV 66
Query: 272 AEVYNSQRCTSTRVMDYILNNSLDVSMTFSVI 177
AE +S+ + ++D + +++L+V++ + +
Sbjct: 67 AEGNSSKWGAAIGIVDDLGDHTLEVAIPLAEV 98
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 54.4 bits (125), Expect = 6e-06
Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +3
Query: 462 RASGNFATVIGHNPDAKRTR-VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 638
+ASG+ V+ K + LPSG +K+ + + G G ++ + + AGR+
Sbjct: 131 KASGSVGKVLQRYTWIKNYMLIVLPSGEQKLFLKTQSAVKGANLGNTKLFEKLKMAGRS- 189
Query: 639 HKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 761
++ KR P VRGVAMNP++HPHGGG + G +V +
Sbjct: 190 -RWLSKR---PSVRGVAMNPIDHPHGGGEGKTSGGRPSVSK 226
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 53.2 bits (122), Expect = 1e-05
Identities = 36/88 (40%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +3
Query: 459 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR-GMVGIVAGGGRIDKPILKAGRA 635
+R++G FA +I +++LPSG +LPS N +GIV+ + I KAG+
Sbjct: 156 SRSAGTFAQII--QKTFTEIKLRLPSGKIILLPSKNGFAAIGIVSNLKQNMIVIGKAGK- 212
Query: 636 YHKYKVKRNCWPYVRGVAMNPVEHPHGG 719
++ KR P VRG+AMNPV+HPHGG
Sbjct: 213 -NRLLGKR---PSVRGIAMNPVDHPHGG 236
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 52.8 bits (121), Expect = 2e-05
Identities = 33/116 (28%), Positives = 58/116 (50%)
Frame = +3
Query: 372 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 551
+G+ + + P+ +I NL + A+++G F ++I + +KLP+G KK
Sbjct: 132 LGSFIILNLAPKHSIFSNLISFNKKKSNYAKSAGTFLSIIKKIKEINLFILKLPTGEKKY 191
Query: 552 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 719
++ +G ++K + ++ K R+ VRGVAMNPV+HPHGG
Sbjct: 192 FSGDSKATLG--RNSNFLNKFTVTGKAGINRNKGWRSS---VRGVAMNPVDHPHGG 242
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 50.8 bits (116), Expect = 7e-05
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 522 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAM-NP 698
+ LP +KK + S R M+G +A G + K K +KRN W VRGVAM NP
Sbjct: 382 INLPLDSKKTVLSGCRVMIGQIASSG-----LTK------KLMIKRNMWAKVRGVAMMNP 430
Query: 699 VEHPHGG 719
VEHPHGG
Sbjct: 431 VEHPHGG 437
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 50.8 bits (116), Expect = 7e-05
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Frame = -1
Query: 734 MLMVTTTVRMLYRVHGNTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHASVA*W 555
MLMVTTTV +L RV + +I A ++ +S Q+ V+T+T+SNNT++ SV W
Sbjct: 1 MLMVTTTVEILNRVAMH--HIPLASSY----ASSTTSLQDWLVDTTTASNNTNYGSVGRW 54
Query: 554 QNLLGSRR*LYSCTLSIRIVS--NHSGEVSR 468
QN L +RR L + T +R+ S N +V R
Sbjct: 55 QNFLDTRRQLVTGTHVLRLASCQNDQSQVVR 85
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 49.6 bits (113), Expect = 2e-04
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 26/155 (16%)
Frame = +3
Query: 354 KKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI-------------- 491
+ TL+ GNV+P+ +P G V N+ + R +L R++G F V+
Sbjct: 290 RTVTLKPGNVLPLYLIPPGMQVHNISLTVDGRMQLCRSAGTFGQVVSHQGSDGRSIGGSD 349
Query: 492 ------GHNPDAKRTR------VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 635
G + + R VKL SG + L +G+V+ + + KAGR
Sbjct: 350 VLTMGGGFDEEGNRVPKKGFVLVKLQSGEVRKLDPGCVATIGVVSNKEHQFRQLGKAGR- 408
Query: 636 YHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 740
+++ +R P+VRG AMN V+H HGGG + G
Sbjct: 409 -NRWLGRR---PHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 48.4 bits (110), Expect = 4e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 300 ELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEG 410
E + E +YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 40 EPIVVAESIYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q5IX18 Cluster: 50S ribosomal protein L2; n=1; Prototheca
wickerhamii|Rep: 50S ribosomal protein L2 - Prototheca
wickerhamii
Length = 218
Score = 48.0 bits (109), Expect = 5e-04
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Frame = +3
Query: 105 RKGAGSVFVSHTKKRKGAPKL-RSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHF---R 272
R AG V H + G +L R +D+ G V+ + +DP R A LA++ R
Sbjct: 102 RNAAGCVTARH--RGGGQRRLYRLVDFVRGAASPAGTVERLEYDPIRSARLALLRLDGAR 159
Query: 273 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMG 443
+ + T +AP G+ G V CG A + G+ +P+ A+P G + N+E + G
Sbjct: 160 EGERSPTSHAYVLAPAGVGPGDRVMCGATAPIVPGSSLPLSAIPVGMPIHNVELRPG 216
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 47.2 bits (107), Expect = 0.001
Identities = 36/147 (24%), Positives = 59/147 (40%)
Frame = +3
Query: 282 KFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 461
K ++ I Y ++ G+ + + GT + N+ + A
Sbjct: 80 KLNNLQKFIILQHNYMINSIYYLTNINNIKTGSYIQLKYCKLGTYIYNISKDYKKGSIFA 139
Query: 462 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 641
R++G FA ++ + +KLPS K + +N +G+ + I AG
Sbjct: 140 RSAGTFAQILSFYKNL--VYIKLPSKQCKYININNFCYIGVNSNIFHNKFKIKNAG---- 193
Query: 642 KYKVKRNCWPYVRGVAMNPVEHPHGGG 722
Y + N P VRG A N +HPHGGG
Sbjct: 194 -YNIYYNIKPKVRGKAKNVCDHPHGGG 219
>UniRef50_Q2LZ31 Cluster: GA20496-PA; n=2; Diptera|Rep: GA20496-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 297
Score = 46.8 bits (106), Expect = 0.001
Identities = 35/109 (32%), Positives = 55/109 (50%)
Frame = +3
Query: 210 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 389
+V +I+HD R A +A+V D K+ E A + L T + + E G+ P
Sbjct: 110 LVVEILHDGCRTAKVALVAVGDELKYILATENMKAGDVLKTSRVIPRIPVRPNE-GDAYP 168
Query: 390 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 536
+GA+P GT + LE+ G + L A+G F T++ D + V+LPS
Sbjct: 169 LGALPVGTRIHCLEKNPGQQCHLIHAAGTFGTILRKFDD--KVVVQLPS 215
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 46.8 bits (106), Expect = 0.001
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +3
Query: 411 TIVCNLEEKMGDRGRLARASGNFATVIGHNP--DAKRTRVKLPSGAKKVLPSSNRGMVGI 584
T+V + + R ARA G+ V N VKLPSG + + + N ++G
Sbjct: 174 TLVSYVPNILNGRPLFARARGSACLVRYRNKLQHLGLIWVKLPSGKYRRVSNGNSVLLGK 233
Query: 585 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 719
+A R + +AG Y V R P VRG+ NPV+HP+GG
Sbjct: 234 IAPKLRSELGNTRAG-----YWVNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 44.8 bits (101), Expect = 0.005
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +3
Query: 522 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 701
+KLPSG K + SN + A +I++P K YK+K P VRG AMN
Sbjct: 154 LKLPSG--KTIRISNSDLASY-AFSDKIEEPKYKTAG----YKIKLGRRPKVRGTAMNAC 206
Query: 702 EHPHGGG 722
+HPHGGG
Sbjct: 207 DHPHGGG 213
>UniRef50_Q8MYY5 Cluster: RE45450p; n=6; Endopterygota|Rep: RE45450p
- Drosophila melanogaster (Fruit fly)
Length = 294
Score = 43.2 bits (97), Expect = 0.015
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = +3
Query: 210 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 389
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 390 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 536
+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.020
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 81 MGRVIRAQRKGAGSVFVSHTKKRK 152
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_Q5T653 Cluster: 39S ribosomal protein L2, mitochondrial
precursor; n=24; Euteleostomi|Rep: 39S ribosomal protein
L2, mitochondrial precursor - Homo sapiens (Human)
Length = 305
Score = 42.3 bits (95), Expect = 0.026
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = +3
Query: 135 HTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 314
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 315 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 479
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 480 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 632
++ ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>UniRef50_A7QZU6 Cluster: Chromosome undetermined scaffold_288,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_288, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 315
Score = 41.9 bits (94), Expect = 0.034
Identities = 24/94 (25%), Positives = 45/94 (47%)
Frame = -1
Query: 578 DHASVA*WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRH 399
+H S + W NLL R L IR+V++ + ++ + TSIT+ +F + GT
Sbjct: 68 NHCSASTWNNLLSPRWELDPAGAIIRVVADDNSSLAGCPGEDTSITNVIFNVTDLGTFGS 127
Query: 398 SSNRHHISNFKSCFLSTINKLACVEPFGSNEELL 297
+ ++ + FL+ N+LA V ++ +
Sbjct: 128 RAQGQNVIGNEGGFLTAANELARVYALSHHDRFI 161
>UniRef50_Q37082 Cluster: Uncharacterized protein ycf72; n=12;
Spermatophyta|Rep: Uncharacterized protein ycf72 - Zea
mays (Maize)
Length = 137
Score = 41.9 bits (94), Expect = 0.034
Identities = 38/109 (34%), Positives = 48/109 (44%)
Frame = -2
Query: 721 PPP*GCSTGFMATPRTYGQQLRLTLYLWYALPAFKIGLSIRPPPATIPTMPLLLDGRTFL 542
PPP G STGF+ TP T G+ + +L ALP P T PT+
Sbjct: 7 PPPWGWSTGFITTPLTTGR--LPSQHLDPALPKL---FWFTPTLPTCPTVAKQFWDTKRT 61
Query: 541 APDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSSRLHTMVPSGIA 395
+PDG+ + L S I+ A P A A P P S L VP GI+
Sbjct: 62 SPDGNLKVANLPS--FAISFATAPAALANCPPLPRVISMLCMAVPKGIS 108
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 41.5 bits (93), Expect = 0.045
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = -1
Query: 452 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWI 273
T +TH + +AHNGTL S R +I+N + L+ +++L V +E+L L +
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLMLVPEGM 78
Query: 272 AE 267
AE
Sbjct: 79 AE 80
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.045
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = +3
Query: 663 CW----PYVRGVAMNPVEHPHGGG 722
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_Q8HIS1 Cluster: Ribosomal protein L29; n=1; Monosiga
brevicollis|Rep: Ribosomal protein L29 - Monosiga
brevicollis
Length = 337
Score = 41.5 bits (93), Expect = 0.045
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Frame = +3
Query: 444 DRGRLARASGNFATVIGHNPDAKRTR--VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 617
+ G +RA+G F+ ++ + + R V+LPS +PS+N +G V+ + K
Sbjct: 223 NNGVYSRAAGTFSILLKNIEENNELRSIVRLPSKKIINIPSNNIASIGKVSN--ELHKYE 280
Query: 618 LKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGG 719
+K ++ R P VRG A NPV+HP GG
Sbjct: 281 IKGKAGTNRLLNNR---PKVRGKAQNPVDHPMGG 311
>UniRef50_Q2HAK3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 382
Score = 41.1 bits (92), Expect = 0.060
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Frame = +3
Query: 375 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPD----------AKRTRV 524
GN +P+ +P GT+V N+ +M R++G +AT+I + K V
Sbjct: 154 GNCLPMHMIPVGTVVYNVGSRMDGGAVFCRSAGTYATIISKEEETRDDGTKVMTGKHVVV 213
Query: 525 KLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMN 695
+L SG + + +G+ + + + KAGR+ N P VRG+AMN
Sbjct: 214 RLQSGEIRKVSKDACATIGVASNIMHQYRQLGKAGRSR-----LLNIRPTVRGLAMN 265
>UniRef50_Q4S2E6 Cluster: Chromosome 17 SCAF14762, whole genome
shotgun sequence; n=2; Eumetazoa|Rep: Chromosome 17
SCAF14762, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 259
Score = 40.7 bits (91), Expect = 0.079
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = +3
Query: 213 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKA-TLEVG 377
V ++ +DP R A +A+V + RK IA E + G + G+ A + G
Sbjct: 111 VVEVRYDPCRSADIALVAGGN------RKRWIIATENMQAGDVIKTSAVIGRMAVSANEG 164
Query: 378 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 557
+ P+GA+P GT+V NLE + G RA+G ++ V+LPS + +
Sbjct: 165 DAYPLGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL--RKVNGTAIVQLPSKQQVQVL 222
Query: 558 SSNRGMVGIVAGGGRIDKPILKAGR 632
+ VG V+ + I KAGR
Sbjct: 223 ETCMVTVGRVSNIDHDKEIIGKAGR 247
>UniRef50_UPI00003617AD Cluster: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2).; n=2;
Deuterostomia|Rep: 39S ribosomal protein L2,
mitochondrial precursor (L2mt) (MRP-L2). - Takifugu
rubripes
Length = 255
Score = 40.3 bits (90), Expect = 0.10
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Frame = +3
Query: 213 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKA-TLEVGNVMP 389
V ++ +DP R A +A+V + ++ E A + + T + G+ A + + G+ P
Sbjct: 77 VVEVRYDPCRSADIALVAGGNRKRWIIATENMQAEDIIKTSAVI--GRMAVSAKEGDAYP 134
Query: 390 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNR 569
+GA+P GT+V NLE + G RA+G ++ V+LPS + + +
Sbjct: 135 LGALPVGTLVNNLEIQPGKGSEYIRAAGTSGVLL--RKVNGTAIVQLPSKQQVQVLETCM 192
Query: 570 GMVGIVAGGGRIDKPILKAGR 632
VG V+ + I KAGR
Sbjct: 193 VTVGRVSNVDHNKEIIGKAGR 213
>UniRef50_A4CJK3 Cluster: Regulatory protein, LuxR:Response
regulator receiver; n=1; Robiginitalea biformata
HTCC2501|Rep: Regulatory protein, LuxR:Response
regulator receiver - Robiginitalea biformata HTCC2501
Length = 536
Score = 38.3 bits (85), Expect = 0.42
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = +3
Query: 447 RGRLARASGNFATVIGHNPDAKRTRVKLPSG-----AKKVLPSSNRGMVGIVAGGGRIDK 611
+G+ A+ + T + D+ LP+ A + L +N G+ + G GR+D
Sbjct: 311 QGKTETATTSIQTALRETHDSYTRMELLPAAIDIWVAGESLQEANEGLKELRDGIGRVDA 370
Query: 612 PILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIG 740
P+LKA AY V+ + G + +EH + NH H+G
Sbjct: 371 PLLKAQAAYASGLVR-----FAEGNLQDALEHLNEALNHIHVG 408
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.42
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +3
Query: 675 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 791
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_Q5DC89 Cluster: SJCHGC02322 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02322 protein - Schistosoma
japonicum (Blood fluke)
Length = 393
Score = 37.9 bits (84), Expect = 0.56
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +3
Query: 375 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVI 491
G+ PVGA+P GT++ E K G R +G+ ATV+
Sbjct: 186 GDAYPVGALPVGTVISQFEIKPGQGALFCRTAGSSATVV 224
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 37.1 bits (82), Expect = 0.97
Identities = 30/89 (33%), Positives = 46/89 (51%)
Frame = +3
Query: 453 RLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 632
RLA A+G + ++ + + +PSG +PS ++G + +K +L G
Sbjct: 162 RLALAAGTYFKILYQSFCKTFYVMTIPSGLIIRVPSEGLAVMGRNSNTQN-NKRVL--GL 218
Query: 633 AYHKYKVKRNCWPYVRGVAMNPVEHPHGG 719
A + N P VRGVAMNPV+HP+GG
Sbjct: 219 AGVNFFNGTN--PRVRGVAMNPVDHPNGG 245
>UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;
Acidovorax sp. JS42|Rep: ApbE family lipoprotein
precursor - Acidovorax sp. (strain JS42)
Length = 362
Score = 36.7 bits (81), Expect = 1.3
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Frame = +3
Query: 366 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAK-RTRVKLPSGA 542
L++G V + + G V E+ G L G+ V+G D R V+ PS
Sbjct: 193 LDLGGVAKLPILQAGLQVL---ERAGVTDALVNGGGD-VLVMGRQHDRPWRVGVRNPSAP 248
Query: 543 KKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPY--VRGVAM--NPVEHP 710
++L G+VA G ++ L+AGR H R WP V GVA+ +E
Sbjct: 249 AQLLGVLELQGRGVVASSGDYERGFLRAGRRLHHVLNPRTGWPTEGVSGVALMAERIEDV 308
Query: 711 HGGG 722
+G G
Sbjct: 309 NGWG 312
>UniRef50_O45110 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 321
Score = 36.7 bits (81), Expect = 1.3
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +3
Query: 375 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 551
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 552 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVK 656
L + VG ++ ID I + + + ++ K
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251
>UniRef50_Q02CU7 Cluster: Tetratricopeptide TPR_2 repeat protein;
n=1; Solibacter usitatus Ellin6076|Rep:
Tetratricopeptide TPR_2 repeat protein - Solibacter
usitatus (strain Ellin6076)
Length = 731
Score = 34.7 bits (76), Expect = 5.2
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 4/108 (3%)
Frame = -2
Query: 646 YLWYALPAFKIGLSIRPPPATIPTMPLLLD----GRTFLAPDGSFTLVRLASGLCPITVA 479
+ W+ L AF G +P T+P + +LLD GR L+ F + AS L V
Sbjct: 172 WYWFTLAAFIAGSMAKPMMVTLPVVLVLLDVWPLGRRALSEKIPFFAISAASALTTFAVQ 231
Query: 478 KFPEARARRPLSPIFSSRLHTMVPSGIAPTGITFPTSRVAFFPQ*TNW 335
A + P+ + +V + + +P + F+P T++
Sbjct: 232 SGAGAVRNLAIFPLGLRIENALVTYVVYAAKMLWPANLAVFYPYPTDF 279
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 6.8
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +3
Query: 669 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 749
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q2HG61 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 734
Score = 34.3 bits (75), Expect = 6.8
Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 3/129 (2%)
Frame = -2
Query: 571 PLLLDGRTFLAPDGSFTLVRLASGLCPITVAKF--PEARARRPLSPIFSSRLHTMVPSGI 398
P DGRTF+ L G C + K P A P SS + PSG
Sbjct: 315 PFCEDGRTFIHQAADSVLEASQKGECAVLTVKVKPPPATTSTPTPSANSS--ESTDPSGP 372
Query: 397 AP-TGITFPTSRVAFFPQ*TNWPV*SPSGAMKSSFLVLNLYGSRKCTTAKGAPLPGSWII 221
P T RV P +++ + P+ A++ +Y R+ A AP +
Sbjct: 373 RPRTRPATQEERVPIPPTISHFVMNLPATAIEFLSSYRGVYAGREALFAAAAPTSTTTTT 432
Query: 220 SLTTPLMYP 194
+ TTP + P
Sbjct: 433 TTTTPALPP 441
>UniRef50_Q9W349 Cluster: Protein lozenge; n=13; Eumetazoa|Rep:
Protein lozenge - Drosophila melanogaster (Fruit fly)
Length = 826
Score = 33.9 bits (74), Expect = 9.0
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 585 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 734
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 918,493,372
Number of Sequences: 1657284
Number of extensions: 20460356
Number of successful extensions: 58209
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 55338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58105
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 129984699639
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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