Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C02
         (1224 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9TQX6 Cluster: Acyl-CoA-binding protein; n=10; Eukaryo...    38   0.70 
UniRef50_Q24D88 Cluster: Putative uncharacterized protein; n=1; ...    37   1.2  
UniRef50_P07108 Cluster: Acyl-CoA-binding protein; n=43; Eumetaz...    36   1.6  
UniRef50_A7SWU2 Cluster: Predicted protein; n=1; Nematostella ve...    36   2.8  
UniRef50_P42281 Cluster: Acyl-CoA-binding protein homolog; n=11;...    34   6.5  

>UniRef50_Q9TQX6 Cluster: Acyl-CoA-binding protein; n=10;
           Eukaryota|Rep: Acyl-CoA-binding protein - Canis
           familiaris (Dog)
          Length = 87

 Score = 37.5 bits (83), Expect = 0.70
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = +2

Query: 83  LXGQAXXDAWHXLAXXSXEDAQKAYIEIVEGLIASIGL 196
           L G+A  DAW+ L   S EDA KAY+  VE L    G+
Sbjct: 50  LRGKAKWDAWNQLKGTSKEDAMKAYVNKVEDLKKKYGI 87


>UniRef50_Q24D88 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2544

 Score = 36.7 bits (81), Expect = 1.2
 Identities = 22/80 (27%), Positives = 42/80 (52%)
 Frame = +2

Query: 245  HYRVYYINTRDFSHHHRASDFXDAIFILHFCLKCXXXKKQIHXDXIKLSCSYINERYFQG 424
            H   YYI ++     +RA +  D +FIL+FCLK    +   H D + ++  ++ E+ F  
Sbjct: 1192 HCLKYYICSK-----YRAKEIIDDLFILNFCLKLYIRELWEHLDSLYINTDFLFEKAFLS 1246

Query: 425  C*SMILKSNEITCVLFEIMF 484
              S +  S E+   +++++F
Sbjct: 1247 LYSNLF-SRELLFRIWDVIF 1265


>UniRef50_P07108 Cluster: Acyl-CoA-binding protein; n=43;
           Eumetazoa|Rep: Acyl-CoA-binding protein - Homo sapiens
           (Human)
          Length = 87

 Score = 36.3 bits (80), Expect = 1.6
 Identities = 18/36 (50%), Positives = 21/36 (58%)
 Frame = +2

Query: 89  GQAXXDAWHXLAXXSXEDAQKAYIEIVEGLIASIGL 196
           G+A  DAW+ L   S EDA KAYI  VE L    G+
Sbjct: 52  GKAKWDAWNELKGTSKEDAMKAYINKVEELKKKYGI 87


>UniRef50_A7SWU2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 393

 Score = 35.5 bits (78), Expect = 2.8
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 89  GQAXXDAWHXLAXXSXEDAQKAYIEIVEGLIASIGLKE 202
           G+A   AW  L   S +DAQ+ YI+ V  L A IG  E
Sbjct: 85  GKAKWTAWSNLGSISKDDAQEQYIKYVNDLAAKIGTSE 122


>UniRef50_P42281 Cluster: Acyl-CoA-binding protein homolog; n=11;
           cellular organisms|Rep: Acyl-CoA-binding protein homolog
           - Drosophila melanogaster (Fruit fly)
          Length = 86

 Score = 34.3 bits (75), Expect = 6.5
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +2

Query: 83  LXGQAXXDAWHXLAXXSXEDAQKAYIEIVEGLIA 184
           L G+A  +AW+     S E AQ+ YI  VEGL+A
Sbjct: 50  LKGKAKWEAWNKQKGKSSEAAQQEYITFVEGLVA 83


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,840,939
Number of Sequences: 1657284
Number of extensions: 7612778
Number of successful extensions: 31796
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31792
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 124011183115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)