Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_C01
         (1217 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_35801| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   4.3  
SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   5.7  

>SB_35801| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 70

 Score = 29.9 bits (64), Expect = 4.3
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -2

Query: 235 ISPDRIPIPVARSTNLNKTVQNRAP 161
           I P R P+ + +STN+N ++ N+AP
Sbjct: 5   IKPSRAPMSINQSTNINLSLTNQAP 29


>SB_30377| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 454

 Score = 29.5 bits (63), Expect = 5.7
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +3

Query: 168 RFWTVLFKLVDRATGIGIRSGLMSEFTKSEWKKVSEGGAMETCHKLYTWVNHTVLMLL 341
           R W  L+K++D    +G RS  +  F K E         +  C  + TWV    + +L
Sbjct: 72  RIWNELYKVLDARDPLGTRSKHIETFIKKEKSHKHLIFILNKCDLVPTWVTQQWVSVL 129


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,409,462
Number of Sequences: 59808
Number of extensions: 664269
Number of successful extensions: 1663
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1663
length of database: 16,821,457
effective HSP length: 84
effective length of database: 11,797,585
effective search space used: 3787024785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)