Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B23
         (1204 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0023 + 11731990-11732185,11732672-11733363                       29   7.3  
04_04_1696 + 35448667-35449641,35449726-35450562,35450667-354510...    29   9.6  

>01_03_0023 + 11731990-11732185,11732672-11733363
          Length = 295

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = -3

Query: 428 IRQTRRFASECQIY*N*IFIYGNMFHVSHGKDMYAR 321
           +   R+F  EC IY    FI+GN   V    ++YAR
Sbjct: 116 VHSLRQFFRECDIYGTIDFIFGNSAVVFQSCNLYAR 151


>04_04_1696 +
           35448667-35449641,35449726-35450562,35450667-35451001,
           35451371-35451497,35451594-35451752,35451872-35453053,
           35453164-35453424,35453513-35453761
          Length = 1374

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 317 QNVHTCPYHVTHGTYFHR*KF 379
           Q +H CP H+ H  YFH  KF
Sbjct: 270 QLLHDCPNHLKHCDYFHIDKF 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,466,750
Number of Sequences: 37544
Number of extensions: 178729
Number of successful extensions: 235
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 235
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3678130032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)