Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B21
         (1273 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1130 - 34319558-34319603,34320236-34320335,34320498-343205...    34   0.27 
05_02_0094 + 6562212-6563399                                           32   1.1  
11_08_0102 - 28354880-28355056,28355159-28355376,28355634-283557...    31   1.9  
08_02_0885 + 22268287-22268988                                         30   3.4  
06_01_0768 + 5742938-5743196,5743291-5744729                           30   4.5  
10_08_0207 - 15822080-15822190,15822886-15822945,15823021-158231...    29   7.8  
02_05_0690 - 30943184-30943305,30944048-30944459,30944549-309446...    29   7.8  

>02_05_1130 -
           34319558-34319603,34320236-34320335,34320498-34320577,
           34320680-34320840,34321602-34321731,34322055-34322230,
           34322873-34323068,34323768-34323889,34324376-34324468,
           34324672-34324740,34325259-34325423,34325771-34326061
          Length = 542

 Score = 33.9 bits (74), Expect = 0.27
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = -2

Query: 555 PSSANPRQLCLVASLNPHGGARIDASLSTSPLEAYKLKAYSSRPHPATCRGTCPVV 388
           PS+ +P      A+ +P GG    A+ S  PL A     +  RP P   RG C VV
Sbjct: 12  PSNPSPSSRSAAAAFSPRGGVHFAAARSGLPL-ACAAPRHRGRPPPRRRRGGCLVV 66


>05_02_0094 + 6562212-6563399
          Length = 395

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = -2

Query: 555 PSSANPRQLCLVASLNPHGGARIDASLSTSPLEAYKLKAYSSRPHPATCRGTCPVVRSEF 376
           PSS  PR+  L   ++ +G AR+       P  A +  A+ + P P T R    ++ +  
Sbjct: 9   PSSLRPREPLLCRVISAYGRARL-------PAAARRAFAHPAFPAPRTARALNTLLHALL 61

Query: 375 PGVEP-PGVLAECRSLGTSHP 316
               P P +L+ECR  G  HP
Sbjct: 62  ACRAPLPELLSECRGSGI-HP 81


>11_08_0102 -
           28354880-28355056,28355159-28355376,28355634-28355712,
           28356451-28356519,28356602-28356681,28356818-28356925,
           28357103-28357169,28357894-28357959,28358042-28358119,
           28358198-28358250,28359542-28359575,28359851-28359865,
           28360082-28360109,28360628-28360716,28361688-28361810,
           28362192-28362296,28362381-28362485,28362924-28363139,
           28364656-28364845,28365193-28365418,28366096-28366162
          Length = 730

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +3

Query: 348 LALPAVQLLETPIVQLDKFLCKSLDVVEKSMPSIYMPPEEMYSETRQYV--LRRADSVTR 521
           L + A  L  T   +++KF+ K+LD  E  +  +Y+ PE++ S++++++  L +     R
Sbjct: 168 LGIQAYMLASTTNKEVEKFVYKALDKGEGELKILYVTPEKI-SKSKRFMSKLEKCHHAGR 226

Query: 522 LGTAVLD 542
           L    +D
Sbjct: 227 LSLIAID 233


>08_02_0885 + 22268287-22268988
          Length = 233

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 676 LKGRRAGPEQPRRCSTEPGSRGSC--RGDSPGKLWPK 780
           +KG+ A P  PRRC    GS  +C  R + P + W K
Sbjct: 51  VKGKTAIPATPRRCRRPDGSNPACKMRWERPPEGWMK 87


>06_01_0768 + 5742938-5743196,5743291-5744729
          Length = 565

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = -3

Query: 323 LTQGHRPTKERVGLPYFEVQFFCHSNTGHDDRYGCNP*DHFKIRHGWLI 177
           L Q  RP      LPY  V    H  T HD  + C+   HF  R  WL+
Sbjct: 249 LVQSDRPATSVSELPYVFVDLD-HGCTYHDKLFYCDDERHFLHRAPWLL 296


>10_08_0207 -
           15822080-15822190,15822886-15822945,15823021-15823181,
           15825573-15825629,15826521-15826584
          Length = 150

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -3

Query: 440 HTLLDHIQRLAEELVQLYDRSFQELNRREC*LNA 339
           H+ LD ++R  EE+ +LY   F+ L R++  +NA
Sbjct: 72  HSELDKLKREVEEMKKLYKELFESLARKDKDVNA 105


>02_05_0690 -
           30943184-30943305,30944048-30944459,30944549-30944610,
           30944724-30944787,30944880-30944947,30945039-30945168,
           30945276-30945341,30945794-30946369
          Length = 499

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 207 VSRVASIPIVVSGIGVTEKLYFKIRESNPLFRWSMSLGEKSLATGIQLALP 359
           V R+  I  V+S +   +K+  +     P FRW  S G+     G+ +A+P
Sbjct: 304 VRRLYDIANVLSSLNFIDKIQ-QADSRKPAFRWLGSAGKPKAENGVTIAVP 353


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,017,979
Number of Sequences: 37544
Number of extensions: 628368
Number of successful extensions: 1921
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1920
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3945842028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)