Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B21
         (1273 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    29   0.086
DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein ...    23   5.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   5.7  
AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein ...    23   5.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   7.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   7.5  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   7.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   7.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   7.5  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   9.9  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 29.1 bits (62), Expect = 0.086
 Identities = 27/90 (30%), Positives = 33/90 (36%), Gaps = 3/90 (3%)
 Frame = -2

Query: 678 QARPPHQRWSRQLRLGCLAGGTCR-RICQRL*AHGRERSRWPPSS--ANPRQLCLVASLN 508
           Q RPPH R  R+  L    G      I Q    H R R    P +   N R + +     
Sbjct: 79  QPRPPHPRLRREAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRP 138

Query: 507 PHGGARIDASLSTSPLEAYKLKAYSSRPHP 418
           PH   R +A L   P        Y S+P P
Sbjct: 139 PHPRLRREAELEAEP--GNNRPVYISQPRP 166


>DQ855483-1|ABH88170.1|  117|Apis mellifera chemosensory protein 2
           protein.
          Length = 117

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 678 EGETGRARAAQAVQHGARFKRKLQRRLTRQALAEA 782
           EG++GR+R +    + A   ++  RR  + AL EA
Sbjct: 25  EGQSGRSRVSDEQLNMALSDQRYLRRQLKCALGEA 59


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 221 IHTDRRVRYWSDRKIVLQ 274
           I  DRR R+ SDR + L+
Sbjct: 335 IQNDRRTRHLSDRVVALE 352


>AJ973398-1|CAJ01445.1|  117|Apis mellifera hypothetical protein
           protein.
          Length = 117

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 678 EGETGRARAAQAVQHGARFKRKLQRRLTRQALAEA 782
           EG++GR+R +    + A   ++  RR  + AL EA
Sbjct: 25  EGQSGRSRVSDEQLNMALSDQRYLRRQLKCALGEA 59


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 287 QPSLSLVYVPG*EVPSDRHSASTPGGSTPGNSDRTT 394
           +P  ++VY PG    + +     P G+T G ++  T
Sbjct: 391 RPMHNVVYRPGENPVTQKREGGPPTGATTGPNEIVT 426


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 287 QPSLSLVYVPG*EVPSDRHSASTPGGSTPGNSDRTT 394
           +P  ++VY PG    + +     P G+T G ++  T
Sbjct: 411 RPMHNVVYRPGENPVTQKREGGPPTGATTGPNEIVT 446


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 287 QPSLSLVYVPG*EVPSDRHSASTPGGSTPGNSDRTT 394
           +P  ++VY PG    + +     P G+T G ++  T
Sbjct: 360 RPMHNVVYRPGENPVTQKREGGPPTGATTGPNEIVT 395


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 224 HTDRRVRYWSDRKIVLQN 277
           H D R+RYW    +V+ +
Sbjct: 275 HNDGRLRYWRTPSVVVSD 292


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = -3

Query: 782 GFGQSLPGESPLQLPLEPGSVLHRLGCSGPARLPFRP 672
           G+G+ LPG + +  P    + +      G   LP  P
Sbjct: 209 GYGRHLPGHAQMGRPSYTTATMATTSTPGSGSLPASP 245


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 58  PSQRTXRIQTPDRAHSLVSVEGGVA 132
           P QR    + PD ++  + V GG A
Sbjct: 55  PCQRVHSSRIPDLSYDFIVVGGGAA 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 299,266
Number of Sequences: 438
Number of extensions: 6524
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43582869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)