Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B19
         (1302 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0366 - 2631738-2632109                                           34   0.28 
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574...    29   8.0  
05_04_0331 + 20317482-20318174,20318518-20318685,20318773-203188...    29   8.0  

>02_01_0366 - 2631738-2632109
          Length = 123

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 19/58 (32%), Positives = 30/58 (51%)
 Frame = -3

Query: 721 RRLVGQMVLMLVRHRLAHLPPLSYRRLENRCLRPLSSVTSYCKSLLSDVRVEPLLCIV 548
           RR  G++ L+L  H    L P+S R +    + PLS+ +S       +  + PLLC+V
Sbjct: 63  RREKGEVALVLSCHHRLRLDPMSPRTVWASSVAPLSASSSAASGPNEEAVMPPLLCLV 120


>07_01_1133 -
           10550799-10551137,10552195-10552254,10555693-10557401,
           10557534-10557616,10577533-10578074
          Length = 910

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 439 EDSAAIVRAKSCLAASRQETVARKAARDL 525
           E+   I++ +SC+A SRQ++ A    RDL
Sbjct: 651 EEKVKIIQERSCIAQSRQKSYADNRHRDL 679


>05_04_0331 +
           20317482-20318174,20318518-20318685,20318773-20318895,
           20319094-20319165,20321217-20321431,20321521-20321593,
           20322092-20322568,20322970-20323077,20323184-20323192,
           20323193-20323552
          Length = 765

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +1

Query: 715 AGDHINSNGTLRTSHDLEEDLP--DRCPNEEIRNLTVDNLVSAAVDYCQGE 861
           AGD  +S      +HD EED    D  P ++ RN+ V + +   V +C+ E
Sbjct: 180 AGDAQDSTTAAGDAHDSEEDFGDYDSTPADKRRNIFVPDRIVNLVIHCEDE 230


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,769,694
Number of Sequences: 37544
Number of extensions: 487587
Number of successful extensions: 1128
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4062238548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)