Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B19
         (1302 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    27   0.91 
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    25   6.4  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    25   6.4  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 27.5 bits (58), Expect = 0.91
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
 Frame = +1

Query: 319 EADKISNFKQALEWLICATEQAHPEARRLLR--RCIRSGVIDEDSAAIVRAKSCLAASRQ 492
           EA+ + + +  L +  C+  +A   + +L R  RC+  G I        R+K CL    Q
Sbjct: 435 EAELVKDRRLELGYTYCSVHEAPKVSGQLTRCFRCLERGHIAATCTGEDRSKRCLRCGDQ 494

Query: 493 ETVARKAARDLFASLSNGEQYI 558
              A     ++   L  G   I
Sbjct: 495 THKASGCTNEVKCMLCGGAHRI 516


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 385 HPEARRLLRRCIRS 426
           HP+A+R  R+C+RS
Sbjct: 322 HPKAQRKARKCVRS 335


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 20/86 (23%), Positives = 34/86 (39%)
 Frame = +1

Query: 313 ELEADKISNFKQALEWLICATEQAHPEARRLLRRCIRSGVIDEDSAAIVRAKSCLAASRQ 492
           E+E  +     QAL+    A EQA  +A++           +ED  A       +AA ++
Sbjct: 349 EVEMQRRGESFQALKDACEADEQAFAKAQKRFEAVSAGLSTNEDGEAATLQDQLIAAKQK 408

Query: 493 ETVARKAARDLFASLSNGEQYITTVQ 570
              A  A +     L + +Q +   Q
Sbjct: 409 SAEATTAIKQSEMELKHSQQLLRDKQ 434


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,029,497
Number of Sequences: 2352
Number of extensions: 18721
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 150010149
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)