Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B19
         (1302 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132949-1|CAB61068.2|  463|Caenorhabditis elegans Hypothetical ...    33   0.44 
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p...    32   1.0  
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr...    32   1.0  
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos...    32   1.0  
Z74028-6|CAI91174.1|  674|Caenorhabditis elegans Hypothetical pr...    31   1.8  
Z74028-5|CAA98427.1|  677|Caenorhabditis elegans Hypothetical pr...    31   1.8  
Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical pr...    31   2.4  

>AL132949-1|CAB61068.2|  463|Caenorhabditis elegans Hypothetical
           protein Y53F4B.1 protein.
          Length = 463

 Score = 33.1 bits (72), Expect = 0.44
 Identities = 14/54 (25%), Positives = 28/54 (51%)
 Frame = +1

Query: 253 EDGCAESQVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRR 414
           ED CA  Q    K    +K ++   K ++  + +EW +  T+++ P  ++LL +
Sbjct: 249 EDDCAVGQRAFLKMYNNKKYDMSGCKSNSICETIEWCLNNTQESRPTFKQLLSK 302


>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
            protein F20G4.3 protein.
          Length = 2003

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 28/107 (26%), Positives = 47/107 (43%)
 Frame = +1

Query: 274  QVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRRCIRSGVIDEDSAA 453
            +V  +KQL++ K  LEA  ++     LE      E+         RR   + + +E  + 
Sbjct: 1028 EVERSKQLVKAKARLEAT-VAEINDELE-----KEKQQRHNAETARRAAETQLREEQESC 1081

Query: 454  IVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 594
            + + +     + Q  + RK +     S+ N E+     QLER IREI
Sbjct: 1082 LEKTRKAEELTNQ--LMRKESELSQISIRNDEELAARQQLEREIREI 1126


>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
            F20G4.3 protein.
          Length = 2003

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 28/107 (26%), Positives = 47/107 (43%)
 Frame = +1

Query: 274  QVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRRCIRSGVIDEDSAA 453
            +V  +KQL++ K  LEA  ++     LE      E+         RR   + + +E  + 
Sbjct: 1028 EVERSKQLVKAKARLEAT-VAEINDELE-----KEKQQRHNAETARRAAETQLREEQESC 1081

Query: 454  IVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 594
            + + +     + Q  + RK +     S+ N E+     QLER IREI
Sbjct: 1082 LEKTRKAEELTNQ--LMRKESELSQISIRNDEELAARQQLEREIREI 1126


>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
            heavy chain II protein.
          Length = 2003

 Score = 31.9 bits (69), Expect = 1.0
 Identities = 28/107 (26%), Positives = 47/107 (43%)
 Frame = +1

Query: 274  QVVLAKQLLEEKCELEADKISNFKQALEWLICATEQAHPEARRLLRRCIRSGVIDEDSAA 453
            +V  +KQL++ K  LEA  ++     LE      E+         RR   + + +E  + 
Sbjct: 1028 EVERSKQLVKAKARLEAT-VAEINDELE-----KEKQQRHNAETARRAAETQLREEQESC 1081

Query: 454  IVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 594
            + + +     + Q  + RK +     S+ N E+     QLER IREI
Sbjct: 1082 LEKTRKAEELTNQ--LMRKESELSQISIRNDEELAARQQLEREIREI 1126


>Z74028-6|CAI91174.1|  674|Caenorhabditis elegans Hypothetical
           protein C14C10.3b protein.
          Length = 674

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 451 AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 594
           A +  K+CL A RQ         D F  L N   +  +VQ +++IRE+
Sbjct: 11  ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58


>Z74028-5|CAA98427.1|  677|Caenorhabditis elegans Hypothetical
           protein C14C10.3a protein.
          Length = 677

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 451 AIVRAKSCLAASRQETVARKAARDLFASLSNGEQYITTVQLERRIREI 594
           A +  K+CL A RQ         D F  L N   +  +VQ +++IRE+
Sbjct: 11  ATILNKTCLTAVRQSLKHTDGRFDYFRYLGNDASHAISVQKDQQIREV 58


>Z81554-1|CAB04506.1|  838|Caenorhabditis elegans Hypothetical
           protein F57G4.1 protein.
          Length = 838

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +1

Query: 811 LTVDNLVSAAVDYCQGELPLVSYELTLTDPXVKSLDHIPLLQQAFXTSN--SFLTSFISQ 984
           LTV+N VS   D C  +  L +Y LT +D    S D  P+L+    T N  S +   I  
Sbjct: 475 LTVENEVSFGFDCCDVDTNLCTYTLTFSDE--MSADQ-PVLESQASTKNDPSIMNKLIDL 531

Query: 985 TTLL 996
           T+ L
Sbjct: 532 TSYL 535


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,263,254
Number of Sequences: 27780
Number of extensions: 424578
Number of successful extensions: 871
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3631930622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)