Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B17
         (1264 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    27   0.30 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    25   1.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    25   1.2  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    24   2.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   2.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.7  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   4.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   4.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 27.1 bits (57), Expect = 0.30
 Identities = 11/38 (28%), Positives = 23/38 (60%)
 Frame = +2

Query: 635 VVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPFIVVM 748
           +VY M   R++  V+F +N++  C++   T L F +++
Sbjct: 263 LVYGMSKSRNIEGVSFGTNLVILCALWITTLLLFTILL 300


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 638 VYVMDTVRSV-SPVTFMSNMLYACSILYKT 724
           +Y M  +  + S VTF+ +++Y C + Y T
Sbjct: 554 LYFMSLLNPILSNVTFVIDVVYVCDVCYST 583


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 25.0 bits (52), Expect = 1.2
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +2

Query: 638 VYVMDTVRSV-SPVTFMSNMLYACSILYKT 724
           +Y M  +  + S VTF+ +++Y C + Y T
Sbjct: 279 LYFMSLLNPILSNVTFVIDVVYVCDVCYST 308


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = -2

Query: 819 ASWKASKSLIHSTAYELFTTSILF---MTTINGSRVLYNIEQAYSMLDINV 676
           A+ K  + ++    Y  F T  L+    +T  G  VL+ ++Q Y +  INV
Sbjct: 75  ATKKLEQFIVRFMKYHFFGTLKLWSQLFSTFAGIEVLHVVKQCYHLQKINV 125


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 551  TPGQIEVFTWSASGTIVTETLASSC 625
            TPG I  F+W+ +  ++T      C
Sbjct: 1032 TPGAILAFSWACNDAVMTSDSIMKC 1056


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 3.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 648  ITYTTTVGQDDASVSVTIVPDA 583
            +T  TT+G+   S  VT+ P A
Sbjct: 1282 VTAATTIGEGQPSKKVTVSPSA 1303


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 251 LIILGMAGAGKTSFTRRLS 307
           L ILG +GAGKT+    L+
Sbjct: 107 LAILGSSGAGKTTLLNTLT 125


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 251 LIILGMAGAGKTSFTRRLS 307
           L ILG +GAGKT+    L+
Sbjct: 107 LAILGSSGAGKTTLLNTLT 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,346
Number of Sequences: 336
Number of extensions: 5682
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 37096721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)