Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B17
(1264 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0781 + 11141469-11141486,11141855-11141978,11142024-111423... 285 7e-77
03_05_0911 + 28697654-28697698,28698170-28698278,28698352-286984... 86 5e-17
03_02_0933 - 12505196-12505286,12505759-12505814,12508780-125088... 43 4e-04
02_04_0215 - 20983210-20983293,20983440-20983512,20984072-209841... 41 0.002
06_02_0083 - 11539955-11540257,11540594-11540742,11540938-115410... 31 1.5
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 31 1.9
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 31 2.5
02_04_0052 + 19271014-19271627,19272055-19272224,19272321-192725... 31 2.5
03_04_0172 + 18017164-18017313,18017389-18017499,18017719-180178... 30 3.4
11_06_0513 + 24466131-24469487 30 4.4
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 29 5.9
08_02_0582 + 18993816-18993890,18994050-18994446,18995645-189957... 29 5.9
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 29 5.9
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 29 5.9
02_01_0077 - 546033-546223,546314-546566,546635-546865,547165-54... 29 5.9
05_03_0162 - 9050981-9051003,9051141-9052273,9052388-9053310,905... 29 7.7
>03_02_0781 +
11141469-11141486,11141855-11141978,11142024-11142340,
11143219-11143509,11143751-11143956,11144048-11144327
Length = 411
Score = 285 bits (698), Expect = 7e-77
Identities = 136/231 (58%), Positives = 172/231 (74%), Gaps = 1/231 (0%)
Frame = +2
Query: 272 GAGKTSFTRRLSSKV-INGSRPYLVNLDPACREVPYPANIDIRDTVDYKEVMKQYGLGPN 448
G GKT+F RL + R Y++NLDPA +P+ ANIDIRDTV YKEVMK+YGLGPN
Sbjct: 78 GTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANIDIRDTVRYKEVMKEYGLGPN 137
Query: 449 GGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIVTETLASSCP 628
GGI+T+LNLFSTKF +V+ +IE+ + Y ++DTPGQIE+FTWSASG I+TE AS+ P
Sbjct: 138 GGILTSLNLFSTKFDEVISVIERRADQLDYVLVDTPGQIEIFTWSASGAIITEAFASTFP 197
Query: 629 TVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPFIVVMNKIDVVNNSYAVEWMRDFEA 808
TVV YV+DT RS SPVTFMSNMLYACSILYKTRLP I+ NK+DV + +A+EWM DFEA
Sbjct: 198 TVVAYVVDTPRSTSPVTFMSNMLYACSILYKTRLPMILTFNKVDVAKHEFALEWMEDFEA 257
Query: 809 FQEALNADGGGETEGGNTYIGNLTQSMALALDSFYSDLKCCGVSAHTGEGI 961
FQ AL++D ++Y T+S++L LD FY +L+ GVSA +G G+
Sbjct: 258 FQTALDSD--------SSYSSTFTRSLSLVLDEFYKNLRSVGVSAVSGAGV 300
>03_05_0911 +
28697654-28697698,28698170-28698278,28698352-28698433,
28698486-28698514,28699472-28699567,28699860-28699963,
28700071-28700201,28700276-28700369,28701666-28701721,
28702728-28702821
Length = 279
Score = 86.2 bits (204), Expect = 5e-17
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 16/194 (8%)
Frame = +2
Query: 254 IILGMAGAGKTSFTRRLSSKVINGSRP-YLVNLDPACREVPYPANIDIRDTVDYKEVMKQ 430
+++G AG+GK+++ L R ++VNLDPA YP + DIR+ + +VM++
Sbjct: 6 LVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEE 65
Query: 431 YGLGPNGGIVTALNLF------STKFGQVVDLIE-------KAGKKHKYCVIDTPGQIEV 571
G+GPNGG++ + L S + D ++ + Y V D PGQIE+
Sbjct: 66 LGMGPNGGLIYCMELLKLLTDPSENHRHLEDNLDDWLDEQLEGYLDDDYLVFDCPGQIEL 125
Query: 572 FTW-SASGTIVTETLASSCPTVVVYVMDTVRSVSPVT-FMSNMLYACSILYKTRLPFIVV 745
FT V + VY++D+ + VS VT ++S + + S + + LP I +
Sbjct: 126 FTHVPVLRNFVEHLKRKNFNVCAVYLLDS-QFVSDVTKYISGCMASLSAMIQLELPHINI 184
Query: 746 MNKIDVVNNSYAVE 787
++K+D+V+N VE
Sbjct: 185 LSKMDLVSNKKDVE 198
>03_02_0933 -
12505196-12505286,12505759-12505814,12508780-12508873,
12508949-12509079,12509187-12509290,12509585-12509680,
12510752-12510860,12511252-12511296
Length = 241
Score = 43.2 bits (97), Expect = 4e-04
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +2
Query: 536 YCVIDTPGQIEVFTW-SASGTIVTETLASSCPTVVVYVMDTVRSVSPVT-FMSNMLYACS 709
Y V D PGQIE+FT V + VY +D+ + VS VT ++S + + S
Sbjct: 77 YLVFDCPGQIELFTHVPVLRNFVEHLKRKNFNVCAVYFLDS-QFVSDVTKYISGCMASLS 135
Query: 710 ILYKTRLPFIVVMNKIDVVNNSYAVE 787
+ + LP I +++K+D+V N VE
Sbjct: 136 AMIQLELPHINILSKMDLVANKKDVE 161
Score = 32.7 bits (71), Expect = 0.63
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 254 IILGMAGAGKTSFTRRLSSKVINGSRP-YLVNLDPACREVPYPANID 391
+++G AG+GK+++ L R ++VNLDPA YP + +
Sbjct: 6 LVIGPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTE 52
>02_04_0215 -
20983210-20983293,20983440-20983512,20984072-20984159,
20984232-20984388,20984472-20984575,20985045-20985119,
20985144-20985213
Length = 216
Score = 40.7 bits (91), Expect = 0.002
Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +2
Query: 452 GIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIVTETLAS--SC 625
G+V ++ + + ++ + H Y + D PGQ+E+F ++ + L +
Sbjct: 24 GLVYCMDYLEKNIDWLEEKLKPLIEDH-YLLFDFPGQVELFFLHSNARSIIYKLIKKLNL 82
Query: 626 PTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPFIVVMNKIDVVNN 772
V+++D P ++S +L + S + LP I V++KID++ N
Sbjct: 83 RLTAVHLIDAHLCCDPGKYVSALLLSLSTMLHMELPHINVLSKIDLIEN 131
>06_02_0083 -
11539955-11540257,11540594-11540742,11540938-11541025,
11541151-11541462,11541554-11541709,11541941-11542156,
11542251-11542508,11542740-11542943,11543052-11543096
Length = 576
Score = 31.5 bits (68), Expect = 1.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 167 KKRYIGEKMSSDTNKPEGSNAEPNKPI 247
+KRYI +++++D P GS PN+P+
Sbjct: 478 QKRYIEQQLNTDHEGPFGSRVSPNRPV 504
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/107 (23%), Positives = 45/107 (42%)
Frame = +2
Query: 440 GPNGGIVTALNLFSTKFGQVVDLIEKAGKKHKYCVIDTPGQIEVFTWSASGTIVTETLAS 619
G GGI + F + ++ E+ + + PG + + T T S
Sbjct: 450 GEAGGITQQIG---ATFFPIENIRERTKELKAGAALHVPGFLVIDTPGHQSFSNLRTRGS 506
Query: 620 SCPTVVVYVMDTVRSVSPVTFMSNMLYACSILYKTRLPFIVVMNKID 760
S + + V+D +R + T S +IL + + FI+V+NK+D
Sbjct: 507 SLCDIAILVVDIMRGIQAQTIES-----LNILKRHKADFIIVLNKVD 548
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 254 IILGMAGAGKTSFTRRLSSKVINGSRP 334
I+LG AG GKT+ L+ K+ NG P
Sbjct: 301 ILLGEAGVGKTAIAEGLAHKIANGDVP 327
>02_04_0052 +
19271014-19271627,19272055-19272224,19272321-19272550,
19272657-19272765,19272858-19272985,19273102-19273203,
19273285-19273566,19273660-19273769,19273851-19274145,
19274242-19274475,19274705-19274935,19275167-19275478
Length = 938
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 254 IILGMAGAGKTSFTRRLSSKVINGSRP-YLV 343
I+LG AG GKT+ L+ ++ NG P YLV
Sbjct: 308 ILLGEAGVGKTAIAEGLALRIANGDVPIYLV 338
>03_04_0172 +
18017164-18017313,18017389-18017499,18017719-18017886,
18017985-18018098,18019070-18019126,18019797-18020475,
18021016-18021174,18021449-18021618
Length = 535
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +2
Query: 275 AGKTSFTRRLSSKVINGSRPYLVN 346
AG+ FT LSS +IN +RP++VN
Sbjct: 47 AGREIFTNFLSSVMINATRPFVVN 70
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 29.9 bits (64), Expect = 4.4
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 251 LIILGMAGAGKTSFTRRL 304
++I+GMAGAGKT TR L
Sbjct: 217 VVIVGMAGAGKTKLTRHL 234
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 167 KKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSFTRRLSSKVINGSRPYLVN 346
K++ G K+ + + E + ILG +GAGK++F L+ ++ GS V
Sbjct: 110 KQKKEGVKVKKEVYLLNDISGEAPRGQVTAILGPSGAGKSTFLDALAGRIAKGSLEGSVR 169
Query: 347 LD 352
+D
Sbjct: 170 ID 171
>08_02_0582 +
18993816-18993890,18994050-18994446,18995645-18995748,
18995863-18996004,18996118-18996237,18996341-18996465,
18996903-18997061,18997161-18997323,18997420-18997545,
18997628-18997711,18997761-18998173,18998199-18998273,
18998463-18998663,18998862-18998971,18999072-18999156,
18999365-18999493,18999596-18999701,18999825-18999913,
19000064-19000366
Length = 1001
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 167 KKRYIGEKMSSDTNKPEGSNAEPNKPICLIILGMAGAGKTSF 292
KK Y G+ + D +G + K C +LG GAGKTSF
Sbjct: 684 KKVYPGKNGNPDKLAVKGLSLALRKGQCFGMLGPNGAGKTSF 725
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 326 SRPYLVNLDPACREVPYPANIDIRDTVDYK-EVMKQYGLGPNGGIVTALNLFSTKFGQVV 502
+ PYL +L A Y A + I D D+ + +YG + G+ + ++ T FG++
Sbjct: 111 TEPYLQSLARALSHY-YKAQLLILDVTDFSLRIQSKYG-SSSKGLAQSQSISETTFGRMS 168
Query: 503 DLI 511
DLI
Sbjct: 169 DLI 171
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 29.5 bits (63), Expect = 5.9
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 797 DFEAFQEALNADGGGETEGGNT-YIGNLTQSMALALDSFYSDLKCCGVSAHTGEGIXE 967
D E Q DGGG GG + L S A+A+ + C G SA T GI +
Sbjct: 45 DEEKIQNDAGGDGGGRRGGGGGGSMSMLMLSTAVAVCGSFEFGTCVGYSAPTQSGIVD 102
>02_01_0077 -
546033-546223,546314-546566,546635-546865,547165-547331,
547369-548008
Length = 493
Score = 29.5 bits (63), Expect = 5.9
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Frame = +2
Query: 467 LNLFSTKFGQ-VVDLIE--KAGKKHKYCVIDTPGQIEVFTWSASGTIVTETLASSCPTVV 637
+NL +T F + +V+++ K + +DT I + T S + +TET C T V
Sbjct: 385 MNLLATSFNERLVEVVRLLKNQPNIRATFVDTYTTIGMATISPNNYGLTETSRGCCGTGV 444
Query: 638 VYVMDTVRSVSPVTFMSNMLYACSILYKTRLPFI----VVMNKI 757
+ V T R T S +Y + + R+ I V+MN I
Sbjct: 445 IEVGQTCRGRRACTHPSKYIYWDAAHHTERMNQIITEEVIMNSI 488
>05_03_0162 -
9050981-9051003,9051141-9052273,9052388-9053310,
9053560-9054615
Length = 1044
Score = 29.1 bits (62), Expect = 7.7
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +2
Query: 179 IGEKMSSDTNK-----PEGSNAEPNKPICLIILGMAGAGKTSFTRRL 304
+GEK+ DT G N + N + + ++G G GKT+ +++
Sbjct: 175 VGEKIEEDTRTLVKMLTNGKNKKQNAVVVVAVVGTGGIGKTTLAKKV 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,732,785
Number of Sequences: 37544
Number of extensions: 557318
Number of successful extensions: 1784
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1781
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3910923072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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