Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B17
         (1264 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   3.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   6.2  

>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 386 IDIRDTVDYKEVMKQYGLGPNGGIVTALNLFSTKFGQVVDLI 511
           + +  T DY E +  YGL P   + T   +F   F   + +I
Sbjct: 487 LQLNPTTDYSETVYWYGLDPLWMLATNKIIFLNSFKMKLSII 528


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 9/15 (60%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = +1

Query: 643 CNGHSTQC-VTRHIY 684
           CNG+ST+C   RH+Y
Sbjct: 344 CNGYSTKCFFDRHLY 358



 Score = 24.2 bits (50), Expect = 8.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 631 SRSVCNGHSTQCVT 672
           +R  CNGH+++C T
Sbjct: 280 ARCKCNGHASECTT 293


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,100,095
Number of Sequences: 2352
Number of extensions: 24194
Number of successful extensions: 36
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 144696438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)