Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B16
(1280 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 103 1e-20
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 101 3e-20
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 100 7e-20
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 91 7e-17
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 4e-07
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 58 6e-07
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 56 1e-06
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 5e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 51 7e-05
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 50 2e-04
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 44 0.011
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 42 0.045
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.14
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.42
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 37 1.3
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_Q9NGX2 Cluster: Diaphanous protein; n=3; Entamoeba hist... 36 2.3
UniRef50_A1GBV0 Cluster: Collagen triple helix repeat precursor;... 35 5.2
UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoe... 34 9.1
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 103 bits (246), Expect = 1e-20
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +2
Query: 119 GRTAKNVNATKYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVL 298
G+ K+ N K T+Y K ++ + RRRYDRKQ G+GGQ+KPIF IVL
Sbjct: 14 GKCRKHTNH-KVTQY---KKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVL 69
Query: 299 RLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 406
R+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 70 RMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 101 bits (243), Expect = 3e-20
Identities = 50/88 (56%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 149 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 322
K T+Y K + + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 323 VRSQVALKRCKHFELGGDKKRKGQMIQF 406
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 34.3 bits (75), Expect = 6.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 94 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 204
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 100 bits (240), Expect = 7e-20
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 149 KYTRYHSTKSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CK 322
K T+Y K + + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+
Sbjct: 22 KVTQY---KKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCR 78
Query: 323 VRSQVALKRCKHFELGGDKKRKGQMIQF 406
+ +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 79 SKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 34.3 bits (75), Expect = 6.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +1
Query: 94 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 204
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 90.6 bits (215), Expect = 7e-17
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Frame = +2
Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
K+ K+T + T K + + +RRYDRKQ GYGGQ+KP+F IVLRL
Sbjct: 59 KSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRL 118
Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 119 QCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.4 bits (135), Expect = 4e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 731 CINESANARGEAVCVLGALPLPRSLTRCXRSFGCGERYQL-TQRRXYGYPQNQGIXQ 898
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 57.6 bits (133), Expect = 6e-07
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 179 PRKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCK 355
P K +L + +RRYDRKQQGYGGQ+KP+F ++L C CK +LKR K
Sbjct: 28 PGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTK 87
Query: 356 HFEL 367
F++
Sbjct: 88 RFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 56.4 bits (130), Expect = 1e-06
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +2
Query: 206 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 385
RRRYDRKQ+G+GG+ KPI I LR C CK + L R + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 386 K 388
K
Sbjct: 98 K 98
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 5e-06
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 290 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 391
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 50.8 bits (116), Expect = 7e-05
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +2
Query: 755 RGEAVCVLGALPLPRSLTRCXRSFGCGERYQLT 853
R +C G +PLPRSLTR RSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 49.6 bits (113), Expect = 2e-04
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 206 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRC 352
+RRYDRKQQG+GGQ+KP+F + ++EC CK+ + C
Sbjct: 22 KRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRESTC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 43.6 bits (98), Expect = 0.011
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +3
Query: 198 PGXEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*RDASTLSSVVT 377
P D ++ VTVV P+ SS RR +P R+L SV S AR DAST SSVVT
Sbjct: 42 PKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
Query: 378 R 380
R
Sbjct: 102 R 102
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 41.5 bits (93), Expect = 0.045
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -2
Query: 901 FLXYPLILWITVXPPLSELIPL 836
F YPLILWITV PPLSEL PL
Sbjct: 29 FRLYPLILWITVLPPLSELTPL 50
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.14
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 801 ERGSGRAPNTQTASPRALADSLMQ 730
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.3 bits (85), Expect = 0.42
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 729 SALMNRPTXGERRFAYW 779
+ALMNRPT GERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 36.7 bits (81), Expect = 1.3
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +2
Query: 164 HSTKSPRK---GTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQ 334
HS + RK L +RR+ R GYGG +P F I LRL C +C
Sbjct: 20 HSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAIT 79
Query: 335 VALKRCKHFEL 367
R K FE+
Sbjct: 80 PPGIRAKKFEI 90
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 1.7
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 338 ALKRCKHFELGGDKKRKG 391
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q9NGX2 Cluster: Diaphanous protein; n=3; Entamoeba
histolytica|Rep: Diaphanous protein - Entamoeba
histolytica
Length = 1209
Score = 35.9 bits (79), Expect = 2.3
Identities = 23/91 (25%), Positives = 26/91 (28%)
Frame = +2
Query: 956 AGXXP*APPPXXXXKIDXQXXGGXPXXXXXIPXXPPXXPPXXXLFXPXXXRXPVXLSPXG 1135
A P PPP + P +P PP PP P + P
Sbjct: 606 ASSVPPPPPPPGMPGMPGMPGMPPPPPPPGMPGMPPPPPPPGMPGMPPPPPGMPGMPPPP 665
Query: 1136 XGXXSXXPPXXFXXGXXXPPXGXVXKPPXXP 1228
G PP G PP G PP P
Sbjct: 666 PGMPGMPPPPPGMPGMPPPPPGMPGMPPPPP 696
>UniRef50_A1GBV0 Cluster: Collagen triple helix repeat precursor; n=2;
Salinispora|Rep: Collagen triple helix repeat precursor -
Salinispora arenicola CNS205
Length = 292
Score = 34.7 bits (76), Expect = 5.2
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 1/83 (1%)
Frame = +1
Query: 1021 WXXXXXXXXPXVXPXXP-PXXPPVPTXXXXXSXPPFPXGXXGXFXXPXXXFPXRXGXPPX 1197
W P P P P PP PT + PP P G G P P PP
Sbjct: 73 WNDKCGHTCPSGPPGPPGPTGPPGPTGPPGPTGPPGPTGPPGPTGPPGPTGPPGPTGPPG 132
Query: 1198 RGGXXTPXXPXXXXFXXXXXXPP 1266
G P P PP
Sbjct: 133 PTGPPGPTGPPGPTGPPGPTGPP 155
>UniRef50_UPI000049A0E6 Cluster: diaphanous protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: diaphanous protein - Entamoeba
histolytica HM-1:IMSS
Length = 1176
Score = 33.9 bits (74), Expect = 9.1
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +2
Query: 1028 PXXXXXIPXXPPXXPPXXXLFXPXXXRXPVXLSPXGXGXXSXXPPXXFXXGXXXPPXGXV 1207
P +P PP PP P P P G PP G PP G
Sbjct: 655 PPPPPGMPGMPPPPPPGMPGMPPPPPGMPGMPPPPPPGMPGMPPPPPGMPGMPPPPPGMP 714
Query: 1208 XKPPXXP 1228
PP P
Sbjct: 715 GMPPPPP 721
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,932,035
Number of Sequences: 1657284
Number of extensions: 12622678
Number of successful extensions: 35211
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 29095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33148
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 130794573157
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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