Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B16
         (1280 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581...    92   1e-18
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519...    92   1e-18
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399...    92   1e-18
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155...    92   1e-18
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087...    92   1e-18
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046...    92   1e-18
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973...    92   1e-18
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561     53   4e-07
02_05_0686 - 30900748-30902167,30903442-30904742                       31   2.0  
04_03_0783 + 19607871-19607951,19608027-19608074,19608719-196088...    30   3.4  
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998           30   4.5  

>07_03_0648 +
           20257442-20257528,20257688-20257867,20258055-20258129,
           20258230-20258289
          Length = 133

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
           KN    K+T +  T  K  +     + +RRYDRKQ GYGGQ+KP+F         IVL+L
Sbjct: 41  KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 100

Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
           +C  CK  SQ  +KRCKHFE+GGDKK KG
Sbjct: 101 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129


>07_03_0646 +
           20250684-20250686,20251522-20251701,20251899-20251973,
           20252072-20252131
          Length = 105

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
           KN    K+T +  T  K  +     + +RRYDRKQ GYGGQ+KP+F         IVL+L
Sbjct: 13  KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 72

Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
           +C  CK  SQ  +KRCKHFE+GGDKK KG
Sbjct: 73  QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101



 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +1

Query: 94  MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 204
           MVNVPK ++TY              +QYKK K+  +AQG
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 39


>07_03_0643 +
           20239224-20239310,20239470-20239649,20239837-20239911,
           20240012-20240071
          Length = 133

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
           KN    K+T +  T  K  +     + +RRYDRKQ GYGGQ+KP+F         IVL+L
Sbjct: 41  KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 100

Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
           +C  CK  SQ  +KRCKHFE+GGDKK KG
Sbjct: 101 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129


>07_03_0641 +
           20214245-20214247,20215086-20215265,20215463-20215537,
           20215636-20215695
          Length = 105

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
           KN    K+T +  T  K  +     + +RRYDRKQ GYGGQ+KP+F         IVL+L
Sbjct: 13  KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 72

Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
           +C  CK  SQ  +KRCKHFE+GGDKK KG
Sbjct: 73  QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101



 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +1

Query: 94  MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 204
           MVNVPK ++TY              +QYKK K+  +AQG
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 39


>07_03_0640 +
           20207497-20207554,20208457-20208482,20208522-20208701,
           20208891-20208965,20209062-20209121
          Length = 132

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
           KN    K+T +  T  K  +     + +RRYDRKQ GYGGQ+KP+F         IVL+L
Sbjct: 40  KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 99

Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
           +C  CK  SQ  +KRCKHFE+GGDKK KG
Sbjct: 100 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128


>07_03_0639 +
           20203902-20203988,20204152-20204331,20204529-20204603,
           20204696-20204755
          Length = 133

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
           KN    K+T +  T  K  +     + +RRYDRKQ GYGGQ+KP+F         IVL+L
Sbjct: 41  KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 100

Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
           +C  CK  SQ  +KRCKHFE+GGDKK KG
Sbjct: 101 QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129


>07_03_0226 +
           15395380-15395382,15396993-15397172,15397286-15397360,
           15397466-15397525
          Length = 105

 Score = 91.9 bits (218), Expect = 1e-18
 Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +2

Query: 131 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRL 304
           KN    K+T +  T  K  +     + +RRYDRKQ GYGGQ+KP+F         IVL+L
Sbjct: 13  KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLKL 72

Query: 305 ECADCKVRSQVALKRCKHFELGGDKKRKG 391
           +C  CK  SQ  +KRCKHFE+GGDKK KG
Sbjct: 73  QCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101



 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = +1

Query: 94  MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 204
           MVNVPK ++TY              +QYKK K+  +AQG
Sbjct: 1   MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 39


>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
          Length = 62

 Score = 53.2 bits (122), Expect = 4e-07
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +2

Query: 290 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 391
           IVL+L+C  CK  SQ  +KRCKHF++GGDKK KG
Sbjct: 25  IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
 Frame = +2

Query: 974  APPPXXXXKIDXQXXGGXPXXXXXIPXXPPXXPPXXXLFXPXXXRXPVXLSPXGXGXXSX 1153
            APPP    K         P      P  PP  PP      P     P    P G      
Sbjct: 312  APPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPP----PPPAKGPPPPPPPKGPSPPPP 367

Query: 1154 XPPXXFXXG-XXXPPXGXVXKPPXXP 1228
             PP     G    PP G   +PP  P
Sbjct: 368  PPPGGKKGGPPPPPPKGGASRPPAAP 393



 Score = 29.5 bits (63), Expect = 6.0
 Identities = 18/73 (24%), Positives = 19/73 (26%)
 Frame = +2

Query: 1049 PXXPPXXPPXXXLFXPXXXRXPVXLSPXGXGXXSXXPPXXFXXGXXXPPXGXVXKPPXXP 1228
            P  PP  PP      P     P    P         PP         PP G    PP  P
Sbjct: 311  PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370

Query: 1229 TXAXSGXXXXXPR 1267
                 G     P+
Sbjct: 371  GGKKGGPPPPPPK 383


>04_03_0783 +
           19607871-19607951,19608027-19608074,19608719-19608806,
           19608887-19608930,19609016-19609099
          Length = 114

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 134 FLQYVLRCFGTFTIFEFVRHDINKRQKEILESPESKGF 21
           FL  VL C GT  +   +R  +NK  KE  + P  + F
Sbjct: 58  FLSGVLSCIGTAVLAVCLRIQVNKDNKEFKDLPPERAF 95


>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
          Length = 391

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 113 SAGRTAKNVNATKYTRYHSTKSPRKGTLPRXRRRY 217
           S+GRTA++    +  R+H T   RKG LPR   ++
Sbjct: 99  SSGRTARDAAVAQQERHHDTIKRRKG-LPRWTEKF 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,379,514
Number of Sequences: 37544
Number of extensions: 396176
Number of successful extensions: 1109
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)