Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B15
(1252 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 446 e-124
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 240 6e-62
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 191 3e-47
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 183 1e-44
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 181 4e-44
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 162 1e-38
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 159 1e-37
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 142 1e-32
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 124 4e-27
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 123 1e-26
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 122 1e-26
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 120 6e-26
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 120 1e-25
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 114 4e-24
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 107 8e-22
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 104 4e-21
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 100 9e-20
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 93 1e-17
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 85 3e-15
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 84 6e-15
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 74 9e-12
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 73 1e-11
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 73 2e-11
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 71 5e-11
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 60 9e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 4e-06
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 52 4e-05
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 48 4e-04
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.011
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.077
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.13
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.18
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.23
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.54
UniRef50_Q0CLV2 Cluster: Predicted protein; n=1; Aspergillus ter... 37 1.3
UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 - Ara... 35 5.1
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 8.8
UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1; ... 34 8.8
UniRef50_Q8BTI8 Cluster: Serine/arginine repetitive matrix prote... 34 8.8
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 446 bits (1099), Expect = e-124
Identities = 216/253 (85%), Positives = 225/253 (88%)
Frame = +1
Query: 130 SKKISAKTQVTLSLGNGVLRFSKSKLFHKQAQXKFIGKKHPKPEQPKQLTVVVKQXGGXX 309
+KK S K LGNGV+RFSKSK+FHK+A+ KFIGKK+PKPE+PK+LTVVVKQ GG
Sbjct: 21 TKKKSTKKPRNYDLGNGVMRFSKSKMFHKKAKYKFIGKKNPKPEKPKKLTVVVKQIGGEK 80
Query: 310 HGGTXTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 489
+GGT TVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV
Sbjct: 81 NGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 140
Query: 490 VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXX 669
VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVI TSTRISLGNFKLPKHFNDDYF
Sbjct: 141 VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKK 200
Query: 670 XXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAF 849
EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAF
Sbjct: 201 CVKRTVKRKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAF 260
Query: 850 GLRSSQYPHRLRF 888
GLRSSQYPHRLRF
Sbjct: 261 GLRSSQYPHRLRF 273
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 240 bits (587), Expect = 6e-62
Identities = 126/253 (49%), Positives = 160/253 (63%)
Frame = +1
Query: 130 SKKISAKTQVTLSLGNGVLRFSKSKLFHKQAQXKFIGKKHPKPEQPKQLTVVVKQXGGXX 309
S K K V L G+LR+SK++++ ++A + KK P E+ K VK+ GG
Sbjct: 13 SAKKGKKHPVNSYLKGGILRYSKAQMYKRRALYRLKDKKSPVVEKAKVPIKKVKKIGGPK 72
Query: 310 HGGTXTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRV 489
+GG TV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLAGRH GKRV
Sbjct: 73 NGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLAGRHQGKRV 132
Query: 490 VLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXX 669
VL+ +L SGLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND YF
Sbjct: 133 VLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKA 192
Query: 670 XXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAF 849
DIFA KKE++VP+EQRK DQK VD A++K I A P+ K YL+ F
Sbjct: 193 KKDKKTGEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFFAKYLQNMF 249
Query: 850 GLRSSQYPHRLRF 888
L SSQYPHR+RF
Sbjct: 250 ALHSSQYPHRMRF 262
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 191 bits (466), Expect = 3e-47
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 183 bits (445), Expect = 1e-44
Identities = 106/245 (43%), Positives = 147/245 (60%), Gaps = 4/245 (1%)
Frame = +1
Query: 166 SLGNGVLRFSKSKLFHK--QAQXKFIGK--KHPKPEQPKQLTVVVKQXGGXXHGGTXTVP 333
SL +G FSK++ K +A+ + + K K K Q K+ V+ K+ GG +GGT V
Sbjct: 2 SLASGKYVFSKAEAARKYLEAKRRQLPKSVKLAKKAQKKKPLVIEKKIGGDKNGGTRLVS 61
Query: 334 LKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPS 513
++ FYP + + +K+ +IR +L+ GT+ ILLAG + GKRVVL+ L S
Sbjct: 62 TRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILILLAGVNRGKRVVLLKALKS 121
Query: 514 GLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXX 693
GLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H ND YF
Sbjct: 122 GLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHINDTYF----RRHKVKKEA 177
Query: 694 XEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 873
EG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD +L YL+ FGL+++ P
Sbjct: 178 KEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAAMLVKYLRTIFGLKNNMIP 236
Query: 874 HRLRF 888
HRL+F
Sbjct: 237 HRLKF 241
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 181 bits (440), Expect = 4e-44
Identities = 100/242 (41%), Positives = 143/242 (59%), Gaps = 2/242 (0%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXKFIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPLKRRK 348
L GV FS+SK+FHK+ K K ++ ++ V VK+ G +GG +PLK+ +
Sbjct: 30 LPGGVWLFSRSKMFHKRGLFKVKHAAPTKEKRKRKKRVTVKRVKGEKNGGKRVLPLKKER 89
Query: 349 SFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLL 522
YPT++ + + +S +P S+ +R + GTV ILLAG H GKRVV + L +GLL
Sbjct: 90 RSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVLILLAGPHRGKRVVFLKQLKTGLL 149
Query: 523 LVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEG 702
VTGP+ N CPLRRI Q YVI TST++ L KLP+ +D YF EG
Sbjct: 150 PVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF--KRNKGPKRGRKDEG 207
Query: 703 DDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRL 882
+IF K +++V SE+ K Q VD+ V++A+ A P+KK+L YL A F LR+ YPH++
Sbjct: 208 -EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPEKKMLLHYLAATFSLRNRMYPHKM 266
Query: 883 RF 888
+F
Sbjct: 267 KF 268
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 162 bits (394), Expect = 1e-38
Identities = 97/243 (39%), Positives = 137/243 (56%), Gaps = 3/243 (1%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQA--QXKFIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPLKR 342
L G+ R+S+S ++ K+A + K G K ++P+ T K GG +GG VP++R
Sbjct: 15 LAPGISRYSRSAIYKKRALYKRKKTGVKKVVQDEPRTKT---KDIGGDKNGGKRVVPVQR 71
Query: 343 RKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLL 522
+YPT++ +R R + ++R ++ GTV ILLAG H GKRVV + L SGLL
Sbjct: 72 ESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAGAHRGKRVVFLKQLNSGLL 129
Query: 523 LVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKH-FNDDYFXXXXXXXXXXXXXXE 699
LVTGPF N PLRRIPQ YVI TST I + + KLP+H F D+ +
Sbjct: 130 LVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESY-----FKGEPKKKKR 184
Query: 700 GDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 879
+D+F E+ PSEQR DQK VD+ ++ I A P+ ++ YL + F LR Q+PH
Sbjct: 185 SEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPN---MKKYLSSLFSLRKGQFPHD 241
Query: 880 LRF 888
+ F
Sbjct: 242 MVF 244
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 159 bits (387), Expect = 1e-37
Identities = 85/189 (44%), Positives = 113/189 (59%), Gaps = 3/189 (1%)
Frame = +1
Query: 331 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 501
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 502 ILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 681
L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDL 169
Query: 682 XXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRS 861
+ +F+T+ +KY S+ RK DQK VD + AI + PD K+L YL++ F L
Sbjct: 170 KESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLRSLFSLGK 229
Query: 862 SQYPHRLRF 888
YPH++ F
Sbjct: 230 RDYPHKMIF 238
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 142 bits (345), Expect = 1e-32
Identities = 76/157 (48%), Positives = 97/157 (61%), Gaps = 1/157 (0%)
Frame = +1
Query: 421 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVICTS 597
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 598 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVD 777
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 778 EAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 888
++ AI P+ K L GYL F L +QYPH+++F
Sbjct: 181 APILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 124 bits (300), Expect = 4e-27
Identities = 78/186 (41%), Positives = 105/186 (56%)
Frame = +1
Query: 331 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLA 114
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGPF N PLRR+ Q YVI TST++ + L K F+D YF
Sbjct: 115 SGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKKK 170
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG+ A K+EK + +K DQK VD A+IKAI A P+ L+ YL A F L+
Sbjct: 171 KTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGARFSLKQGMK 227
Query: 871 PHRLRF 888
PH L F
Sbjct: 228 PHELVF 233
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 123 bits (296), Expect = 1e-26
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = +1
Query: 400 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 579
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 580 YVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKT 759
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 760 DQKTVDEAVIKA 795
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 122 bits (295), Expect = 1e-26
Identities = 79/219 (36%), Positives = 113/219 (51%)
Frame = +1
Query: 232 FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPLKRRKSFYPTQEKIRASSGGRPFSKH 411
F+ KK+ K PK++ V G + K K +IR+++ + K
Sbjct: 27 FVAKKN-KVVAPKKVVAPVTPVEKTFGKGKRVIAAKASKFAPSIPAEIRSTAAKKVQQKV 85
Query: 412 VRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVIC 591
+R ++ GTV I+LAGR AGKRVV + L SGL+L+TGPF N PLRRI QRYVI
Sbjct: 86 A--LRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIA 143
Query: 592 TSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKT 771
TST+I + + K+ ND YF D+ K EK ++ R DQK+
Sbjct: 144 TSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDE---KKAEKKKIADSRVADQKS 200
Query: 772 VDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 888
VD A++ + +K L YLK F L+ ++PH+L+F
Sbjct: 201 VDSAILAVL---KKEKFLTVYLKTKFYLKKGEFPHQLKF 236
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 120 bits (290), Expect = 6e-26
Identities = 81/182 (44%), Positives = 104/182 (57%), Gaps = 3/182 (1%)
Frame = +1
Query: 352 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 528
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 529 TGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDD 708
TGPF N P+RR+ Q YVI TST++ + + K F+D YF EG +
Sbjct: 110 TGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-E 164
Query: 709 IFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRL 882
+F T+KE K +P E +K DQK VD +IKAI A PD L+ YL A F LR PH +
Sbjct: 165 LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPD---LKTYLGARFSLRDGDKPHEM 220
Query: 883 RF 888
F
Sbjct: 221 VF 222
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 120 bits (288), Expect = 1e-25
Identities = 73/207 (35%), Positives = 104/207 (50%)
Frame = +1
Query: 265 PKQLTVVVKQXGGXXHGGTXTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 444
P+ + ++ K GG +GG VP K+ +YP +K + K + +RP++K G
Sbjct: 17 PEPIKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSG 75
Query: 445 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFK 624
T+ ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I +
Sbjct: 76 TIVILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVD 135
Query: 625 LPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGA 804
+ K ++ YF D ++K E R DQK +D ++ I
Sbjct: 136 V-KKIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEK 191
Query: 805 RPDKKVLRGYLKAAFGLRSSQYPHRLR 885
P +L YLK F L+ QYPH ++
Sbjct: 192 EP---LLSSYLKVKFSLKKGQYPHAMK 215
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 114 bits (275), Expect = 4e-24
Identities = 66/171 (38%), Positives = 97/171 (56%)
Frame = +1
Query: 376 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 555
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 556 PLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKY 735
P+RR+ Y+I TST++ + + K F D+YF D TK +
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRV 137
Query: 736 VPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 888
V SE+RK Q+ +D ++I +I + P ++ YLK F L S +PH+L+F
Sbjct: 138 V-SEERKKTQQALDASIIPSIQSNP---LMMSYLKTRFTLTSGMFPHKLKF 184
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 107 bits (256), Expect = 8e-22
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Frame = +1
Query: 331 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
P ++ + +YP ++ + + + H ++RP+L+ GT+ ILLAGR GKRV+L+ L
Sbjct: 26 PSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPGTILILLAGRFRGKRVILLKHLG 83
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNF---KLPKHFNDDYFXXXXXXXXX 681
G+LLVTGPF N PLRR+ RYVI TS+ + L L K +YF
Sbjct: 84 QGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVDQKTLEKVSQPEYF------TRE 137
Query: 682 XXXXXEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFG 852
+G++ F K EK + R DQK +D+A++ I P L YL + F
Sbjct: 138 KAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQALLATIKKEP---FLGSYLASTFS 194
Query: 853 LRSSQYPHRLRF 888
LR+ PH +++
Sbjct: 195 LRTGDKPHEMKW 206
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 104 bits (250), Expect = 4e-21
Identities = 67/184 (36%), Positives = 104/184 (56%)
Frame = +1
Query: 337 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 516
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 517 LLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 696
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYF----AKEKLTKKEK 116
Query: 697 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 876
+ ++F ++ K + +E R DQK VD+A+I I P +L+ YL A+F L++ PH
Sbjct: 117 KEANLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYLSASFSLKNGDKPH 172
Query: 877 RLRF 888
L+F
Sbjct: 173 MLKF 176
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 100 bits (239), Expect = 9e-20
Identities = 51/124 (41%), Positives = 69/124 (55%)
Frame = +1
Query: 517 LLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 696
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYFKRTKYFGK------ 63
Query: 697 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPH 876
E DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+ FGL QYPH
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGLSKRQYPH 123
Query: 877 RLRF 888
+ F
Sbjct: 124 NMVF 127
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 93.5 bits (222), Expect = 1e-17
Identities = 74/208 (35%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Frame = +1
Query: 328 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 507
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 508 PSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 687
SGLLLVTGPF+FN PLRR+ RYVI TST + ++ P++
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV----YEFPEYDGSSLKSSVERAVSDLT 124
Query: 688 XXXEGDD------IFATKKEKYVPSEQRKTDQKTVDE------AVIKAIGARPD------ 813
G F +K+K + D+ +V E A +KA+ ++ D
Sbjct: 125 DESFGKTKETKLAEFKDRKKKNKNKDSMFVDEPSVSEKSPELMAKLKALQSKVDDVLVPS 184
Query: 814 -KKV--LRGYLKAAFGLRSSQYPHRLRF 888
KK L YLK+ F LR++ YPH L+F
Sbjct: 185 LKKSQHLTKYLKSRFTLRNNMYPHLLKF 212
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 85.4 bits (202), Expect = 3e-15
Identities = 62/175 (35%), Positives = 86/175 (49%), Gaps = 3/175 (1%)
Frame = +1
Query: 373 IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNS 552
+R RP + +R+I P G V ILL+GR GKRVV + L SGLLLVTGPF N
Sbjct: 44 VRKRKAPRPAT--LRKIVP----GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKING 97
Query: 553 CPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF---XXXXXXXXXXXXXXEGDDIFATK 723
PL+R+ YVI TST++ + NDDYF G+ +
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQ 156
Query: 724 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 888
+ + ++ QK+VD A+I AI ++L+ YL A F + + PH L F
Sbjct: 157 TAEKTRLDGKRNTQKSVDAALITAI---KKTQLLKQYLGARFTIGKTTRPHELVF 208
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 84.2 bits (199), Expect = 6e-15
Identities = 72/192 (37%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Frame = +1
Query: 394 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 567
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 568 IPQRYVICTSTRISLGNF---KL-----PKHF---------NDDYFXXXXXXXXXXXXXX 696
+ RYVI TS ++ L K+ PK+F ++ F
Sbjct: 84 VNARYVIATSQKVDLAGIDEAKINEIAQPKYFTAEKSKEKAGEEAFFKQGEKPQVRLGNS 143
Query: 697 E------GDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKV--LRGYLKAAFG 852
E DI KKE S R DQK +D+A+I I KKV L YL ++F
Sbjct: 144 ELEHGAHNADIVMQKKE---VSSSRVADQKAIDKALIANI-----KKVEFLASYLASSFT 195
Query: 853 LRSSQYPHRLRF 888
LR PH +++
Sbjct: 196 LRKGDKPHEMKW 207
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 73.7 bits (173), Expect = 9e-12
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Frame = +1
Query: 421 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVICTS 597
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 598 TRISLGN----------FKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSE 747
T + + + F+ PK + + +K + S+
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 748 QRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHR 879
R QK +D A+I AI K GYL++ F ++ PHR
Sbjct: 149 ARAQLQKKIDAALIAAIKKDAQGKEKAGYLRSVFTVKPGDAPHR 192
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 73.3 bits (172), Expect = 1e-11
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Frame = +1
Query: 415 RRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICT 594
R++R ++++G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I T
Sbjct: 68 RKMRSSIQVGKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVT 127
Query: 595 STRI----SLGNFK-----LPKHFNDDYF--XXXXXXXXXXXXXXEGDDIFATKKEKYVP 741
ST I +L K + ND+ F + + +F + +
Sbjct: 128 STNIFDFNNLSQVKEKFIQSAERINDEIFIKSMDVKKRQKKLLKNKNESLFMNDVIQKI- 186
Query: 742 SEQRKTDQKTVDEAVI-KAIG--ARPD---KKVLRGYLKAAFGLRSSQYPHRLRF 888
E R +D K ++ K +G +P+ K+ R Y+K+ F LR++ H + F
Sbjct: 187 KEIRDSDPKMKKIKLLQKELGDLLKPEISKDKMFRSYIKSKFTLRNNMSFHNMNF 241
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 72.9 bits (171), Expect = 2e-11
Identities = 69/238 (28%), Positives = 110/238 (46%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXKFIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPLKRRK 348
L G R+S L+ ++ + K K ++ K + V+K G +GGT V L++ K
Sbjct: 53 LVRGTGRYSIKALYERKYSA--VKSKCEKKKKEKVVATVIKTVSGDKNGGTGVVKLQKMK 110
Query: 349 SFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 528
+ + + + S P KH + + N TV I++ G+H +RVV + L G LL+
Sbjct: 111 MYLGSCKAMAKS----PAFKHEKAVC-NSTPETVLIIITGQH--RRVVFLKQLSRGFLLI 163
Query: 529 TGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDD 708
TGP A N L R Q+ V+ TST I+ D YF +
Sbjct: 164 TGPLALNLVLLYRTHQKSVVITSTTINTQ--------TDVYF----KMKQLHKPRHQQGK 211
Query: 709 IFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRL 882
IF +K+KY +Q K D KT+D ++ P +K+ +L ++F L + PH+L
Sbjct: 212 IFDMEKDKY-GIKQCKADHKTLDSQIL------PKRKL---FLNSSFSLANGMCPHKL 259
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.3 bits (167), Expect = 5e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = +1
Query: 445 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFK 624
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 625 LPKHFNDDYF 654
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.5 bits (140), Expect = 9e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +1
Query: 481 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYF 654
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYF 212
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 4e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 424 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTR 603
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 604 ISL 612
I +
Sbjct: 109 IEV 111
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 51.6 bits (118), Expect = 4e-05
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1
Query: 724 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 888
KEKY +EQRK DQK VD ++ + P LRGYL+++F L YPH+L F
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLRSSFCLSGGVYPHKLVF 54
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 48.4 bits (110), Expect = 4e-04
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = +1
Query: 367 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 546
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 547 NSCPLRRIPQRYVICTSTRISL 612
N PL RI +RY++ TST + L
Sbjct: 65 NGIPLFRIDERYLLATSTVLDL 86
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 43.6 bits (98), Expect = 0.011
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +1
Query: 430 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRIS 609
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 610 LGNFKLPKHFNDDY 651
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.077
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 427 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 585
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.13
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1
Query: 424 RPNLKIGTVCILLAGRHAGKRVVLVGILP 510
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.18
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 427 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 570
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.1 bits (87), Expect = 0.23
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 352 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 531
FYP + ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+T
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLIT 259
Query: 532 GPFAFNSCP 558
G F N P
Sbjct: 260 GSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 37.9 bits (84), Expect = 0.54
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +1
Query: 433 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISL 612
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_Q0CLV2 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 1081
Score = 36.7 bits (81), Expect = 1.3
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Frame = +2
Query: 557 RYAAFLSAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNT 736
R+AA LS + S+ + S T + N T+ S + +++ + P++ R+T
Sbjct: 148 RHAADLSDVPSSVSKKRRSRTRDTANGDAASTTASDISRAPTPTSSAAISNGQPEQPRST 207
Query: 737 F----HLSSA--KPIRRQSTRL*SKPSEPDPTRRCSADTSRRPSDSAPANI 871
H +A + R S + K EP P R SA T RRP S P NI
Sbjct: 208 IVRLKHRGAAASQTGRTDSAQSGLKSKEPSPARS-SASTRRRPRQSMPENI 257
>UniRef50_Q6IMG0 Cluster: GRP21; n=11; Eukaryota|Rep: GRP21 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1193
Score = 34.7 bits (76), Expect = 5.1
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 587 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLS--SAKP 760
S P S+ + +S I+ +S S S + ++ P+ K ++ S S+KP
Sbjct: 1048 STKPKSKPSSKPTSKPSSKPISKPSTKSTSKPSSKSTSKPSTKPKSKPSSKPTSKPSSKP 1107
Query: 761 IRRQSTRL*SKPSEPDPTRRCSADTSRRPSDSAPANIP 874
I + ST+ SKPS PT + S ++ +PS S P + P
Sbjct: 1108 ISKPSTKSTSKPSS-KPTSKPSTVSASKPS-SKPTSKP 1143
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 8.8
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 391 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 549
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1;
Glyptapanteles indiensis|Rep: Putative uncharacterized
protein - Glyptapanteles indiensis
Length = 1065
Score = 33.9 bits (74), Expect = 8.8
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +2
Query: 602 EFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTR 781
++ S N ++I S + N QSN++ + T++P K+N+ H S+ P+ Q++
Sbjct: 523 QYMSINQNSFKQDLLIGSPE-NNIYNHQSNSRTIRTTIPSMKQNSTHPSN--PM-HQTSE 578
Query: 782 L*SKPSEPDPTRRCSADTSRRPS 850
L S+ + P ++ S S RPS
Sbjct: 579 L-SQQRQSQPNQQDSQQHSHRPS 600
>UniRef50_Q8BTI8 Cluster: Serine/arginine repetitive matrix protein 2;
n=41; root|Rep: Serine/arginine repetitive matrix protein
2 - Mus musculus (Mouse)
Length = 2703
Score = 33.9 bits (74), Expect = 8.8
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Frame = +2
Query: 545 SIRARYAAFLSAM*SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQK 724
S A+ + L+A+ A S++S+ ++S +S S+S+ S++ +SLP +
Sbjct: 2466 STGAQQPSTLAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPAQ 2525
Query: 725 KRNTF-HLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTSRRPSDSAPANIPIGCASKS 895
+ S P+ +++ R +P EP P +R +S S S+ ++ +S S
Sbjct: 2526 PEVALKRVPSPTPVPKEAIRE-GRPQEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSS 2582
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,004,085,223
Number of Sequences: 1657284
Number of extensions: 20158033
Number of successful extensions: 62206
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 58300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62139
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 126745205567
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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