Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B15
(1252 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 192 3e-48
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 191 4e-48
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 191 4e-48
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 182 3e-45
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 175 4e-43
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 118 3e-26
BC001428-1|AAH01428.1| 309|Homo sapiens pleckstrin homology dom... 32 5.0
X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein. 31 8.8
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 192 bits (467), Expect = 3e-48
Identities = 108/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L GV R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 RQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 191 bits (466), Expect = 4e-48
Identities = 107/246 (43%), Positives = 146/246 (59%), Gaps = 6/246 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 510
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKRVV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLA 169
Query: 511 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 690
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 SGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKPR 226
Query: 691 XXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQY 870
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L + Y
Sbjct: 227 HQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGIY 282
Query: 871 PHRLRF 888
PH+L F
Sbjct: 283 PHKLVF 288
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 182 bits (442), Expect = 3e-45
Identities = 105/247 (42%), Positives = 144/247 (58%), Gaps = 7/247 (2%)
Frame = +1
Query: 169 LGNGVLRFSKSKLFHKQAQXK----FIGKKHPKPEQPKQLTVVVKQXGGXXHGGTXTVPL 336
L G+ R+S+S ++ ++A K K K ++ K L V K GG +GGT V L
Sbjct: 50 LVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKL 109
Query: 337 KRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKR-VVLVGIL 507
++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L GR GK VV + L
Sbjct: 110 RKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRRRGKNWVVFLKQL 169
Query: 508 PSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXX 687
SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 170 ASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRKP 226
Query: 688 XXXEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQ 867
EG +IF T+KEKY +EQRK DQK VD ++ I A P L+GYL++ F L +
Sbjct: 227 RHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQ---LQGYLRSVFALTNGI 282
Query: 868 YPHRLRF 888
YPH+L F
Sbjct: 283 YPHKLVF 289
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 175 bits (425), Expect = 4e-43
Identities = 97/217 (44%), Positives = 131/217 (60%), Gaps = 2/217 (0%)
Frame = +1
Query: 244 KHPKPEQPKQLTVVVKQXGGXXHGGTXTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVR 417
K K ++ K L V K GG +GGT V L++ +YPT++ R S G +PFS+HVR
Sbjct: 79 KVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVR 138
Query: 418 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTS 597
++R ++ GT+ I+L GRH GKRVV + L SGLLLVT ++ PLRR Q++VI TS
Sbjct: 139 KLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTDLWSSIEVPLRRTHQKFVIATS 198
Query: 598 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQKTVD 777
T+I + N K+PKH D YF EG +IF T+KEKY +EQRK DQK VD
Sbjct: 199 TKIDISNVKIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVD 254
Query: 778 EAVIKAIGARPDKKVLRGYLKAAFGLRSSQYPHRLRF 888
++ I A P L+GYL++ F L + YPH+L F
Sbjct: 255 SQILPKIKAIPQ---LQGYLRSVFALTNGIYPHKLVF 288
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 118 bits (285), Expect = 3e-26
Identities = 71/177 (40%), Positives = 95/177 (53%), Gaps = 2/177 (1%)
Frame = +1
Query: 244 KHPKPEQPKQLTVVVKQXGGXXHGGTXTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVR 417
K K ++ K L V K GG +GGT V L++ +YPT++ R S G +PFS+HVR
Sbjct: 18 KVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVR 77
Query: 418 RIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTS 597
++R ++ GT+ I+L GRH GKRVV + L SGLLLVTGP + +
Sbjct: 78 KLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVSIEFLYEEHTRNLSLPLQ 137
Query: 598 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXXEGDDIFATKKEKYVPSEQRKTDQK 768
+ K+PKH D YF EG +IF T+KEKY +EQRK DQK
Sbjct: 138 PKSISAIVKIPKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQK 190
>BC001428-1|AAH01428.1| 309|Homo sapiens pleckstrin homology domain
containing, family B (evectins) member 2 protein.
Length = 309
Score = 31.9 bits (69), Expect = 5.0
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 128 PQKKSPQKPRSLCLWATXCCVSPNPSCSTS 217
PQ P+ PRSLCLW T PS T+
Sbjct: 198 PQPARPRAPRSLCLWQTWFAGKRAPSLPTA 227
>X98801-1|CAA67333.1| 1263|Homo sapiens dynactin protein.
Length = 1263
Score = 31.1 bits (67), Expect = 8.8
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +2
Query: 746 SSAKPIRRQSTRL*SKPSEPDPTRRCSADTSRRPSDSAPANIPIGCASKS 895
S++K ++R+ T +K S+ PT R + T+RRP + PA+ + AS S
Sbjct: 104 SASKVLKREGTDTTAKTSKLAPTARKT--TTRRPKPTRPASTGVAGASSS 151
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,076,856
Number of Sequences: 237096
Number of extensions: 3247635
Number of successful extensions: 8743
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 8112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8702
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17834978520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -