Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B14
(1365 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 6e-05
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 35 0.030
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.030
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.069
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.092
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 0.35
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.85
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.5
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 27 4.6
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 27 4.6
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 27 6.0
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 8.0
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 43.6 bits (98), Expect = 6e-05
Identities = 35/146 (23%), Positives = 37/146 (25%)
Frame = +2
Query: 536 PPPPPXXKXPPPPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQXKKGXPGG 715
P PPP PPP G N PP P P
Sbjct: 251 PAPPPI---PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAAN 307
Query: 716 GGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPLP 895
PPPP PP G PP+ P P G PPPP P
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP-PQGRSAPPPP-P 365
Query: 896 PXXXXGXFXXNPPRXTXXGGGGXPPP 973
P PP + P P
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 37.1 bits (82), Expect = 0.006
Identities = 35/131 (26%), Positives = 38/131 (29%), Gaps = 7/131 (5%)
Frame = +2
Query: 527 PXXPPPPPXXKXPPPPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQXKKGX 706
P PPPP PP G + PP P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPP-------PPPPPRSNAAGSIPLP--------- 354
Query: 707 PGGGGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPG-XGXXXP------NPX 865
P G PPPP+ P G PPP + PP PP G P N
Sbjct: 355 PQGRSAPPPPPPRS----APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNAS 410
Query: 866 GXKXPPPPLPP 898
PP P PP
Sbjct: 411 RTSTPPVPTPP 421
Score = 29.1 bits (62), Expect = 1.5
Identities = 30/125 (24%), Positives = 31/125 (24%), Gaps = 4/125 (3%)
Frame = +2
Query: 536 PPPPPXXKXPPPPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQXKKGXPGG 715
PP PPPP + PP P P G
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP------PLG 407
Query: 716 GGXXXPPPPKKXXXXXPP--PGGGPP--PXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPP 883
PP PP P PP P P PP P P G
Sbjct: 408 NASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM-PAA 466
Query: 884 PPLPP 898
PPLPP
Sbjct: 467 PPLPP 471
Score = 28.3 bits (60), Expect = 2.6
Identities = 18/56 (32%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +2
Query: 734 PPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGX-GXXXPNPXGXKXPPPPLPP 898
PP + P P PPP PP PP NP PPLPP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGT--VSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 27.5 bits (58), Expect = 4.6
Identities = 31/128 (24%), Positives = 31/128 (24%), Gaps = 10/128 (7%)
Frame = +2
Query: 542 PPPXXKXPPPPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQXKKGXPGGGG 721
PPP PPPP PP G P P P
Sbjct: 337 PPP----PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Query: 722 XXXP-------PPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPG--XGXXXPNPXGXK 874
P PP PP PP PP PP G P
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Query: 875 XP-PPPLP 895
P PPLP
Sbjct: 453 APIAPPLP 460
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 34.7 bits (76), Expect = 0.030
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = +2
Query: 731 PPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPL 892
PP P K P P PPP K PP P P P K PPPPL
Sbjct: 158 PPIPSKAP---PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP--PKVPPPPL 206
Score = 27.9 bits (59), Expect = 3.4
Identities = 22/101 (21%), Positives = 26/101 (25%)
Frame = +2
Query: 671 PXPQXXQXKKGXPGGGGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXX 850
P P Q + P PP P P PP PP +P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP----IPSSLPPPAQPAAPVKS 183
Query: 851 XPNPXGXKXPPPPLPPXXXXGXFXXNPPRXTXXGGGGXPPP 973
P+ PP+PP P T PP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.030
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +2
Query: 734 PPPKKXXXXXPPPGGGP---PPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPLPPXX 904
PPP P P P PP PP PPG P PPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP------PPPPPPPPAV 785
Query: 905 XXG 913
G
Sbjct: 786 SAG 788
Score = 31.5 bits (68), Expect(2) = 0.068
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 671 PXPQXXQXKKGXPGGGGXXXPPPPKKXXXXXPPPGGGPPP 790
P P P GG PPPP PPP PPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.49
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +2
Query: 812 KXPPQKPPGXGXXXPNPXGXKXPPPPLPPXXXXGXFXXNPPRXTXXGGGGXPPP 973
K PP PP P P P P PP G PP G G PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPA----PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +1
Query: 817 PPPKTPXXGXXXXQPXGXXKXPPPPPPPXXXGG 915
PPP P G P PPPPPPP G
Sbjct: 761 PPPPPPPPGVAGAGPP-----PPPPPPPAVSAG 788
Score = 27.1 bits (57), Expect = 6.0
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +2
Query: 743 KKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPLPPXXXXGXFX 922
+K PPP PPP P P P P PPPP PP
Sbjct: 725 QKLLLKSPPP---PPPAVIV-----PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
Query: 923 XNPPRXTXXGGGG 961
PP GG
Sbjct: 777 PPPPPPPAVSAGG 789
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 536 PPPPPXXKXPPPPXGGXGXXKNXPP 610
PPP P PPPP G PP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPP 776
Score = 20.6 bits (41), Expect(2) = 0.068
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 536 PPPPPXXKXPPPP 574
PPPPP P P
Sbjct: 732 PPPPPPAVIVPTP 744
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.5 bits (73), Expect = 0.069
Identities = 29/80 (36%), Positives = 29/80 (36%), Gaps = 1/80 (1%)
Frame = -2
Query: 770 GGGXGXXFFXGGXGXXXPPPXGPLFXFXXFGG-GXXXIFXPXPPPXGGGAXXPPXGGXFF 594
GGG G F GG G P P G F FGG G GGG G F
Sbjct: 187 GGGFGG--FGGGSGGPPPGPGG----FGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 593 XXPPPXXGGGXFXAXGGGGG 534
P GGG GG GG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGG 260
Score = 30.7 bits (66), Expect = 0.49
Identities = 21/53 (39%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -1
Query: 969 GGXPPPPXWVXR-GGFXKKXPXXXX-GGRGGGGFXXPXGLGXXXPXPGGFWGG 817
GG PP P GGF + GG GGG G G PGGF GG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 897 GGRGGGGFXXPXGLGXXXPXPGGFWGG 817
GG GGG GLG PGGF GG
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 27.9 bits (59), Expect = 3.4
Identities = 29/90 (32%), Positives = 29/90 (32%), Gaps = 1/90 (1%)
Frame = -1
Query: 894 GRGGGGFXX-PXGLGXXXPXPGGFWGGXFXXFXFXXXXXXXXXXGXXXXXFXGGGGXXXP 718
G GGGF G G P PGGF GG G F GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGF-GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 717 PPPGXPFXFXXFWGXGPXDFXPXAPPXXGG 628
P G F G GP F P GG
Sbjct: 243 GPGGFGGGLGGF-GGGPGGFG-GGPGGHGG 270
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -1
Query: 747 FXGGGGXXXPPPPGXPFXFXXFWGXGPXDFXPXAPPXXGGGXXPPXGG 604
F G GG PPPG P F F G G GGG GG
Sbjct: 190 FGGFGGGSGGPPPG-PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.1 bits (72), Expect = 0.092
Identities = 29/120 (24%), Positives = 30/120 (25%)
Frame = +2
Query: 536 PPPPPXXKXPPPPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQXKKGXPGG 715
P P P PP P PP P P P
Sbjct: 1122 PVPKPSVAAPPVPV-----PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 716 GGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPLP 895
G PP PK P P P PP PP P P PP P+P
Sbjct: 1177 G---IPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG-LPPVPVP 1232
Score = 30.3 bits (65), Expect = 0.65
Identities = 27/120 (22%), Positives = 27/120 (22%)
Frame = +2
Query: 536 PPPPPXXKXPPPPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQXKKGXPGG 715
PP P PP P G PP P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKP--- 1097
Query: 716 GGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPLP 895
PP PK P P P PP P P P PP P P
Sbjct: 1098 -SVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVA-APPVPAP 1155
Score = 28.7 bits (61), Expect = 2.0
Identities = 20/75 (26%), Positives = 21/75 (28%)
Frame = +2
Query: 671 PXPQXXQXKKGXPGGGGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXX 850
P P+ P G P P P P G PP PP P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP--VPKPSVAAPPVPAPSGAPP 1160
Query: 851 XPNPXGXKXPPPPLP 895
P P PP P P
Sbjct: 1161 VPKPSVA-APPVPAP 1174
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.0 bits (52), Expect(2) = 0.35
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 880 PPPPPPPXXXGGFF 921
PPPPPPP F+
Sbjct: 306 PPPPPPPPPSNDFW 319
Score = 24.6 bits (51), Expect(2) = 0.35
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +1
Query: 865 GXXKXPPPPPPP 900
G PPPPPPP
Sbjct: 303 GGLPPPPPPPPP 314
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.85
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +2
Query: 764 PP--PGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGX-KXPPPPLP 895
PP P PP PP P P P G PPPPLP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 1.5
Identities = 19/68 (27%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Frame = +2
Query: 776 GGPPPXXXXKXXKXPPQK--PPGXGXXXPNPXGXKXPPPPLPPXXXXGXFXXNPPRXTXX 949
GG P PQ PP P P PPPP P G PP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Query: 950 GGGGXPPP 973
P P
Sbjct: 1739 SAPSVPNP 1746
Score = 28.7 bits (61), Expect = 2.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +2
Query: 734 PPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPP 835
PP PPP PPP PP PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +2
Query: 731 PPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNP 862
P PP PPP PP PP P PNP
Sbjct: 1705 PTPPPPPMSVPPPPSA--PPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 1.5
Identities = 22/85 (25%), Positives = 24/85 (28%), Gaps = 4/85 (4%)
Frame = +2
Query: 731 PPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPP--LPPXX 904
PPPP P P+ PP +P PPPP LPP
Sbjct: 191 PPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQS 250
Query: 905 XXGXFXXNPPRXTXXGGG--GXPPP 973
P R G PPP
Sbjct: 251 TNTSQLPMPSRNVNNLGSQVNIPPP 275
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Frame = +2
Query: 527 PXXPPP---PPXXKXPPPPXGGXGXXKNXPP 610
P PPP PP PPPP G KN P
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -2
Query: 140 KXKKRXKXKXXKXKKKKK-KXKXKKXKKKK 54
K +KR K + K KK+KK K K KK KKKK
Sbjct: 444 KEEKRRKKEAKKEKKEKKEK-KEKKEKKKK 472
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 107 KXKKKKKKXKXKKXKKKKK 51
K KKKKKK KK K K+K
Sbjct: 436 KKKKKKKKNNKKKKKNKRK 454
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +2
Query: 671 PXPQXXQXKKGXPGGGGXXXPPPPKKXXXXXPPPGGGP 784
P Q G G G PPPP PPPG P
Sbjct: 109 PLGQAPVGLAGPVRGVGYTAPPPPAGFGRGAPPPGFRP 146
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 8.0
Identities = 18/72 (25%), Positives = 21/72 (29%), Gaps = 4/72 (5%)
Frame = +2
Query: 731 PPPPKKXXXXXPPPGGGPPPXXXXKXXKXP----PQKPPGXGXXXPNPXGXKXPPPPLPP 898
PPPP P PPP + P + PP PNP P P+
Sbjct: 909 PPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAA 968
Query: 899 XXXXGXFXXNPP 934
PP
Sbjct: 969 ASRISSSPNMPP 980
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,084,165
Number of Sequences: 5004
Number of extensions: 51747
Number of successful extensions: 425
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 753140462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -