Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B14
         (1365 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    35   0.006
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            33   0.014
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.69 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   2.9  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 34.7 bits (76), Expect = 0.006
 Identities = 29/104 (27%), Positives = 36/104 (34%), Gaps = 8/104 (7%)
 Frame = +2

Query: 671 PXPQXXQX--KKGXPGGGGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXG 844
           P PQ  +     G P  G    P PP+       PP G P P          P   PG  
Sbjct: 187 PGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPP-GVPMPMRPQMPPGAVPGMQPGMQ 245

Query: 845 XXXPNPXGXKXP-----PPPL-PPXXXXGXFXXNPPRXTXXGGG 958
              P+  G + P     PPP+ PP    G      P+ +   GG
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGG 289



 Score = 31.1 bits (67), Expect = 0.077
 Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
 Frame = +2

Query: 767 PPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPP-PPLPPXXXXGXFXXNPPRXT 943
           PPG   PP          PQ PP  G   P P G   P  P +PP    G      PR  
Sbjct: 194 PPGNVGPPRTGTPTQ---PQ-PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPP 249

Query: 944 XXGGGGXPP 970
              G   PP
Sbjct: 250 SAQGMQRPP 258



 Score = 27.5 bits (58), Expect = 0.95
 Identities = 37/161 (22%), Positives = 41/161 (25%), Gaps = 17/161 (10%)
 Frame = +2

Query: 539 PPPPXXKXPP----PPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQX---K 697
           PP P    PP    PP  G       P  GG                 P          +
Sbjct: 186 PPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQ 245

Query: 698 KGXPGGGGXXXPPPPKKXXXXXPP-PGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXK 874
              P   G   PP   +     PP P GGP P    +        P G       P   +
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQ 305

Query: 875 XPPPPLPPXXXXGXF---------XXNPPRXTXXGGGGXPP 970
              P  PP      F            PP      GGG PP
Sbjct: 306 GGAPGGPPQGMRPNFYNRPMGDPQTSRPPSGNDNMGGGPPP 346



 Score = 26.2 bits (55), Expect = 2.2
 Identities = 33/137 (24%), Positives = 39/137 (28%), Gaps = 10/137 (7%)
 Frame = +1

Query: 817  PPPKTPXXGXXXXQPXGXXKXP----PPPPPPXXXGGFFXKXXXXXXXRGGGXXPPXXGG 984
            P P  P  G    +P G    P    P  P P   GG + +             PP    
Sbjct: 181  PNPGMPP-GPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRP-QMPPGAVP 238

Query: 985  GXQXXXQKKXXG--GXXXXXFFXXPPRXKXXXXPGGAXXXXXXXXXX--GGXPPXXXGPP 1152
            G Q   Q +     G         PP  +     GG             GG P    GPP
Sbjct: 239  GMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPP 298

Query: 1153 KKXXKKXXGPP--PPXG 1197
            +       G P  PP G
Sbjct: 299  RPPMPMQGGAPGGPPQG 315



 Score = 24.2 bits (50), Expect = 8.9
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 1129 PPXXXGPPKKXXKKXXGPPPPXGXF 1203
            PP   GPP+        PP P G +
Sbjct: 194  PPGNVGPPRTGTPTQPQPPRPGGMY 218


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 33.5 bits (73), Expect = 0.014
 Identities = 29/101 (28%), Positives = 30/101 (29%), Gaps = 13/101 (12%)
 Frame = +2

Query: 710 GGGGXXXPPPPKKXXXXXPPPGGGPPPXXXXKXXKXP------------PQKPPGXGXXX 853
           GG     PPPP        PP   PPP    +    P            P  P       
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPA 584

Query: 854 PNPXGXKXPPP-PLPPXXXXGXFXXNPPRXTXXGGGGXPPP 973
           P P     PPP PL      G     PP     G GG  PP
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 28.7 bits (61), Expect = 0.41
 Identities = 31/115 (26%), Positives = 33/115 (28%)
 Frame = +2

Query: 548 PXXKXPPPPXGGXGXXKNXPPXGGXXXXXXXXXXXXXXXXXPXPQXXQXKKGXPGGGGXX 727
           P    PPPP G  G   N PP                      P   +   G P      
Sbjct: 527 PLGPPPPPPPG--GAVLNIPP----QFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQ 580

Query: 728 XPPPPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPL 892
            PP P       PPP  GPPP         P   P G     PN  G     PP+
Sbjct: 581 PPPAP------PPPPPMGPPP---SPLAGGPLGGPAGSRPPLPNLLGFGGAAPPV 626



 Score = 28.3 bits (60), Expect = 0.54
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = +2

Query: 527 PXXPPPPPXXKXPPPPXGG 583
           P  PPPPP    PP P  G
Sbjct: 582 PPAPPPPPPMGPPPSPLAG 600



 Score = 27.9 bits (59), Expect = 0.72
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
 Frame = +2

Query: 527 PXXPPPPPXXKXPPPPXGG--XGXXKNXPP 610
           P  PPPPP    P P  GG   G   + PP
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.0 bits (52), Expect(2) = 0.69
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 865 GXXKXPPPPPPP 900
           G    PPPPPPP
Sbjct: 779 GIGSPPPPPPPP 790



 Score = 21.0 bits (42), Expect(2) = 0.69
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +1

Query: 880 PPPPPPPXXXGG 915
           PPPPP     GG
Sbjct: 787 PPPPPSSLSPGG 798


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 2.9
 Identities = 15/54 (27%), Positives = 16/54 (29%)
 Frame = +2

Query: 737 PPKKXXXXXPPPGGGPPPXXXXKXXKXPPQKPPGXGXXXPNPXGXKXPPPPLPP 898
           PPK      PP    PP           P    G     P P     PPP + P
Sbjct: 71  PPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVP 124


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 3.8
 Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = +1

Query: 580 GGGXXKKXPPXGGXXA--PPPXGGGXGXKIXXXPPPKXXKXKRGPXGGG 720
           GGG     P  GG  +  P P GGG G         +  + + G  GGG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 25.0 bits (52), Expect = 5.1
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -1

Query: 897 GGRGGGGFXXPXGLGXXXPXPGGFWGG 817
           GG  GGG     G     P PGG  GG
Sbjct: 204 GGGSGGGAPGGGGGSSGGPGPGGGGGG 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 921,813
Number of Sequences: 2352
Number of extensions: 21387
Number of successful extensions: 168
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 157274865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)