Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B13
(1350 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011234-1|AAH11234.1| 238|Homo sapiens survival motor neuron d... 44 0.001
AL360182-9|CAI15482.1| 238|Homo sapiens survival motor neuron d... 44 0.001
AF107463-1|AAC84148.1| 238|Homo sapiens splicing factor protein. 44 0.001
AF083385-1|AAC64086.1| 238|Homo sapiens 30kDa splicing factor p... 44 0.001
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 43 0.002
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 43 0.002
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 43 0.002
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 43 0.002
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 43 0.002
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 43 0.002
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 43 0.002
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 43 0.002
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 43 0.002
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 43 0.002
BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein. 36 0.45
AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens ... 36 0.45
AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing... 36 0.45
BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein pr... 33 1.8
BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing... 33 1.8
BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing... 33 1.8
AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing... 33 1.8
AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing... 33 1.8
AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens ... 33 1.8
BC063133-1|AAH63133.1| 1045|Homo sapiens TDRD1 protein protein. 32 4.1
>BC011234-1|AAH11234.1| 238|Homo sapiens survival motor neuron
domain containing 1 protein.
Length = 238
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 390 SSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKP 566
+S + WK G C AV+ DG YEA I + + + F GY N+E+ PL LKP
Sbjct: 65 ASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKP 124
>AL360182-9|CAI15482.1| 238|Homo sapiens survival motor neuron
domain containing 1 protein.
Length = 238
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 390 SSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKP 566
+S + WK G C AV+ DG YEA I + + + F GY N+E+ PL LKP
Sbjct: 65 ASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKP 124
>AF107463-1|AAC84148.1| 238|Homo sapiens splicing factor protein.
Length = 238
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 390 SSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKP 566
+S + WK G C AV+ DG YEA I + + + F GY N+E+ PL LKP
Sbjct: 65 ASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKP 124
>AF083385-1|AAC64086.1| 238|Homo sapiens 30kDa splicing factor
protein.
Length = 238
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 390 SSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDT-ECVVRFLGYENSELVPLNALKP 566
+S + WK G C AV+ DG YEA I + + + F GY N+E+ PL LKP
Sbjct: 65 ASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLNLKP 124
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 256 DADALGSMLISWYMSGYHTGYYMGFRQNQK 285
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 256 DADALGSMLISWYMSGYHTGYYMGFRQNQK 285
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 76 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 135
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 136 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 175
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 255 DADALGSMLISWYMSGYHTGYYMGFRQNQK 284
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 256 DADALGSMLISWYMSGYHTGYYMGFRQNQK 285
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 256 DADALGSMLISWYMSGYHTGYYMGFRQNQK 285
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 256 DADALGSMLISWYMSGYHTGYYMGFRQNQK 285
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 256 DADALGSMLISWYMSGYHTGYYMGFRQNQK 285
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 43.2 bits (97), Expect = 0.002
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = +3
Query: 369 KGKSRPTSSNKKETEWKAGMPCRAVYEGDGLEYEAFILRVISDTE-CVVRFLGYENSELV 545
K KS+ ++ +WK G C A++ DG Y A I + E CVV + GY N E
Sbjct: 77 KNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQ 136
Query: 546 PL-NALKP--SLGN--EERTRQIEEALQDNGDDGFGSQSP 650
L + L P + N E+ ++ E Q + D+ S+SP
Sbjct: 137 NLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSP 176
Score = 32.3 bits (70), Expect = 4.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 890 EQQAISSMLLXXYMXGYXTGLYQGMKXSKE 979
+ A+ SML+ YM GY TG Y G + +++
Sbjct: 256 DADALGSMLISWYMSGYHTGYYMGFRQNQK 285
>BC035010-1|AAH35010.1| 1179|Homo sapiens TDRD1 protein protein.
Length = 1179
Score = 35.5 bits (78), Expect = 0.45
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 423 GMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALK 563
G PC A + GDG Y A + ++ + V F+ Y N E V + L+
Sbjct: 766 GQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELR 812
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 417 KAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKP 566
+ G C A Y D Y A +L SDT+ V + Y N E +PL ++P
Sbjct: 992 RIGDACCAKYTSDDFWYRAVVLGT-SDTDVEVLYADYGNIETLPLCRVQP 1040
>AK024735-1|BAB14982.1| 713|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21082 fis, clone CAS02992. ).
Length = 713
Score = 35.5 bits (78), Expect = 0.45
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 423 GMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALK 563
G PC A + GDG Y A + ++ + V F+ Y N E V + L+
Sbjct: 297 GQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELR 343
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 417 KAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKP 566
+ G C A Y D Y A +L SDT+ V + Y N E +PL ++P
Sbjct: 523 RIGDACCAKYTSDDFWYRAVVLGT-SDTDVEVLYADYGNIETLPLCRVQP 571
>AF285606-1|AAK31985.1| 777|Homo sapiens tudor domain containing
protein 1 protein.
Length = 777
Score = 35.5 bits (78), Expect = 0.45
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 423 GMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALK 563
G PC A + GDG Y A + ++ + V F+ Y N E V + L+
Sbjct: 363 GQPCCAFFAGDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELR 409
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 417 KAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKP 566
+ G C A Y D Y A +L SDT+ V + Y N E +PL ++P
Sbjct: 589 RIGDACCAKYTSDDFWYRAVVLGT-SDTDVEVLYADYGNIETLPLCRVQP 637
>BX537910-1|CAD97894.1| 651|Homo sapiens hypothetical protein
protein.
Length = 651
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 WKAGMPCRAVYEGDGLEYEAFILRVISD-TECVVRFLGYENSELVPLNALKP 566
WK G C A+Y D Y A + + S VV+F+ Y N E V L+ +KP
Sbjct: 556 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 607
>BC060876-1|AAH60876.1| 650|Homo sapiens tudor domain containing 3
protein.
Length = 650
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 WKAGMPCRAVYEGDGLEYEAFILRVISD-TECVVRFLGYENSELVPLNALKP 566
WK G C A+Y D Y A + + S VV+F+ Y N E V L+ +KP
Sbjct: 555 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 606
>BC030514-1|AAH30514.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 WKAGMPCRAVYEGDGLEYEAFILRVISD-TECVVRFLGYENSELVPLNALKP 566
WK G C A+Y D Y A + + S VV+F+ Y N E V L+ +KP
Sbjct: 556 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 607
>AL512666-2|CAH74000.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 WKAGMPCRAVYEGDGLEYEAFILRVISD-TECVVRFLGYENSELVPLNALKP 566
WK G C A+Y D Y A + + S VV+F+ Y N E V L+ +KP
Sbjct: 556 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 607
>AL354764-2|CAH72281.1| 651|Homo sapiens tudor domain containing 3
protein.
Length = 651
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 WKAGMPCRAVYEGDGLEYEAFILRVISD-TECVVRFLGYENSELVPLNALKP 566
WK G C A+Y D Y A + + S VV+F+ Y N E V L+ +KP
Sbjct: 556 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 607
>AK024660-1|BAB14950.1| 651|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21007 fis, clone CAE03871. ).
Length = 651
Score = 33.5 bits (73), Expect = 1.8
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 414 WKAGMPCRAVYEGDGLEYEAFILRVISD-TECVVRFLGYENSELVPLNALKP 566
WK G C A+Y D Y A + + S VV+F+ Y N E V L+ +KP
Sbjct: 556 WKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSNIKP 607
>BC063133-1|AAH63133.1| 1045|Homo sapiens TDRD1 protein protein.
Length = 1045
Score = 32.3 bits (70), Expect = 4.1
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 417 KAGMPCRAVYEGDGLEYEAFILRVISDTECVVRFLGYENSELVPLNALKP 566
+ G C A Y D Y A +L SDT+ V + Y N E +PL ++P
Sbjct: 857 RIGDACCAKYTSDDFWYRAVVLGT-SDTDVEVLYADYGNIETLPLCRVQP 905
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,695,303
Number of Sequences: 237096
Number of extensions: 2244426
Number of successful extensions: 3638
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3618
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19512051704
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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