Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B12
(1326 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 131 3e-29
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 105 3e-21
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 90 1e-16
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 78 6e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 1e-12
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 73 1e-11
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 70 2e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 65 4e-09
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 62 4e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 5e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 48 7e-04
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 46 0.003
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 42 0.027
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 42 0.027
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.15
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 38 0.44
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 131 bits (317), Expect = 3e-29
Identities = 61/79 (77%), Positives = 62/79 (78%)
Frame = +1
Query: 736 PWKAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSXAPSWAVCTNXXXXX 915
P +APSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRS APSWAVCTN
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Query: 916 XXXXXXVTIVXXPTR*XTT 972
VTIV PTR TT
Sbjct: 109 TAAPYPVTIVLSPTRKDTT 127
Score = 83.8 bits (198), Expect = 9e-15
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +3
Query: 594 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLES 746
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLE+
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA 52
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 105 bits (251), Expect = 3e-21
Identities = 62/105 (59%), Positives = 67/105 (63%)
Frame = +3
Query: 426 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 605
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 606 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 740
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 90.2 bits (214), Expect = 1e-16
Identities = 46/89 (51%), Positives = 52/89 (58%)
Frame = -1
Query: 969 RVLPGWXXDDSYRIRXXGRAERGVXAHSPAWSXRPTPN*DTYSVSYEKAPRFPKGERRTG 790
RV PGW DDSYR RAERGV A+SPAWS RP P+ DT SVSYEKAPRFPKG++
Sbjct: 5 RVRPGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ 64
Query: 789 IR*AAGSEQESARGSFPGGNAWYLYSPVG 703
+ A G + SPVG
Sbjct: 65 VSGKRQGRNRRAHEGAAGEKSPASLSPVG 93
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 77.8 bits (183), Expect = 6e-13
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 753 VRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 863
+RSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 76.6 bits (180), Expect = 1e-12
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 612 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 740
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 73.3 bits (172), Expect = 1e-11
Identities = 31/40 (77%), Positives = 32/40 (80%)
Frame = -1
Query: 975 ISRVLPGWXXDDSYRIRXXGRAERGVXAHSPAWSXRPTPN 856
+ R LPGW DDSYRIR GRAERGV AHSPAWS RPTPN
Sbjct: 3 LRRALPGWTQDDSYRIRRSGRAERGVRAHSPAWSERPTPN 42
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 69.7 bits (163), Expect = 2e-10
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +3
Query: 891 VHXPPVQPDRXALSGNYRLXSNPVXHDLSPLAAATG 998
+H PPVQPDR ALSGNYRL SNPV HDLSPLAAATG
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATG 36
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.9 bits (151), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 602 PFAGLLLTCSFLXYPLILWITVLPPLSELIPLAAAERP 489
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 61.7 bits (143), Expect = 4e-08
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -1
Query: 969 RVLPGWXXDDSYRIRXXGRAERGVXAHSPAWSXRPTPN*DT 847
R PGW +SYRIR RAERGV A+SPAWS RPTP+ DT
Sbjct: 5 RAFPGWTQVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 5e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 402 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 569
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 47.6 bits (108), Expect = 7e-04
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 501 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 674
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 675 IDAQVRGGETRQDYKDTRRFPLES 746
I Q + +T+ +YK T FPL+S
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQS 105
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 45.6 bits (103), Expect = 0.003
Identities = 30/82 (36%), Positives = 34/82 (41%)
Frame = +1
Query: 715 IKIPGVSPWKAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSXAPSWAVC 894
+KI VS P P PPFSL + + GIS RCRS APSWAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCRSFAPSWAVS 91
Query: 895 TNXXXXXXXXXXXVTIVXXPTR 960
N VT+ PTR
Sbjct: 92 KNPPFSPTAAPYPVTVHLSPTR 113
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 42.3 bits (95), Expect = 0.027
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 521 HSKAVIRLSTESGDNXGKNM 580
HSKAVIRLSTESGDN GKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 42.3 bits (95), Expect = 0.027
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 205 DPDMIRYIDEXGQTTTRMQ 261
DPDMIRYIDE GQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.15
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 472 ERGSGRAPNTQTASPRALADSLMQ 401
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 38.3 bits (85), Expect = 0.44
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 400 SALMNRPTXGERRFAYW 450
+ALMNRPT GERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,006,798,041
Number of Sequences: 1657284
Number of extensions: 18248971
Number of successful extensions: 45668
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 43557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45633
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 136868624542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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