Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B12
         (1326 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.72 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   5.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   6.8  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   6.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.72
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 720 DTRRFPLESSLVRSPVPTLPLTGYLSAF 803
           D+RR PL  ++ + P P  P+  Y  +F
Sbjct: 76  DSRRLPLRDAVEKRPPPDEPIDDYEPSF 103


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 265 KKCFICEIXDAIALFVTIISCNKQVN 342
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 288 NFTNKAFFSLH 256
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 288 NFTNKAFFSLH 256
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 286 IXDAIALFVTIISCNKQVNNNNCIHFMFQ 372
           I   +A+F+    C++    +NC+   FQ
Sbjct: 323 INAGLAIFILYFICDEAHYASNCLRVQFQ 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,238
Number of Sequences: 336
Number of extensions: 4198
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 39254702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)