Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_B06
(1226 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 34 0.24
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 32 0.72
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.72
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 31 2.2
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 6.7
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 29 6.7
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 6.7
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 6.7
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 6.7
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 6.7
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 29 8.9
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 29 8.9
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 29 8.9
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 29 8.9
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 33.9 bits (74), Expect = 0.24
Identities = 28/77 (36%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +1
Query: 553 PLTTNPR-FRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAE 729
P T PR RP TE + V T P E P TEV E P E + P EV
Sbjct: 581 PKTEAPRTVRPKTEAPMTVPPR-TEPPMTEAPRTEVPMTEPPKTEPPRTAPPRTEVSMTL 639
Query: 730 DPPMEVAIHMEAINIQV 780
PP V + EA +V
Sbjct: 640 -PPETVPPNTEAPRTEV 655
Score = 29.5 bits (63), Expect = 5.1
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = +1
Query: 553 PLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 732
P T PR P T RP E P T + E P E + E P E + E
Sbjct: 566 PRTEAPRTEPPRTEPPKTEAPRTVRPKTEAPMTVPPRTEPPMTEAPRTEVPMTEPPKTEP 625
Query: 733 P 735
P
Sbjct: 626 P 626
Score = 29.5 bits (63), Expect = 5.1
Identities = 20/65 (30%), Positives = 24/65 (36%)
Frame = +1
Query: 553 PLTTNPRFRPATEFLLAVTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVQQAED 732
P T PR P + T P+ E P TEV P E + E P + E
Sbjct: 621 PKTEPPRTAPPRTEVSMTLPPETVPPNTEAPRTEVPMTVPPRTEPPKTEAPRTVPPKTEA 680
Query: 733 PPMEV 747
P EV
Sbjct: 681 PMTEV 685
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 32.3 bits (70), Expect = 0.72
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Frame = +1
Query: 439 HILHARRSPLSKDRM--QQNRRNLSQWLQNRKHQLLISTRP-LTTNPRFRPATEFLLAVT 609
+++H + + ++++ Q++ N+S+ Q + STR ++ P RP +
Sbjct: 132 YVMHQKINEFIREQLKKQKSNENVSEMSQRSAPRTAASTRTAISAPPPPRPPPQEPPKPV 191
Query: 610 HHMTARPHMEVPPTEVHQVEDP-PMEVQQAEDPPMEVQQAEDPPME 744
P P V + +P P V+Q PP VQ P+E
Sbjct: 192 EQAAPPPPPAPMPVPVEKAPEPVPAPVEQIAPPPAPVQDPAPAPVE 237
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 32.3 bits (70), Expect = 0.72
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 628 PHMEVPPTEVHQVEDPPME--VQQAEDPPMEVQQAEDP 735
P V P+E HQ PP V +EDP V+ +EDP
Sbjct: 133 PQPSVEPSEDHQPSGPPSPGPVDPSEDPQPSVEPSEDP 170
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 30.7 bits (66), Expect = 2.2
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 354 CXXIGCLNSEVCVLAEAPCTFGHTSNCGTYPTCKKKSLVEG 476
C + C N++VC+L +A C C PTC+K G
Sbjct: 1805 CEHVECPNAQVCILRKADCP---NKWCLPVPTCEKSPCNSG 1842
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 649 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 795
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 3274 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 3325
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 649 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 795
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 1088 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 1139
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 661 QVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAINIQVDRQE 792
+ DPP +A+DPP + PP + + +EA ++ Q+
Sbjct: 927 EASDPPSTSTEAQDPPKPSSSSAPPPPKKKLGLEAAISKIRGQQ 970
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.1 bits (62), Expect = 6.7
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 661 QVEDPPMEVQQAEDPPMEVQQAEDPPMEVAIHMEAINIQVDRQE 792
+ DPP +A+DPP + PP + + +EA ++ Q+
Sbjct: 927 EASDPPSTSTEAQDPPKPSSSSAPPPPKKKLGLEAAISKIRGQQ 970
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 649 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 795
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 3274 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 3325
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.1 bits (62), Expect = 6.7
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 649 TEVHQVEDPPMEVQQAEDPPMEVQQAE---DPPMEVAIHMEAINIQVDRQEG 795
T E+P E + DPP+ V A+ P E H E++++ R +G
Sbjct: 3274 TTTTTTEEPTEEPAEMRDPPVTVTNAKRESSTPFEFPDHFESVDLSPARPDG 3325
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = -2
Query: 547 SKSRVGVCGFGAIGLGCVGSAACDPST------RDFFLHVGYVPQLLVWPNVHGASASTQ 386
SK+ VG+ GFG IG V AA + T D F+ + Y+ L + + HG T
Sbjct: 2 SKANVGINGFGRIG-RLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTV 60
Query: 385 T 383
T
Sbjct: 61 T 61
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = -2
Query: 547 SKSRVGVCGFGAIGLGCVGSAACDPST------RDFFLHVGYVPQLLVWPNVHGASASTQ 386
SK+ VG+ GFG IG V AA + T D F+ + Y+ L + + HG T
Sbjct: 2 SKANVGINGFGRIG-RLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTV 60
Query: 385 T 383
T
Sbjct: 61 T 61
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = -2
Query: 547 SKSRVGVCGFGAIGLGCVGSAACDPST------RDFFLHVGYVPQLLVWPNVHGASASTQ 386
SK+ VG+ GFG IG V AA + T D F+ + Y+ L + + HG T
Sbjct: 2 SKANVGINGFGRIG-RLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTV 60
Query: 385 T 383
T
Sbjct: 61 T 61
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = -2
Query: 547 SKSRVGVCGFGAIGLGCVGSAACDPST------RDFFLHVGYVPQLLVWPNVHGASASTQ 386
SK+ VG+ GFG IG V AA + T D F+ + Y+ L + + HG T
Sbjct: 2 SKANVGINGFGRIG-RLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTV 60
Query: 385 T 383
T
Sbjct: 61 T 61
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 28.7 bits (61), Expect = 8.9
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = -2
Query: 547 SKSRVGVCGFGAIGLGCVGSAACDPST------RDFFLHVGYVPQLLVWPNVHGASASTQ 386
SK+ VG+ GFG IG V AA + T D F+ + Y+ L + + HG T
Sbjct: 2 SKANVGINGFGRIG-RLVLRAAVEKDTVQVVAVNDPFITIDYMVYLFKYDSTHGQFKGTV 60
Query: 385 T 383
T
Sbjct: 61 T 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,756,526
Number of Sequences: 27780
Number of extensions: 329342
Number of successful extensions: 1231
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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