Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B02
         (1235 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   8.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   8.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 193  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 285
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 193  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 285
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 193  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 285
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 193  LTSCTLITHTIIMEDKASLKELDQWIQQLNE 285
            L  C L TH    ++KASL  +   ++ LN+
Sbjct: 1116 LFKCMLCTHQKAGDEKASLINIADSLEMLNK 1146


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 502 YSVETVTLLVALKVRYRERITILRGNHES 588
           YS E   + +  +  Y ERI+++ G HE+
Sbjct: 190 YSCEYNLVWIKEESIYEERISVVSGLHEA 218


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 661 HFTDLFDFLPLTALVDGQIFCLH 729
           + T +F FLP+ +   GQ  CL+
Sbjct: 20  NLTKIFGFLPVCSSQKGQKTCLN 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,388
Number of Sequences: 336
Number of extensions: 5275
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36171872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)