Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_B02
         (1235 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismuta...    26   2.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   6.0  
EF519512-1|ABP73575.1|  250|Anopheles gambiae APL2 protein.            24   7.9  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    24   7.9  

>AY505417-1|AAR90328.1|  206|Anopheles gambiae superoxide dismutase
           1 protein.
          Length = 206

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 794 CPTKDPCAISSGVIPMTEVD 853
           CP +DP   ++G++P+  +D
Sbjct: 171 CPNQDPLEATTGLVPLLGID 190


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +1

Query: 226 IMEDKASLKELDQWIQQLNECKQLTENQVKTL 321
           + + K   KEL+ WIQ+  E ++  E   K +
Sbjct: 891 LKQQKTLQKELESWIQKEKEAQEKLEEDGKRM 922


>EF519512-1|ABP73575.1|  250|Anopheles gambiae APL2 protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +3

Query: 585 IASDHSSVRLLRRVPPEIRQRVRLEALHRSIRFPALDGARRWTDILPARWTQSVNRHP 758
           I + H+ + ++R +PP +RQ V +    R++   A +G+      LP     SV+  P
Sbjct: 142 IDASHNKLSVVR-IPPNLRQLVAIGNGIRTVESTATNGSELILLKLPHNKLTSVDEVP 198


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 438 AEQFHQVVKLTVHVAAYGH 382
           A+  H+V+   VHV++Y H
Sbjct: 150 AQPVHKVIAQNVHVSSYAH 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,146,068
Number of Sequences: 2352
Number of extensions: 23142
Number of successful extensions: 86
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141017715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)