Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A24
         (1312 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.       34   0.37 
BT001400-1|AAN71155.1|  733|Drosophila melanogaster GH06606p pro...    34   0.50 
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical...    34   0.50 

>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
          Length = 2360

 Score = 34.3 bits (75), Expect = 0.37
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 80   RIXKTYPGSDGITRVAEVKTRTGTVVRGFNSICPL 184
            ++ K + G+D   RVA+VK + G + R    ICPL
Sbjct: 1719 KVEKVHKGNDDKVRVAKVKMQEGYITRPITKICPL 1753


>BT001400-1|AAN71155.1|  733|Drosophila melanogaster GH06606p
           protein.
          Length = 733

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 80  RIXKTYPGSDGITRVAEVKTRTGTVVRGFNSICPLPL 190
           RI   +PG+D   RV E++T  GT+ R  + +  LP+
Sbjct: 687 RIVSAFPGADERIRVVEIRTSRGTIKRPVHKVILLPM 723


>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
            protein protein.
          Length = 1830

 Score = 33.9 bits (74), Expect = 0.50
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +2

Query: 80   RIXKTYPGSDGITRVAEVKTRTGTVVRGFNSICPLPL 190
            RI   +PG+D   RV E++T  GT+ R  + +  LP+
Sbjct: 1784 RIVSAFPGADERIRVVEIRTSRGTIKRPVHKVILLPM 1820


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,534,907
Number of Sequences: 53049
Number of extensions: 317279
Number of successful extensions: 691
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 7110213645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)