Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_A15
(1276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.25
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.25
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.57
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.57
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.57
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 1.6
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 1.7
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 1.7
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 2.3
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 2.3
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 2.3
AF040661-5|AAG24212.1| 209|Caenorhabditis elegans Hypothetical ... 31 2.3
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 2.3
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 3.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 3.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 4.0
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 30 4.0
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 30 4.0
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 4.0
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 5.3
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 5.3
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 5.3
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 5.3
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 5.3
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 5.3
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 24 5.8
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 7.0
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 7.0
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 7.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 7.0
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 7.0
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 7.0
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 7.0
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 7.0
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 7.0
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 7.0
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 26 7.3
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 26 7.3
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 9.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 9.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 9.3
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPPP 923
GG G GGGG PPPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 24.6 bits (51), Expect(2) = 4.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 928 GGGGGGGXXXXXXPPPXGG 984
GGG GGG P P GG
Sbjct: 39 GGGCGGGGGCAPPPAPCGG 57
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 925 GGGGGGGG 948
GGGGGGGG
Sbjct: 26 GGGGGGGG 33
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPPP 923
GG G GGGG PPPPPPP
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 24.6 bits (51), Expect(2) = 4.5
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 928 GGGGGGGXXXXXXPPPXGG 984
GGG GGG P P GG
Sbjct: 39 GGGCGGGGGCAPPPAPCGG 57
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 925 GGGGGGGG 948
GGGGGGGG
Sbjct: 26 GGGGGGGG 33
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.57
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP GG PPPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 984 PPXGGGXXXXXXXPPPPPPP 925
PP GG PPPPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 984 PPXGGGXXXXXXXPPPPPPP 925
PP GG PPPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPP 764
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 982 PXGGGGXXXXXXPPPPPPPP 923
P GG PPPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.57
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP GG PPPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 984 PPXGGGXXXXXXXPPPPPPP 925
PP GG PPPPPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPP 748
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 984 PPXGGGXXXXXXXPPPPPPP 925
PP GG PPPPPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPP 764
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 982 PXGGGGXXXXXXPPPPPPPP 923
P GG PPPPPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.57
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP GG PPPPPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPP 348
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 984 PPXGGGXXXXXXXPPPPPPP 925
PP GG PPPPPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPP 331
Score = 30.3 bits (65), Expect = 3.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 984 PPXGGGXXXXXXXPPPPPPP 925
PP GG PPPPPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPP 347
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 982 PXGGGGXXXXXXPPPPPPPP 923
P GG PPPPPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPP 348
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 720 GXPPPPXGGGXXPPXXXXXXXXXPPP 797
G PPPP GG PP PPP
Sbjct: 278 GSPPPPPAGGSPPPPRAGSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 720 GXPPPPXGGGXXPPXXXXXXXXXPPP 797
G PPPP GG PP PPP
Sbjct: 299 GSPPPPPAGGSPPPPRAGSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 720 GXPPPPXGGGXXPPXXXXXXXXXPPP 797
G PPPP GG PP PPP
Sbjct: 284 GSPPPPPAGGSPPPPRAGSPPPPPPP 309
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect(2) = 1.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 947 PPPPPPPP 924
PPPPPPPP
Sbjct: 576 PPPPPPPP 583
Score = 23.0 bits (47), Expect(2) = 1.6
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPP 927
PP G PPPPP P
Sbjct: 540 PPPPVGMANGGPPPPPPLP 558
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 980 PXGGGXXXXXXPPPPPPP 927
P GGG PPPPPPP
Sbjct: 20 PSGGGGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 980 PXGGGXXXXXXPPPPPPP 927
P GGG PPPPPPP
Sbjct: 20 PSGGGGGCGCAPPPPPPP 37
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 980 PXGGGXXXXXXPPPPPPP 927
P GGG PPPPPPP
Sbjct: 20 PSGGGGGCGCAPPPPPPP 37
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPP 926
GG G GGGG PPPPPP
Sbjct: 30 GGCGGGCGGGGGCGGGGGCGGGCAPPPPPP 59
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPP 926
GG G GGGG PPPPPP
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPP 977
GG GGGGG PPPP
Sbjct: 40 GGCGGGGGCGGGCAPPPP 57
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPP 977
GG GGGGG PPPP
Sbjct: 97 GGCGGGGGCGGGCAPPPP 114
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 980 PXGGGXXXXXXPPPPPPPP 924
P GGG PPPPPP P
Sbjct: 20 PSGGGGGCGCAPPPPPPSP 38
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like (grd
related) protein29 protein.
Length = 172
Score = 30.7 bits (66), Expect = 2.3
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 1012 GXGXXXXXXXPXGGGGXXXXXXPPPPPPPP 923
G G G GG PPPPPPPP
Sbjct: 44 GGGCGYGGGGGCGYGGGYGCGIPPPPPPPP 73
>AF040661-5|AAG24212.1| 209|Caenorhabditis elegans Hypothetical
protein W10G11.3 protein.
Length = 209
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 495 KIIEYCSNFDQCEDTLSIIKYKIQSIVTYILTNNILCIYSK 373
K+IE C NF++C TL K+ +IV + T + C Y++
Sbjct: 76 KVIEICINFNRCRQTLDCQPDKVFAIV--VNTGLMFCEYAQ 114
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXG 983
GGGGGGGG PPP G
Sbjct: 34 GGGGGGGGCCAPPPPPPVCG 53
Score = 30.3 bits (65), Expect = 3.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +1
Query: 925 GGGGGGGGXXXXXXPPPXGG 984
GGGGGGGG PPP G
Sbjct: 34 GGGGGGGGCCAPPPPPPVCG 53
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPP 977
G GGGGGG PPPP
Sbjct: 32 GCGGGGGGGGCCAPPPPP 49
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPPP 923
GG G GGGG PP PP PP
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPP 649
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisomerase
III protein.
Length = 759
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPPP 923
GG G GGGG PP PP PP
Sbjct: 619 GGPGGGGGPPRGPGGGGGGGPTGPPAPPKPP 649
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical protein
T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXGXXXXXXXPXP 1013
GGGGGG G PPPP P P
Sbjct: 83 GGGGGGYGRPQGYVPPPPPPPTQPEPEPEP 112
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 4/24 (16%)
Frame = -1
Query: 982 PXGGGGXXXXXXP----PPPPPPP 923
P GGGG P PPPPPPP
Sbjct: 80 PYGGGGGGGYGRPQGYVPPPPPPP 103
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP G PPPPPPPP
Sbjct: 434 PPLQVGLVGRVPPPPPPPPP 453
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP G PPPPPPPP
Sbjct: 382 PPLQVGLVGRVPPPPPPPPP 401
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 4.0
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 924 GGGGGGGG---XXXXXXPPPPXGXXXXXXXPXPP 1016
GGGGGGGG PPPP P PP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPP 57
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP G PPPPPPPP
Sbjct: 637 PPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP G PPPPPPPP
Sbjct: 463 PPMGLPAVGAGAPPPPPPPP 482
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP G G PPPPPPPP
Sbjct: 240 PPVGAGAPP---PPPPPPPP 256
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP G G PPPPPPPP
Sbjct: 226 PPVGAGAPP---PPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP G G PPPPPPPP
Sbjct: 226 PPVGAGAPP---PPPPPPPP 242
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 5.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXG 983
G GG GGG PPPP G
Sbjct: 200 GSGGSGGGSGRFPPPPPPYG 219
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPP 929
GG G GG G PPPPPP
Sbjct: 189 GGGGGGMGGGGGSGGSGGGSGRFPPPPPP 217
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 947 PPPPPPP 927
PPPPPPP
Sbjct: 122 PPPPPPP 128
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 944 PPPPPPP 924
PPPPPPP
Sbjct: 138 PPPPPPP 144
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 974 GGGXXXXXXPPPPPPPP 924
G G PPPPPPPP
Sbjct: 525 GSGSNRRSGPPPPPPPP 541
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 973 GGGXXXXXXPPPPPPPP 923
G G PPPPPPPP
Sbjct: 525 GSGSNRRSGPPPPPPPP 541
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 924 GGG--GGGGGXXXXXXPPPPXGXXXXXXXPXP 1013
GGG GGGGG PPPP P P
Sbjct: 26 GGGYSGGGGGGGDAAPPPPPPADAAPAPAPAP 57
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 927 GGGGGGGXXXXXXPPPPXGXXXXXXXPXP 1013
GGGGGGG PPP P P
Sbjct: 31 GGGGGGGDAAPPPPPPADAAPAPAPAPEP 59
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPP 977
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPP 977
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPP 977
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPP 977
GGGGGGGG PP P
Sbjct: 338 GGGGGGGGLDPFTFPPTP 355
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPP 927
PP GGG PPPPPPP
Sbjct: 45 PPCGGGYEA---PPPPPPP 60
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 713 GXXXPPPPXGGGXXPPXXXXXXXXXXPPP 799
G PPPP GG PP PPP
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 726 PPPPXGGGXXPPXXXXXXXXXPPP 797
PPPP GG PP PPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPP 98
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXGXXXXXXXPXPP 1016
GGGGGGGG P P G P P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP 119
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXGXXXXXXXPXPP 1016
GGGGGGGG P P G P P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP 119
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXGXXXXXXXPXPP 1016
GGGGGGGG P P G P P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP 119
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXGXXXXXXXPXPP 1016
GGGGGGGG P P G P P
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKP 119
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPPP 923
GG P GG G PPPPPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFM---PPPPPPPP 681
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP GG PPPPPP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 1015 GGXGXXXXXXXPXGGGGXXXXXXPPPPPPPP 923
GG P GG G PPPPPPPP
Sbjct: 654 GGGSSMPMPVPPPGGLGGFM---PPPPPPPP 681
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 983 PPXGGGXXXXXXPPPPPPPP 924
PP GG PPPPPP P
Sbjct: 664 PPPGGLGGFMPPPPPPPPMP 683
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 29.1 bits (62), Expect = 7.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 931 GGGGGGXXXXXXPPPXGG 984
GGGGGG PPP GG
Sbjct: 22 GGGGGGCCAPPPPPPCGG 39
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 26.2 bits (55), Expect(2) = 7.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 970 GGXXXXXXPPPPPPP 926
GG PPPPPPP
Sbjct: 762 GGPVGVGVPPPPPPP 776
Score = 21.0 bits (42), Expect(2) = 7.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 940 PPPPPP 923
PPPPPP
Sbjct: 799 PPPPPP 804
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 26.2 bits (55), Expect(2) = 7.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -1
Query: 970 GGXXXXXXPPPPPPP 926
GG PPPPPPP
Sbjct: 762 GGPVGVGVPPPPPPP 776
Score = 21.0 bits (42), Expect(2) = 7.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -1
Query: 940 PPPPPP 923
PPPPPP
Sbjct: 799 PPPPPP 804
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical protein
F14F7.1 protein.
Length = 305
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 924 GGGGGGGGXXXXXXPPPPXGXXXXXXXPXPP 1016
GGGGGGGG P P G P P
Sbjct: 91 GGGGGGGGQCSTCCRPGPPGAGGTPGKPGRP 121
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = -1
Query: 976 GGGGXXXXXX--PPPPPPPP 923
GGGG PPPPPPPP
Sbjct: 51 GGGGSYAAAPALPPPPPPPP 70
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = -1
Query: 976 GGGGXXXXXX--PPPPPPPP 923
GGGG PPPPPPPP
Sbjct: 51 GGGGSYAAAPALPPPPPPPP 70
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,610,019
Number of Sequences: 27780
Number of extensions: 430334
Number of successful extensions: 8383
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3721
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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