Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A11
         (1253 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0518 + 18091601-18091750,18093501-18093549,18094734-180949...    33   0.36 
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826...    30   4.4  

>08_02_0518 +
           18091601-18091750,18093501-18093549,18094734-18094933,
           18095030-18095335
          Length = 234

 Score = 33.5 bits (73), Expect = 0.36
 Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
 Frame = +3

Query: 525 VFWTLLHYDRSLIFPAYLDKIITRLSNHVIHTMIVPVVVWE-VMFWPRKPKSH-YRNIAQ 698
           V W + H+   +   +  DK++    + V+  + + V+  E ++ +   P +   + +  
Sbjct: 27  VVWAV-HFRGGMALSSETDKLLIFNVHPVLMLIGLVVLNGEAILAYKTVPGTKKLKKLVH 85

Query: 699 LAIHMLAYIFVLHFTYHEHGVWLYPIFKAVQGTIHFYLLHFYVAAMCLMFYKLQW 863
           LA+  LA +  L       G+W    F   +   H Y LH ++   C++F+ LQW
Sbjct: 86  LALQFLAMLLSLI------GLWTVWKFHDERQIDHLYTLHSWLGLSCIIFFSLQW 134


>01_06_1758 -
           39681942-39682030,39682115-39682345,39682643-39682679,
           39683604-39683835,39683937-39684022,39684126-39684218,
           39684302-39684465,39684541-39684702,39684783-39684962,
           39685079-39685515,39685614-39685669
          Length = 588

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = -1

Query: 800 YRSLNCFEDR--VQPDAVLVISEM*HEDVRQHVYRQLRDVPVVTFRFPGPKHHLPDHDRN 627
           +RSL  FE    V+  AV  +S+M   DV Q  YR+ RD+ V     P P  +  + +  
Sbjct: 110 FRSLIPFEKNFYVECPAVQAMSDM---DVSQ--YRRQRDITVEGHDVPKPVRYFQEANFP 164

Query: 626 DHCMYDVVR 600
           D+CM  + +
Sbjct: 165 DYCMQAIAK 173


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,331,711
Number of Sequences: 37544
Number of extensions: 612553
Number of successful extensions: 1405
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1404
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3876004116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)