Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_A11
(1253 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical ... 56 5e-08
Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical pr... 51 2e-06
AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical ... 31 1.7
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 29 5.2
Z70309-7|CAB54292.1| 209|Caenorhabditis elegans Hypothetical pr... 29 6.9
AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical ... 29 9.1
>AC199167-2|ABO33246.1| 222|Caenorhabditis elegans Hypothetical
protein cTel55X.1a protein.
Length = 222
Score = 56.0 bits (129), Expect = 5e-08
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Frame = +3
Query: 396 TLCDLLVLLNRHKENYKLPKYLGSSREIIF----AGLVWPSSWVVFTVFWTLLHYD-RSL 560
T+ DL + L H + L + R IIF L P V +FW L +D +L
Sbjct: 44 TIIDLYMQLLYHTIGFILAVVSPNKRHIIFDYWARALTGPIGVAVTVLFWGLFLFDPATL 103
Query: 561 IFPAYLDKIITRL-SNHVIHTMIVPVVVWEVMFWPRKPKSHYRNIAQLAIHMLAYIFVLH 737
KI+T NH +HT+ ++ + S + +A+ + Y+ LH
Sbjct: 104 ARDEMAMKILTLFWFNHGLHTLPAITAHLDLAIYNHTSFSTSAILKGIAVFVTLYLIDLH 163
Query: 738 FTYHEHGVWLYPIFKAVQGTIHFYLLHFYVAAMCLMFYKLQW--WLNSVIHGVE 893
+ ++ G W YPI + + L F A M +++ W +L +++HGVE
Sbjct: 164 YVFYTSGFWAYPILGELAAP---FRLVFIAACMFIVYLGYVWLSFLGALVHGVE 214
>Z81046-5|CAB02823.1| 225|Caenorhabditis elegans Hypothetical
protein C37E2.2a protein.
Length = 225
Score = 54.4 bits (125), Expect = 2e-07
Identities = 30/130 (23%), Positives = 56/130 (43%)
Frame = +3
Query: 495 VWPSSWVVFTVFWTLLHYDRSLIFPAYLDKIITRLSNHVIHTMIVPVVVWEVMFWPRKPK 674
++P + +FW L + +L+ P ++ K+I NH+ HT + ++ + F R P
Sbjct: 78 IFPVGMITCGLFWGLYAINPALVMPDWIAKLIPSWLNHITHTYPIIFIILDSYFHKRTPP 137
Query: 675 SHYRNIAQLAIHMLAYIFVLHFTYHEHGVWLYPIFKAVQGTIHFYLLHFYVAAMCLMFYK 854
++ A + Y ++ + G WLYPI ++ HF + + M K
Sbjct: 138 KTIASLIFSAALVFVYFMIICYVRFFDGYWLYPIL-SLFAFEHFVISYIIGFLGFFMLIK 196
Query: 855 LQWWLNSVIH 884
LN + H
Sbjct: 197 AAVRLNKLFH 206
>Z81046-2|CAB02824.1| 295|Caenorhabditis elegans Hypothetical
protein C37E2.3 protein.
Length = 295
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/122 (18%), Positives = 64/122 (52%)
Frame = +3
Query: 495 VWPSSWVVFTVFWTLLHYDRSLIFPAYLDKIITRLSNHVIHTMIVPVVVWEVMFWPRKPK 674
++P + ++ +FW YD L+ PA++ +I+ NH+ HT ++ ++ + + R
Sbjct: 157 MFPVAVILCGMFWGFYVYDSDLVMPAWVAEIVPSWLNHINHTYLIVFILLDSYYHKRDAP 216
Query: 675 SHYRNIAQLAIHMLAYIFVLHFTYHEHGVWLYPIFKAVQGTIHFYLLHFYVAAMCLMFYK 854
S+ + +++ Y ++ + + +W+YP+ ++ +I +++ Y+ ++ + F
Sbjct: 217 SNSTSWMISVVYVTFYFIIVLGVKYYNRMWVYPVLQSF--SIDLFVIS-YILSVVIFFIL 273
Query: 855 LQ 860
L+
Sbjct: 274 LK 275
>AF038614-1|AAB92058.2| 1228|Caenorhabditis elegans Hypothetical
protein F15E6.6 protein.
Length = 1228
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 219 VLSIAMHMSNLLYIQYAILSANVSEESMENFGTGTFKNMEYRYFTTWTAGLKIGYAALGT 398
V+ A+++ + I LS N+ +E ++ F F + + F TWT G+ G + +
Sbjct: 293 VIGAAVNIQKMSDILSRSLSQNIGKE-VDAF-IKKFSSPQIANFATWTGGIVSGAKSSIS 350
Query: 399 LCDLLVLLN 425
+ DLL+L N
Sbjct: 351 VSDLLLLFN 359
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = +3
Query: 219 VLSIAMHMSNLLYIQYAILSANVSEESMENFGTGTFKNMEYRYFTTWTAGLKIGYAALGT 398
V+ A+++ + + LS N+ +E +++F F + + F TWT + G + +
Sbjct: 296 VVGAALNIQKMADTLTSSLSINIGKE-IDSF-IQKFSSPQIANFATWTGAIISGAKSSLS 353
Query: 399 LCDLLVLLN 425
+ DLL+L N
Sbjct: 354 VSDLLILFN 362
>Z70309-7|CAB54292.1| 209|Caenorhabditis elegans Hypothetical
protein R102.8 protein.
Length = 209
Score = 29.1 bits (62), Expect = 6.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +3
Query: 855 LQWWLNSVIHGVEXVEKXRFIXPAVGRSSYR 947
++WW + + G+E + + +F P G S+R
Sbjct: 94 IEWWEDDTMPGMEQITRPQFYHPKPGNFSFR 124
>AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical
protein ZC190.6 protein.
Length = 547
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +3
Query: 696 QLAIHMLAYIFVLHFTYHEHGVWLYPIFKAVQGTIHFYLLHFYVAAMCLMFYKLQWWLNS 875
Q AI ++AY +L+ + V L P F VQ T++F L+H + L+ + + + +
Sbjct: 233 QAAIWIIAYNNILNI----YAVIL-PFF-LVQSTVNFQLIHAKAQSPFLLLFSISLFFLA 286
Query: 876 VIHGVEXVE 902
+ HG + E
Sbjct: 287 LTHGFQIFE 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,994,521
Number of Sequences: 27780
Number of extensions: 531288
Number of successful extensions: 1152
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3485108972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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