Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_A09
         (1279 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0396 + 24915880-24916222,24916318-24916577,24916689-249167...    30   4.5  
01_06_0267 - 28022317-28022580,28023232-28023515,28024067-280244...    30   4.5  
02_05_0470 + 29303558-29303681,29303797-29303847,29304811-29305019     29   7.9  
01_03_0182 + 13537522-13539699                                         29   7.9  

>04_04_0396 +
           24915880-24916222,24916318-24916577,24916689-24916784,
           24916889-24917059,24917262-24917975
          Length = 527

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 19/65 (29%), Positives = 29/65 (44%)
 Frame = +2

Query: 470 PSLKANDIETSGILTLISVVFLLATFAVYTYFPNLRDLQGLCYMSMSISMALGFLSLGVL 649
           P++ A   +++G       V  L      T+ P   D+Q LC  S S+   LGF   G+L
Sbjct: 135 PAILALTAQSAGAAVADVTVDALVAQNSITHQPLAADMQSLCGFSSSVGALLGFSISGLL 194

Query: 650 QLNTG 664
             + G
Sbjct: 195 VHSMG 199


>01_06_0267 -
           28022317-28022580,28023232-28023515,28024067-28024463,
           28024563-28024736
          Length = 372

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = +2

Query: 800 RKQFLWYSCYAWGGTLALLFVAI-----ITTFVDGDHWKPGFG 913
           RK + WY  + W G LAL F AI     I     G+ WK G+G
Sbjct: 300 RKYWNWY--HHWVGRLALFFAAINIVLGIKVGAAGNSWKIGYG 340


>02_05_0470 + 29303558-29303681,29303797-29303847,29304811-29305019
          Length = 127

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = +2

Query: 665 FRQDLCTLTGFVVYTWMIATFFWMNVICINVCRSVLNASRLAKSDRKQFLWYS 823
           F +++C+    + +    +TFFW+N +  N   ++  A    K D    +W S
Sbjct: 75  FHKEVCSYDRIIEWLLARSTFFWINHLLFNYNYTLNYAHMKLKYDNTVHVWVS 127


>01_03_0182 + 13537522-13539699
          Length = 725

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
 Frame = +3

Query: 861 WPSLRPSSTETTGNQVLVNRVVG----STVAPKHGSFLRTIA 974
           WP  RP  + + G    VNR+VG    ++  PK  ++LR IA
Sbjct: 428 WPENRPRWSNSMGQYNCVNRLVGISPPTSCTPKIMTYLRNIA 469


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,746,080
Number of Sequences: 37544
Number of extensions: 613781
Number of successful extensions: 1509
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)